RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 GSE1Q14687 1217 aa10.94□□□□□ -0.66
CTR9-203ENST00000526874 HAX1O00165 279 aa10.91□□□□□ -0.66
CTR9-203ENST00000526874 PYGBP11216 843 aa10.91□□□□□ -0.66
CTR9-203ENST00000526874 ZRANB1Q9UGI0 708 aa10.91□□□□□ -0.66
CTR9-203ENST00000526874 C19orf67A6NJJ6 358 aa10.89□□□□□ -0.67
CTR9-203ENST00000526874 PAK3O75914 559 aaPredicted RBP10.89□□□□□ -0.67
CTR9-203ENST00000526874 EVX2Q03828 476 aa10.88□□□□□ -0.67
CTR9-203ENST00000526874 CCDC61Q9Y6R9 512 aa10.87□□□□□ -0.67
CTR9-203ENST00000526874 RGL2O15211 777 aa10.86□□□□□ -0.67
CTR9-203ENST00000526874 DCAF8L2P0C7V8 631 aa10.86□□□□□ -0.67
CTR9-203ENST00000526874 PHF12Q96QT6 1004 aa10.86□□□□□ -0.67
CTR9-203ENST00000526874 RNF25Q96BH1 459 aaPredicted RBP10.82□□□□□ -0.68
CTR9-203ENST00000526874 TRIM41Q8WV44 630 aa10.79□□□□□ -0.68
CTR9-203ENST00000526874 MAP3K13O43283 966 aa10.77□□□□□ -0.69
CTR9-203ENST00000526874 ZNF579Q8NAF0 562 aaKnown RBP10.76□□□□□ -0.69
CTR9-203ENST00000526874 KIF12Q96FN5 646 aa10.75□□□□□ -0.69
CTR9-203ENST00000526874 PCDHB8Q9UN66 801 aa10.75□□□□□ -0.69
CTR9-203ENST00000526874 PCDHB13Q9Y5F0 798 aa10.75□□□□□ -0.69
CTR9-203ENST00000526874 CHRM1P11229 460 aaPredicted RBP10.74□□□□□ -0.69
CTR9-203ENST00000526874 RIOK3O14730 519 aaKnown RBP10.71□□□□□ -0.69
CTR9-203ENST00000526874 IFNL1Q8IU54 200 aa10.71□□□□□ -0.69
CTR9-203ENST00000526874 MS4A3Q96HJ5 214 aa10.71□□□□□ -0.69
CTR9-203ENST00000526874 TRPC6Q9Y210 931 aa10.68□□□□□ -0.7
CTR9-203ENST00000526874 GALR2O43603 387 aaPredicted RBP10.67□□□□□ -0.7
CTR9-203ENST00000526874 ZNF467Q7Z7K2 595 aaPredicted RBP10.66□□□□□ -0.7
CTR9-203ENST00000526874 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.64□□□□□ -0.71
CTR9-203ENST00000526874 CHGAP10645 457 aaKnown RBP10.64□□□□□ -0.71
CTR9-203ENST00000526874 ZFP91Q96JP5 570 aaPredicted RBP10.64□□□□□ -0.71
CTR9-203ENST00000526874 VGFO15240 615 aaPredicted RBP10.63□□□□□ -0.71
CTR9-203ENST00000526874 SGIP1Q9BQI5 828 aa10.61□□□□□ -0.71
CTR9-203ENST00000526874 STK25O00506 426 aa10.6□□□□□ -0.71
CTR9-203ENST00000526874 GABBR2O75899 941 aa10.6□□□□□ -0.71
CTR9-203ENST00000526874 PSEN1P49768 467 aa10.6□□□□□ -0.71
CTR9-203ENST00000526874 PDAP1Q13442 181 aaKnown RBP10.59□□□□□ -0.71
CTR9-203ENST00000526874 BCL11BQ9C0K0 894 aaPredicted RBP10.58□□□□□ -0.72
CTR9-203ENST00000526874 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
CTR9-203ENST00000526874 SP7Q8TDD2 431 aaPredicted RBP10.57□□□□□ -0.72
CTR9-203ENST00000526874 HS6ST3Q8IZP7 471 aa10.55□□□□□ -0.72
CTR9-203ENST00000526874 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
CTR9-203ENST00000526874 TMEM106CQ9BVX2 250 aa10.54□□□□□ -0.72
CTR9-203ENST00000526874 BMP2KQ9NSY1 1161 aaPredicted RBP10.52□□□□□ -0.73
CTR9-203ENST00000526874 CABP2Q9NPB3 220 aa10.51□□□□□ -0.73
CTR9-203ENST00000526874 TTLL13PA6NNM8 815 aa10.5□□□□□ -0.73
CTR9-203ENST00000526874 TIE1P35590 1138 aa10.48□□□□□ -0.73
CTR9-203ENST00000526874 CLCN6P51797 869 aa10.47□□□□□ -0.73
CTR9-203ENST00000526874 NKX1-1Q15270 411 aaPredicted RBP10.47□□□□□ -0.73
CTR9-203ENST00000526874 ATN1P54259 1190 aaPredicted RBP10.46□□□□□ -0.73
CTR9-203ENST00000526874 BBXQ8WY36 941 aaPredicted RBP10.46□□□□□ -0.73
CTR9-203ENST00000526874 EFCAB3Q8N7B9 438 aa10.45□□□□□ -0.74
CTR9-203ENST00000526874 ATMINO43313 823 aaPredicted RBP10.44□□□□□ -0.74
CTR9-203ENST00000526874 DCBLD2Q96PD2 775 aa10.44□□□□□ -0.74
CTR9-203ENST00000526874 TRIM35Q9UPQ4 493 aa10.44□□□□□ -0.74
CTR9-203ENST00000526874 POTEIP0CG38 1075 aa10.42□□□□□ -0.74
CTR9-203ENST00000526874 GOLGA2Q08379 1002 aa10.42□□□□□ -0.74
CTR9-203ENST00000526874 CFAP44Q96MT7 982 aa10.42□□□□□ -0.74
CTR9-203ENST00000526874 PAXIP1Q6ZW49 1069 aaPredicted RBP10.41□□□□□ -0.74
CTR9-203ENST00000526874 PELP1Q8IZL8 1130 aaKnown RBP10.41□□□□□ -0.74
CTR9-203ENST00000526874 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.41□□□□□ -0.74
CTR9-203ENST00000526874 ASTLQ6HA08 431 aaPredicted RBP10.4□□□□□ -0.74
CTR9-203ENST00000526874 PHF8Q9UPP1 1060 aa10.38□□□□□ -0.75
CTR9-203ENST00000526874 MKRN3Q13064 507 aaKnown RBP10.37□□□□□ -0.75
CTR9-203ENST00000526874 MFRPQ9BY79 579 aa10.37□□□□□ -0.75
CTR9-203ENST00000526874 DNAJC5Q9H3Z4 198 aa10.37□□□□□ -0.75
CTR9-203ENST00000526874 PLCB2Q00722 1185 aa10.35□□□□□ -0.75
CTR9-203ENST00000526874 GTPBP6O43824 516 aaPredicted RBP10.34□□□□□ -0.75
CTR9-203ENST00000526874 SPRYD3Q8NCJ5 442 aa10.33□□□□□ -0.76
CTR9-203ENST00000526874 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.31□□□□□ -0.76
CTR9-203ENST00000526874 SOX12O15370 315 aa10.3□□□□□ -0.76
CTR9-203ENST00000526874 FBXO22Q8NEZ5 403 aa10.3□□□□□ -0.76
CTR9-203ENST00000526874 MS4A4AQ96JQ5 239 aa10.3□□□□□ -0.76
CTR9-203ENST00000526874 PPP1R37O75864 691 aa10.28□□□□□ -0.76
CTR9-203ENST00000526874 HAP1P54257 671 aaPredicted RBP10.28□□□□□ -0.76
CTR9-203ENST00000526874 NLRP6P59044 892 aa10.28□□□□□ -0.76
CTR9-203ENST00000526874 DPY19L2Q6NUT2 758 aa10.27□□□□□ -0.77
CTR9-203ENST00000526874 COLQQ9Y215 455 aaPredicted RBP10.27□□□□□ -0.77
CTR9-203ENST00000526874 IRX5P78411 483 aaPredicted RBP10.26□□□□□ -0.77
CTR9-203ENST00000526874 METRNQ9UJH8 293 aa10.26□□□□□ -0.77
CTR9-203ENST00000526874 POTEFA5A3E0 1075 aa10.25□□□□□ -0.77
CTR9-203ENST00000526874 SLC39A7Q92504 469 aa10.25□□□□□ -0.77
CTR9-203ENST00000526874 SEC24BO95487 1268 aa10.24□□□□□ -0.77
CTR9-203ENST00000526874 PDCD7Q8N8D1 485 aaKnown RBP10.24□□□□□ -0.77
CTR9-203ENST00000526874 PLCG2P16885 1265 aa10.23□□□□□ -0.77
CTR9-203ENST00000526874 IER5LQ5T953 404 aa10.23□□□□□ -0.77
CTR9-203ENST00000526874 TSHZ2Q9NRE2 1034 aa10.22□□□□□ -0.77
CTR9-203ENST00000526874 OCEL1Q9H607 264 aa10.21□□□□□ -0.77
CTR9-203ENST00000526874 C7P10643 843 aa10.2□□□□□ -0.78
CTR9-203ENST00000526874 ILDR1Q86SU0 546 aaPredicted RBP10.2□□□□□ -0.78
CTR9-203ENST00000526874 RYDENQ9NUL5 291 aaKnown RBP10.2□□□□□ -0.78
CTR9-203ENST00000526874 CADPS2Q86UW7 1296 aa10.15□□□□□ -0.78
CTR9-203ENST00000526874 MICALL2Q8IY33 904 aa10.12□□□□□ -0.79
CTR9-203ENST00000526874 POTEB2H3BUK9 544 aa10.11□□□□□ -0.79
CTR9-203ENST00000526874 BOLA1Q9Y3E2 137 aa10.11□□□□□ -0.79
CTR9-203ENST00000526874 G3V3G9 751 aa10.09□□□□□ -0.79
CTR9-203ENST00000526874 POTEJP0CG39 1038 aa10.07□□□□□ -0.8
CTR9-203ENST00000526874 L3MBTL3Q96JM7 780 aaPredicted RBP10.06□□□□□ -0.8
CTR9-203ENST00000526874 KDM2AQ9Y2K7 1162 aa10.06□□□□□ -0.8
CTR9-203ENST00000526874 TMEM121BQ9BXQ6 578 aaPredicted RBP10.03□□□□□ -0.8
CTR9-203ENST00000526874 NCKAP5LQ9HCH0 1330 aa10.02□□□□□ -0.81
CTR9-203ENST00000526874 TMEM92Q6UXU6 159 aa10.01□□□□□ -0.81
CTR9-203ENST00000526874 C3orf67Q6ZVT6 689 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms