RNA–Protein interactions for RNA: ENST00000528781.1

AP001189.6-201, humanhuman

TSL 1 (best) BASIC

Gene AP001189.6, Length 831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001189.6-201ENST00000528781 MS4A3Q96HJ5 214 aa10.58□□□□□ -0.72
AP001189.6-201ENST00000528781 METRNQ9UJH8 293 aa10.58□□□□□ -0.72
AP001189.6-201ENST00000528781 C7P10643 843 aa10.57□□□□□ -0.72
AP001189.6-201ENST00000528781 SLC39A7Q92504 469 aa10.56□□□□□ -0.72
AP001189.6-201ENST00000528781 PCDH10Q9P2E7 1040 aa10.56□□□□□ -0.72
AP001189.6-201ENST00000528781 MAMSTRQ6ZN01 415 aa10.51□□□□□ -0.73
AP001189.6-201ENST00000528781 LCE2DQ5TA82 110 aaPredicted RBP10.49□□□□□ -0.73
AP001189.6-201ENST00000528781 ATN1P54259 1190 aaPredicted RBP10.46□□□□□ -0.73
AP001189.6-201ENST00000528781 CCDC61Q9Y6R9 512 aa10.46□□□□□ -0.73
AP001189.6-201ENST00000528781 TSPYL2Q9H2G4 693 aaPredicted RBP10.44□□□□□ -0.74
AP001189.6-201ENST00000528781 KIF12Q96FN5 646 aa10.42□□□□□ -0.74
AP001189.6-201ENST00000528781 POTEFA5A3E0 1075 aa10.41□□□□□ -0.74
AP001189.6-201ENST00000528781 PROM2Q8N271 834 aa10.41□□□□□ -0.74
AP001189.6-201ENST00000528781 SCUBE2Q9NQ36 999 aa10.41□□□□□ -0.74
AP001189.6-201ENST00000528781 FAM163AQ96GL9 167 aaPredicted RBP10.4□□□□□ -0.74
AP001189.6-201ENST00000528781 BMP2KQ9NSY1 1161 aaPredicted RBP10.38□□□□□ -0.75
AP001189.6-201ENST00000528781 TRPC6Q9Y210 931 aa10.36□□□□□ -0.75
AP001189.6-201ENST00000528781 TIE1P35590 1138 aa10.33□□□□□ -0.76
AP001189.6-201ENST00000528781 MAP3K13O43283 966 aa10.32□□□□□ -0.76
AP001189.6-201ENST00000528781 EHMT2Q96KQ7 1210 aa10.3□□□□□ -0.76
AP001189.6-201ENST00000528781 COLQQ9Y215 455 aaPredicted RBP10.29□□□□□ -0.76
AP001189.6-201ENST00000528781 RASEFQ8IZ41 740 aa10.27□□□□□ -0.77
AP001189.6-201ENST00000528781 TTLL13PA6NNM8 815 aa10.26□□□□□ -0.77
AP001189.6-201ENST00000528781 SEC24BO95487 1268 aa10.23□□□□□ -0.77
AP001189.6-201ENST00000528781 IER5LQ5T953 404 aa10.21□□□□□ -0.77
AP001189.6-201ENST00000528781 CDAN1Q8IWY9 1227 aa10.21□□□□□ -0.77
AP001189.6-201ENST00000528781 MIER1Q8N108 512 aa10.21□□□□□ -0.77
AP001189.6-201ENST00000528781 PLEKHG5O94827 1062 aa10.2□□□□□ -0.78
AP001189.6-201ENST00000528781 SGIP1Q9BQI5 828 aa10.2□□□□□ -0.78
AP001189.6-201ENST00000528781 TRIM35Q9UPQ4 493 aa10.18□□□□□ -0.78
AP001189.6-201ENST00000528781 PCDHB13Q9Y5F0 798 aa10.14□□□□□ -0.79
AP001189.6-201ENST00000528781 ST18O60284 1047 aa10.13□□□□□ -0.79
AP001189.6-201ENST00000528781 SLAIN1Q8ND83 568 aa10.11□□□□□ -0.79
AP001189.6-201ENST00000528781 NUBP1P53384 320 aa10.1□□□□□ -0.79
AP001189.6-201ENST00000528781 IFNL1Q8IU54 200 aa10.09□□□□□ -0.79
AP001189.6-201ENST00000528781 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
AP001189.6-201ENST00000528781 IRX5P78411 483 aaPredicted RBP10.05□□□□□ -0.8
AP001189.6-201ENST00000528781 TMEM106CQ9BVX2 250 aa10.05□□□□□ -0.8
AP001189.6-201ENST00000528781 PLCG2P16885 1265 aa10.04□□□□□ -0.8
AP001189.6-201ENST00000528781 ZBTB47Q9UFB7 747 aaPredicted RBP10.03□□□□□ -0.8
AP001189.6-201ENST00000528781 TMEM121BQ9BXQ6 578 aaPredicted RBP10□□□□□ -0.81
AP001189.6-201ENST00000528781 MMRN1Q13201 1228 aa9.99□□□□□ -0.81
AP001189.6-201ENST00000528781 SPNS2Q8IVW8 549 aa9.99□□□□□ -0.81
AP001189.6-201ENST00000528781 FAM212AQ96EL1 285 aa9.98□□□□□ -0.81
AP001189.6-201ENST00000528781 OCEL1Q9H607 264 aa9.97□□□□□ -0.81
AP001189.6-201ENST00000528781 SNPHO15079 494 aa9.93□□□□□ -0.82
AP001189.6-201ENST00000528781 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.91□□□□□ -0.82
AP001189.6-201ENST00000528781 MARVELD3Q96A59 401 aa9.9□□□□□ -0.82
AP001189.6-201ENST00000528781 PYGBP11216 843 aa9.87□□□□□ -0.83
AP001189.6-201ENST00000528781 PCDHB8Q9UN66 801 aa9.85□□□□□ -0.83
AP001189.6-201ENST00000528781 DCAF8Q5TAQ9 597 aa9.84□□□□□ -0.83
AP001189.6-201ENST00000528781 PDCD7Q8N8D1 485 aaKnown RBP9.84□□□□□ -0.83
AP001189.6-201ENST00000528781 POTEB3A0JP26 581 aa9.78□□□□□ -0.84
AP001189.6-201ENST00000528781 EMP3P54852 163 aa9.78□□□□□ -0.84
AP001189.6-201ENST00000528781 POTEBQ6S5H4 581 aa9.78□□□□□ -0.84
AP001189.6-201ENST00000528781 KRTAP3-3Q9BYR6 98 aa9.78□□□□□ -0.84
AP001189.6-201ENST00000528781 KRTAP3-2Q9BYR7 98 aa9.78□□□□□ -0.84
AP001189.6-201ENST00000528781 C3orf67Q6ZVT6 689 aa9.76□□□□□ -0.85
AP001189.6-201ENST00000528781 L3MBTL3Q96JM7 780 aaPredicted RBP9.76□□□□□ -0.85
AP001189.6-201ENST00000528781 HS3ST6Q96QI5 342 aa9.74□□□□□ -0.85
AP001189.6-201ENST00000528781 MKRN3Q13064 507 aaKnown RBP9.73□□□□□ -0.85
AP001189.6-201ENST00000528781 ZNF467Q7Z7K2 595 aaPredicted RBP9.72□□□□□ -0.85
AP001189.6-201ENST00000528781 FAM205CA6NFA0 338 aa9.71□□□□□ -0.86
AP001189.6-201ENST00000528781 ILDR1Q86SU0 546 aaPredicted RBP9.71□□□□□ -0.86
AP001189.6-201ENST00000528781 GOLGA2Q08379 1002 aa9.7□□□□□ -0.86
AP001189.6-201ENST00000528781 FKBP8Q14318 412 aa9.7□□□□□ -0.86
AP001189.6-201ENST00000528781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.7□□□□□ -0.86
AP001189.6-201ENST00000528781 CHRM1P11229 460 aaPredicted RBP9.69□□□□□ -0.86
AP001189.6-201ENST00000528781 GSE1Q14687 1217 aa9.67□□□□□ -0.86
AP001189.6-201ENST00000528781 PSEN1P49768 467 aa9.65□□□□□ -0.86
AP001189.6-201ENST00000528781 FBXO3Q9UK99 471 aa9.64□□□□□ -0.87
AP001189.6-201ENST00000528781 HOXB3P14651 431 aaPredicted RBP9.63□□□□□ -0.87
AP001189.6-201ENST00000528781 DPY19L2Q6NUT2 758 aa9.63□□□□□ -0.87
AP001189.6-201ENST00000528781 HOXB1P14653 301 aaPredicted RBP9.58□□□□□ -0.88
AP001189.6-201ENST00000528781 KLHL34Q8N239 644 aa9.58□□□□□ -0.88
AP001189.6-201ENST00000528781 BOLA1Q9Y3E2 137 aa9.58□□□□□ -0.88
AP001189.6-201ENST00000528781 PDAP1Q13442 181 aaKnown RBP9.57□□□□□ -0.88
AP001189.6-201ENST00000528781 VASPP50552 380 aaPredicted RBP9.55□□□□□ -0.88
AP001189.6-201ENST00000528781 ZNF710Q8N1W2 664 aa9.52□□□□□ -0.89
AP001189.6-201ENST00000528781 CABP2Q9NPB3 220 aa9.52□□□□□ -0.89
AP001189.6-201ENST00000528781 G3V3G9 751 aa9.51□□□□□ -0.89
AP001189.6-201ENST00000528781 DOK7Q18PE1 504 aa9.51□□□□□ -0.89
AP001189.6-201ENST00000528781 ERBB3P21860 1342 aa9.51□□□□□ -0.89
AP001189.6-201ENST00000528781 RNF166Q96A37 237 aaPredicted RBP9.49□□□□□ -0.89
AP001189.6-201ENST00000528781 VARS2Q5ST30 1063 aaKnown RBP9.46□□□□□ -0.9
AP001189.6-201ENST00000528781 MYT1LQ9UL68 1186 aa9.44□□□□□ -0.9
AP001189.6-201ENST00000528781 RIMBP2O15034 1052 aa9.43□□□□□ -0.9
AP001189.6-201ENST00000528781 ZNF687Q8N1G0 1237 aa9.42□□□□□ -0.9
AP001189.6-201ENST00000528781 ZSWIM6Q9HCJ5 1215 aa9.41□□□□□ -0.9
AP001189.6-201ENST00000528781 TMEM92Q6UXU6 159 aa9.4□□□□□ -0.9
AP001189.6-201ENST00000528781 GPR153Q6NV75 609 aa9.39□□□□□ -0.91
AP001189.6-201ENST00000528781 EFCAB3Q8N7B9 438 aa9.39□□□□□ -0.91
AP001189.6-201ENST00000528781 SPOCK2Q92563 424 aa9.39□□□□□ -0.91
AP001189.6-201ENST00000528781 CIZ1Q9ULV3 898 aaPredicted RBP9.39□□□□□ -0.91
AP001189.6-201ENST00000528781 IFNLR1Q8IU57 520 aaPredicted RBP9.37□□□□□ -0.91
AP001189.6-201ENST00000528781 MICALL2Q8IY33 904 aa9.36□□□□□ -0.91
AP001189.6-201ENST00000528781 PTGER2P43116 358 aa9.35□□□□□ -0.91
AP001189.6-201ENST00000528781 SOX12O15370 315 aa9.28□□□□□ -0.92
AP001189.6-201ENST00000528781 ARSIQ5FYB1 569 aa9.28□□□□□ -0.92
AP001189.6-201ENST00000528781 MS4A4AQ96JQ5 239 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms