RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 CCDC61Q9Y6R9 512 aa23.06■■□□□ 1.28
CTNND1-217ENST00000527599 SPOCK2Q92563 424 aa23■■□□□ 1.27
CTNND1-217ENST00000527599 FAM212AQ96EL1 285 aa22.95■■□□□ 1.26
CTNND1-217ENST00000527599 DCAF8Q5TAQ9 597 aa22.91■■□□□ 1.26
CTNND1-217ENST00000527599 GALR2O43603 387 aaPredicted RBP22.86■■□□□ 1.25
CTNND1-217ENST00000527599 KIF12Q96FN5 646 aa22.86■■□□□ 1.25
CTNND1-217ENST00000527599 CLCN6P51797 869 aa22.85■■□□□ 1.25
CTNND1-217ENST00000527599 MAP3K13O43283 966 aa22.77■■□□□ 1.24
CTNND1-217ENST00000527599 GSE1Q14687 1217 aa22.77■■□□□ 1.24
CTNND1-217ENST00000527599 MS4A3Q96HJ5 214 aa22.77■■□□□ 1.24
CTNND1-217ENST00000527599 PYGBP11216 843 aa22.72■■□□□ 1.23
CTNND1-217ENST00000527599 CIZ1Q9ULV3 898 aaPredicted RBP22.71■■□□□ 1.23
CTNND1-217ENST00000527599 POTEIP0CG38 1075 aa22.67■■□□□ 1.22
CTNND1-217ENST00000527599 PCDHB13Q9Y5F0 798 aa22.61■■□□□ 1.21
CTNND1-217ENST00000527599 TRPC6Q9Y210 931 aa22.6■■□□□ 1.21
CTNND1-217ENST00000527599 SGIP1Q9BQI5 828 aa22.58■■□□□ 1.21
CTNND1-217ENST00000527599 CHRM1P11229 460 aaPredicted RBP22.57■■□□□ 1.2
CTNND1-217ENST00000527599 IFNL1Q8IU54 200 aa22.57■■□□□ 1.2
CTNND1-217ENST00000527599 DCBLD2Q96PD2 775 aa22.54■■□□□ 1.2
CTNND1-217ENST00000527599 PCDHB8Q9UN66 801 aa22.47■■□□□ 1.19
CTNND1-217ENST00000527599 ASTLQ6HA08 431 aaPredicted RBP22.41■■□□□ 1.18
CTNND1-217ENST00000527599 BMP2KQ9NSY1 1161 aaPredicted RBP22.41■■□□□ 1.18
CTNND1-217ENST00000527599 ATMINO43313 823 aaPredicted RBP22.4■■□□□ 1.18
CTNND1-217ENST00000527599 PKD2Q13563 968 aa22.39■■□□□ 1.17
CTNND1-217ENST00000527599 PELP1Q8IZL8 1130 aaKnown RBP22.39■■□□□ 1.17
CTNND1-217ENST00000527599 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
CTNND1-217ENST00000527599 TIE1P35590 1138 aa22.36■■□□□ 1.17
CTNND1-217ENST00000527599 ATN1P54259 1190 aaPredicted RBP22.33■■□□□ 1.17
CTNND1-217ENST00000527599 TTLL13PA6NNM8 815 aa22.32■■□□□ 1.16
CTNND1-217ENST00000527599 ZNF467Q7Z7K2 595 aaPredicted RBP22.32■■□□□ 1.16
CTNND1-217ENST00000527599 RNF25Q96BH1 459 aaPredicted RBP22.29■■□□□ 1.16
CTNND1-217ENST00000527599 TMEM106CQ9BVX2 250 aa22.25■■□□□ 1.15
CTNND1-217ENST00000527599 ECM2O94769 699 aaPredicted RBP22.22■■□□□ 1.15
CTNND1-217ENST00000527599 PSEN1P49768 467 aa22.16■■□□□ 1.14
CTNND1-217ENST00000527599 TRIM35Q9UPQ4 493 aa22.15■■□□□ 1.14
CTNND1-217ENST00000527599 RIOK3O14730 519 aaKnown RBP22.13■■□□□ 1.13
CTNND1-217ENST00000527599 PDAP1Q13442 181 aaKnown RBP22.13■■□□□ 1.13
CTNND1-217ENST00000527599 RGL2O15211 777 aa22.1■■□□□ 1.13
CTNND1-217ENST00000527599 SLC39A7Q92504 469 aa22.08■■□□□ 1.13
CTNND1-217ENST00000527599 METRNQ9UJH8 293 aa22.07■■□□□ 1.12
CTNND1-217ENST00000527599 C7P10643 843 aa22.05■■□□□ 1.12
CTNND1-217ENST00000527599 POTEFA5A3E0 1075 aa22.01■■□□□ 1.11
CTNND1-217ENST00000527599 VGFO15240 615 aaPredicted RBP21.97■■□□□ 1.11
CTNND1-217ENST00000527599 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.96■■□□□ 1.11
CTNND1-217ENST00000527599 POTEB2H3BUK9 544 aa21.96■■□□□ 1.11
CTNND1-217ENST00000527599 ZFP91Q96JP5 570 aaPredicted RBP21.96■■□□□ 1.11
CTNND1-217ENST00000527599 IER5LQ5T953 404 aa21.94■■□□□ 1.1
CTNND1-217ENST00000527599 COLQQ9Y215 455 aaPredicted RBP21.94■■□□□ 1.1
CTNND1-217ENST00000527599 LHX8Q68G74 356 aa21.93■■□□□ 1.1
CTNND1-217ENST00000527599 CABP2Q9NPB3 220 aa21.89■■□□□ 1.09
CTNND1-217ENST00000527599 IRX5P78411 483 aaPredicted RBP21.86■■□□□ 1.09
CTNND1-217ENST00000527599 POTEJP0CG39 1038 aa21.82■■□□□ 1.08
CTNND1-217ENST00000527599 SEC24BO95487 1268 aa21.81■■□□□ 1.08
CTNND1-217ENST00000527599 GOLGA2Q08379 1002 aa21.81■■□□□ 1.08
CTNND1-217ENST00000527599 MKRN3Q13064 507 aaKnown RBP21.79■■□□□ 1.08
CTNND1-217ENST00000527599 BCL11BQ9C0K0 894 aaPredicted RBP21.78■■□□□ 1.08
CTNND1-217ENST00000527599 RTN4Q9NQC3 1192 aaKnown RBP21.78■■□□□ 1.08
CTNND1-217ENST00000527599 TAOK2Q9UL54 1235 aa21.78■■□□□ 1.08
CTNND1-217ENST00000527599 EFCAB3Q8N7B9 438 aa21.77■■□□□ 1.08
CTNND1-217ENST00000527599 STK25O00506 426 aa21.73■■□□□ 1.07
CTNND1-217ENST00000527599 OCEL1Q9H607 264 aa21.73■■□□□ 1.07
CTNND1-217ENST00000527599 PLCG2P16885 1265 aa21.72■■□□□ 1.07
CTNND1-217ENST00000527599 AMER1Q5JTC6 1135 aaPredicted RBP21.72■■□□□ 1.07
CTNND1-217ENST00000527599 ILDR1Q86SU0 546 aaPredicted RBP21.71■■□□□ 1.07
CTNND1-217ENST00000527599 PDCD7Q8N8D1 485 aaKnown RBP21.71■■□□□ 1.07
CTNND1-217ENST00000527599 STK24Q9Y6E0 443 aa21.71■■□□□ 1.07
CTNND1-217ENST00000527599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.68■■□□□ 1.061e-9■□□□□ 8.7
CTNND1-217ENST00000527599 OTUD5Q96G74 571 aa21.63■■□□□ 1.05
CTNND1-217ENST00000527599 DPY19L2Q6NUT2 758 aa21.59■■□□□ 1.05
CTNND1-217ENST00000527599 HS6ST3Q8IZP7 471 aa21.57■■□□□ 1.04
CTNND1-217ENST00000527599 SOX12O15370 315 aa21.56■■□□□ 1.04
CTNND1-217ENST00000527599 CHGAP10645 457 aaKnown RBP21.55■■□□□ 1.04
CTNND1-217ENST00000527599 PHF8Q9UPP1 1060 aa21.55■■□□□ 1.04
CTNND1-217ENST00000527599 MS4A4AQ96JQ5 239 aa21.51■■□□□ 1.03
CTNND1-217ENST00000527599 MFRPQ9BY79 579 aa21.49■■□□□ 1.03
CTNND1-217ENST00000527599 FBXO22Q8NEZ5 403 aa21.47■■□□□ 1.03
CTNND1-217ENST00000527599 DCAF8L2P0C7V8 631 aa21.45■■□□□ 1.02
CTNND1-217ENST00000527599 MAMSTRQ6ZN01 415 aa21.44■■□□□ 1.02
CTNND1-217ENST00000527599 NLRP6P59044 892 aa21.4■■□□□ 1.02
CTNND1-217ENST00000527599 SCUBE2Q9NQ36 999 aa21.39■■□□□ 1.01
CTNND1-217ENST00000527599 L3MBTL3Q96JM7 780 aaPredicted RBP21.38■■□□□ 1.01
CTNND1-217ENST00000527599 NKX1-1Q15270 411 aaPredicted RBP21.37■■□□□ 1.01
CTNND1-217ENST00000527599 DNAJC5Q9H3Z4 198 aa21.37■■□□□ 1.01
CTNND1-217ENST00000527599 BOLA1Q9Y3E2 137 aa21.33■■□□□ 1.01
CTNND1-217ENST00000527599 TMEM121BQ9BXQ6 578 aaPredicted RBP21.28■■□□□ 1
CTNND1-217ENST00000527599 MICALL2Q8IY33 904 aa21.23■□□□□ 0.99
CTNND1-217ENST00000527599 PPP1R37O75864 691 aa21.21■□□□□ 0.99
CTNND1-217ENST00000527599 SLAIN1Q8ND83 568 aa21.21■□□□□ 0.99
CTNND1-217ENST00000527599 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.21■□□□□ 0.99
CTNND1-217ENST00000527599 C3orf67Q6ZVT6 689 aa21.19■□□□□ 0.98
CTNND1-217ENST00000527599 G3V3G9 751 aa21.17■□□□□ 0.98
CTNND1-217ENST00000527599 GTPBP6O43824 516 aaPredicted RBP21.09■□□□□ 0.97
CTNND1-217ENST00000527599 TMEM92Q6UXU6 159 aa21.08■□□□□ 0.97
CTNND1-217ENST00000527599 BBXQ8WY36 941 aaPredicted RBP21.02■□□□□ 0.96
CTNND1-217ENST00000527599 RYDENQ9NUL5 291 aaKnown RBP20.96■□□□□ 0.95
CTNND1-217ENST00000527599 LCE2DQ5TA82 110 aaPredicted RBP20.93■□□□□ 0.94
CTNND1-217ENST00000527599 FAM163AQ96GL9 167 aaPredicted RBP20.88■□□□□ 0.93
CTNND1-217ENST00000527599 KIF3CO14782 793 aa20.85■□□□□ 0.93
CTNND1-217ENST00000527599 C2orf72A6NCS6 295 aa20.81■□□□□ 0.92
CTNND1-217ENST00000527599 HOXB3P14651 431 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms