RNA–Protein interactions for RNA: ENST00000527337.1

RCN1-203, Transcript of reticulocalbin 1, humanhuman

TSL 3

Gene RCN1, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-203ENST00000527337 TSPYL2Q9H2G4 693 aaPredicted RBP8.91□□□□□ -0.98
RCN1-203ENST00000527337 MS4A3Q96HJ5 214 aa8.89□□□□□ -0.99
RCN1-203ENST00000527337 CCDC61Q9Y6R9 512 aa8.87□□□□□ -0.99
RCN1-203ENST00000527337 PELP1Q8IZL8 1130 aaKnown RBP8.85□□□□□ -0.99
RCN1-203ENST00000527337 ASTLQ6HA08 431 aaPredicted RBP8.84□□□□□ -0.99
RCN1-203ENST00000527337 POTEB2H3BUK9 544 aa8.83□□□□□ -1
RCN1-203ENST00000527337 PLCD3Q8N3E9 789 aa8.83□□□□□ -1
RCN1-203ENST00000527337 ATMINO43313 823 aaPredicted RBP8.82□□□□□ -1
RCN1-203ENST00000527337 RASEFQ8IZ41 740 aa8.82□□□□□ -1
RCN1-203ENST00000527337 KIF12Q96FN5 646 aa8.82□□□□□ -1
RCN1-203ENST00000527337 OTUD5Q96G74 571 aa8.8□□□□□ -1
RCN1-203ENST00000527337 SLC39A7Q92504 469 aa8.78□□□□□ -1
RCN1-203ENST00000527337 METRNQ9UJH8 293 aa8.78□□□□□ -1
RCN1-203ENST00000527337 MAP3K13O43283 966 aa8.77□□□□□ -1.01
RCN1-203ENST00000527337 C7P10643 843 aa8.77□□□□□ -1.01
RCN1-203ENST00000527337 VASPP50552 380 aaPredicted RBP8.77□□□□□ -1.01
RCN1-203ENST00000527337 ZBTB47Q9UFB7 747 aaPredicted RBP8.77□□□□□ -1.01
RCN1-203ENST00000527337 ATN1P54259 1190 aaPredicted RBP8.75□□□□□ -1.01
RCN1-203ENST00000527337 TRPC6Q9Y210 931 aa8.74□□□□□ -1.01
RCN1-203ENST00000527337 NUBP1P53384 320 aa8.73□□□□□ -1.01
RCN1-203ENST00000527337 BMP2KQ9NSY1 1161 aaPredicted RBP8.73□□□□□ -1.01
RCN1-203ENST00000527337 TIE1P35590 1138 aa8.71□□□□□ -1.02
RCN1-203ENST00000527337 POTEJP0CG39 1038 aa8.69□□□□□ -1.02
RCN1-203ENST00000527337 SGIP1Q9BQI5 828 aa8.69□□□□□ -1.02
RCN1-203ENST00000527337 DCAF8L2P0C7V8 631 aa8.68□□□□□ -1.02
RCN1-203ENST00000527337 PCDHB13Q9Y5F0 798 aa8.68□□□□□ -1.02
RCN1-203ENST00000527337 FAM212AQ96EL1 285 aa8.67□□□□□ -1.02
RCN1-203ENST00000527337 TTLL13PA6NNM8 815 aa8.66□□□□□ -1.02
RCN1-203ENST00000527337 MAMSTRQ6ZN01 415 aa8.66□□□□□ -1.02
RCN1-203ENST00000527337 POTEFA5A3E0 1075 aa8.64□□□□□ -1.03
RCN1-203ENST00000527337 PLCB2Q00722 1185 aa8.64□□□□□ -1.03
RCN1-203ENST00000527337 SCUBE2Q9NQ36 999 aa8.63□□□□□ -1.03
RCN1-203ENST00000527337 IFNL1Q8IU54 200 aa8.62□□□□□ -1.03
RCN1-203ENST00000527337 IFNLR1Q8IU57 520 aaPredicted RBP8.62□□□□□ -1.03
RCN1-203ENST00000527337 TRIM35Q9UPQ4 493 aa8.61□□□□□ -1.03
RCN1-203ENST00000527337 SEC24BO95487 1268 aa8.6□□□□□ -1.03
RCN1-203ENST00000527337 DCAF8Q5TAQ9 597 aa8.59□□□□□ -1.03
RCN1-203ENST00000527337 KLHL34Q8N239 644 aa8.59□□□□□ -1.03
RCN1-203ENST00000527337 COLQQ9Y215 455 aaPredicted RBP8.59□□□□□ -1.03
RCN1-203ENST00000527337 POTEMA6NI47 508 aa8.58□□□□□ -1.04
RCN1-203ENST00000527337 IER5LQ5T953 404 aa8.58□□□□□ -1.04
RCN1-203ENST00000527337 TMEM106CQ9BVX2 250 aa8.57□□□□□ -1.04
RCN1-203ENST00000527337 PYGBP11216 843 aa8.56□□□□□ -1.04
RCN1-203ENST00000527337 HAP1P54257 671 aaPredicted RBP8.56□□□□□ -1.04
RCN1-203ENST00000527337 POTEGQ6S5H5 508 aa8.55□□□□□ -1.04
RCN1-203ENST00000527337 SPOCK2Q92563 424 aa8.55□□□□□ -1.04
RCN1-203ENST00000527337 PLSCR2Q9NRY7 297 aa8.54□□□□□ -1.04
RCN1-203ENST00000527337 PKD2Q13563 968 aa8.51□□□□□ -1.05
RCN1-203ENST00000527337 FAM163AQ96GL9 167 aaPredicted RBP8.51□□□□□ -1.05
RCN1-203ENST00000527337 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.51□□□□□ -1.05
RCN1-203ENST00000527337 PLCG2P16885 1265 aa8.49□□□□□ -1.05
RCN1-203ENST00000527337 GSE1Q14687 1217 aa8.49□□□□□ -1.05
RCN1-203ENST00000527337 LCE2DQ5TA82 110 aaPredicted RBP8.49□□□□□ -1.05
RCN1-203ENST00000527337 PCDHB8Q9UN66 801 aa8.49□□□□□ -1.05
RCN1-203ENST00000527337 ECM2O94769 699 aaPredicted RBP8.48□□□□□ -1.05
RCN1-203ENST00000527337 IRX5P78411 483 aaPredicted RBP8.48□□□□□ -1.05
RCN1-203ENST00000527337 VSIG10Q8N0Z9 540 aa8.45□□□□□ -1.06
RCN1-203ENST00000527337 PCDH10Q9P2E7 1040 aa8.45□□□□□ -1.06
RCN1-203ENST00000527337 ZNF467Q7Z7K2 595 aaPredicted RBP8.44□□□□□ -1.06
RCN1-203ENST00000527337 BBXQ8WY36 941 aaPredicted RBP8.44□□□□□ -1.06
RCN1-203ENST00000527337 BCANQ96GW7 911 aa8.44□□□□□ -1.06
RCN1-203ENST00000527337 OCEL1Q9H607 264 aa8.44□□□□□ -1.06
RCN1-203ENST00000527337 CHRM1P11229 460 aaPredicted RBP8.42□□□□□ -1.06
RCN1-203ENST00000527337 SLAIN1Q8ND83 568 aa8.42□□□□□ -1.06
RCN1-203ENST00000527337 GOLGA2Q08379 1002 aa8.37□□□□□ -1.07
RCN1-203ENST00000527337 PSEN1P49768 467 aa8.36□□□□□ -1.07
RCN1-203ENST00000527337 MKRN3Q13064 507 aaKnown RBP8.36□□□□□ -1.07
RCN1-203ENST00000527337 PAXIP1Q6ZW49 1069 aaPredicted RBP8.35□□□□□ -1.07
RCN1-203ENST00000527337 CFAP44Q96MT7 982 aa8.35□□□□□ -1.07
RCN1-203ENST00000527337 CIZ1Q9ULV3 898 aaPredicted RBP8.35□□□□□ -1.07
RCN1-203ENST00000527337 PDCD7Q8N8D1 485 aaKnown RBP8.34□□□□□ -1.07
RCN1-203ENST00000527337 TRIM41Q8WV44 630 aa8.34□□□□□ -1.07
RCN1-203ENST00000527337 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.34□□□□□ -1.07
RCN1-203ENST00000527337 ST18O60284 1047 aa8.33□□□□□ -1.08
RCN1-203ENST00000527337 PDAP1Q13442 181 aaKnown RBP8.32□□□□□ -1.08
RCN1-203ENST00000527337 SPRYD3Q8NCJ5 442 aa8.32□□□□□ -1.08
RCN1-203ENST00000527337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.31□□□□□ -1.08
RCN1-203ENST00000527337 RGL2O15211 777 aa8.29□□□□□ -1.08
RCN1-203ENST00000527337 CDAN1Q8IWY9 1227 aa8.29□□□□□ -1.08
RCN1-203ENST00000527337 L3MBTL3Q96JM7 780 aaPredicted RBP8.29□□□□□ -1.08
RCN1-203ENST00000527337 SNPHO15079 494 aa8.28□□□□□ -1.08
RCN1-203ENST00000527337 C3orf67Q6ZVT6 689 aa8.28□□□□□ -1.08
RCN1-203ENST00000527337 TAOK2Q9UL54 1235 aa8.27□□□□□ -1.09
RCN1-203ENST00000527337 ILDR1Q86SU0 546 aaPredicted RBP8.26□□□□□ -1.09
RCN1-203ENST00000527337 TMEM121BQ9BXQ6 578 aaPredicted RBP8.26□□□□□ -1.09
RCN1-203ENST00000527337 CABP2Q9NPB3 220 aa8.26□□□□□ -1.09
RCN1-203ENST00000527337 CHGAP10645 457 aaKnown RBP8.25□□□□□ -1.09
RCN1-203ENST00000527337 DPY19L2Q6NUT2 758 aa8.22□□□□□ -1.09
RCN1-203ENST00000527337 MARVELD3Q96A59 401 aa8.19□□□□□ -1.1
RCN1-203ENST00000527337 BOLA1Q9Y3E2 137 aa8.19□□□□□ -1.1
RCN1-203ENST00000527337 G3V3G9 751 aa8.18□□□□□ -1.1
RCN1-203ENST00000527337 KDM2AQ9Y2K7 1162 aa8.18□□□□□ -1.1
RCN1-203ENST00000527337 HS6ST3Q8IZP7 471 aa8.16□□□□□ -1.1
RCN1-203ENST00000527337 EFCAB3Q8N7B9 438 aa8.15□□□□□ -1.1
RCN1-203ENST00000527337 TSHZ2Q9NRE2 1034 aa8.15□□□□□ -1.1
RCN1-203ENST00000527337 RIOK3O14730 519 aaKnown RBP8.13□□□□□ -1.11
RCN1-203ENST00000527337 EMP3P54852 163 aa8.13□□□□□ -1.11
RCN1-203ENST00000527337 NBR1Q14596 966 aa8.12□□□□□ -1.11
RCN1-203ENST00000527337 RNF25Q96BH1 459 aaPredicted RBP8.12□□□□□ -1.11
RCN1-203ENST00000527337 PRKCSHP14314 528 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms