RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 NUBP1P53384 320 aa12.76□□□□□ -0.37
ATPAF1-208ENST00000526821 DCAF8Q5TAQ9 597 aa12.72□□□□□ -0.37
ATPAF1-208ENST00000526821 IFNLR1Q8IU57 520 aaPredicted RBP12.72□□□□□ -0.37
ATPAF1-208ENST00000526821 SPOCK2Q92563 424 aa12.72□□□□□ -0.37
ATPAF1-208ENST00000526821 PHF12Q96QT6 1004 aa12.72□□□□□ -0.37
ATPAF1-208ENST00000526821 CCDC61Q9Y6R9 512 aa12.7□□□□□ -0.38
ATPAF1-208ENST00000526821 GSE1Q14687 1217 aa12.69□□□□□ -0.38
ATPAF1-208ENST00000526821 DCBLD2Q96PD2 775 aa12.64□□□□□ -0.39
ATPAF1-208ENST00000526821 GALR2O43603 387 aaPredicted RBP12.6□□□□□ -0.39
ATPAF1-208ENST00000526821 KIF12Q96FN5 646 aa12.6□□□□□ -0.39
ATPAF1-208ENST00000526821 CIZ1Q9ULV3 898 aaPredicted RBP12.59□□□□□ -0.39
ATPAF1-208ENST00000526821 MS4A3Q96HJ5 214 aa12.58□□□□□ -0.4
ATPAF1-208ENST00000526821 SGIP1Q9BQI5 828 aa12.58□□□□□ -0.4
ATPAF1-208ENST00000526821 MAP3K13O43283 966 aa12.55□□□□□ -0.4
ATPAF1-208ENST00000526821 PCDHB13Q9Y5F0 798 aa12.55□□□□□ -0.4
ATPAF1-208ENST00000526821 PYGBP11216 843 aa12.53□□□□□ -0.4
ATPAF1-208ENST00000526821 TRIM41Q8WV44 630 aa12.51□□□□□ -0.41
ATPAF1-208ENST00000526821 CHRM1P11229 460 aaPredicted RBP12.46□□□□□ -0.41
ATPAF1-208ENST00000526821 ZNF467Q7Z7K2 595 aaPredicted RBP12.45□□□□□ -0.42
ATPAF1-208ENST00000526821 TIE1P35590 1138 aa12.44□□□□□ -0.42
ATPAF1-208ENST00000526821 IFNL1Q8IU54 200 aa12.43□□□□□ -0.42
ATPAF1-208ENST00000526821 POTEIP0CG38 1075 aa12.41□□□□□ -0.42
ATPAF1-208ENST00000526821 ASTLQ6HA08 431 aaPredicted RBP12.4□□□□□ -0.42
ATPAF1-208ENST00000526821 ATMINO43313 823 aaPredicted RBP12.38□□□□□ -0.43
ATPAF1-208ENST00000526821 BMP2KQ9NSY1 1161 aaPredicted RBP12.36□□□□□ -0.43
ATPAF1-208ENST00000526821 PCDHB8Q9UN66 801 aa12.36□□□□□ -0.43
ATPAF1-208ENST00000526821 SLC39A7Q92504 469 aa12.34□□□□□ -0.43
ATPAF1-208ENST00000526821 TMEM106CQ9BVX2 250 aa12.34□□□□□ -0.43
ATPAF1-208ENST00000526821 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
ATPAF1-208ENST00000526821 TTLL13PA6NNM8 815 aa12.33□□□□□ -0.44
ATPAF1-208ENST00000526821 ATN1P54259 1190 aaPredicted RBP12.32□□□□□ -0.44
ATPAF1-208ENST00000526821 C7P10643 843 aa12.31□□□□□ -0.44
ATPAF1-208ENST00000526821 PDAP1Q13442 181 aaKnown RBP12.28□□□□□ -0.44
ATPAF1-208ENST00000526821 TAOK2Q9UL54 1235 aa12.28□□□□□ -0.44
ATPAF1-208ENST00000526821 ECM2O94769 699 aaPredicted RBP12.27□□□□□ -0.45
ATPAF1-208ENST00000526821 GOLGA2Q08379 1002 aa12.27□□□□□ -0.45
ATPAF1-208ENST00000526821 METRNQ9UJH8 293 aa12.27□□□□□ -0.45
ATPAF1-208ENST00000526821 TRIM35Q9UPQ4 493 aa12.27□□□□□ -0.45
ATPAF1-208ENST00000526821 PSEN1P49768 467 aa12.26□□□□□ -0.45
ATPAF1-208ENST00000526821 PELP1Q8IZL8 1130 aaKnown RBP12.26□□□□□ -0.45
ATPAF1-208ENST00000526821 CCDC180Q9P1Z9 1646 aa12.25□□□□□ -0.45
ATPAF1-208ENST00000526821 RIOK3O14730 519 aaKnown RBP12.24□□□□□ -0.45
ATPAF1-208ENST00000526821 IER5LQ5T953 404 aa12.24□□□□□ -0.45
ATPAF1-208ENST00000526821 SEC24BO95487 1268 aa12.23□□□□□ -0.45
ATPAF1-208ENST00000526821 LHX8Q68G74 356 aa12.23□□□□□ -0.45
ATPAF1-208ENST00000526821 VGFO15240 615 aaPredicted RBP12.19□□□□□ -0.46
ATPAF1-208ENST00000526821 MKRN3Q13064 507 aaKnown RBP12.18□□□□□ -0.46
ATPAF1-208ENST00000526821 PKD2Q13563 968 aa12.17□□□□□ -0.46
ATPAF1-208ENST00000526821 PLCG2P16885 1265 aa12.15□□□□□ -0.46
ATPAF1-208ENST00000526821 RNF25Q96BH1 459 aaPredicted RBP12.12□□□□□ -0.47
ATPAF1-208ENST00000526821 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
ATPAF1-208ENST00000526821 MAMSTRQ6ZN01 415 aa12.1□□□□□ -0.47
ATPAF1-208ENST00000526821 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.09□□□□□ -0.47
ATPAF1-208ENST00000526821 ZFP91Q96JP5 570 aaPredicted RBP12.09□□□□□ -0.47
ATPAF1-208ENST00000526821 OCEL1Q9H607 264 aa12.09□□□□□ -0.47
ATPAF1-208ENST00000526821 RGL2O15211 777 aa12.06□□□□□ -0.48
ATPAF1-208ENST00000526821 IRX5P78411 483 aaPredicted RBP12.05□□□□□ -0.48
ATPAF1-208ENST00000526821 SCUBE2Q9NQ36 999 aa12.05□□□□□ -0.48
ATPAF1-208ENST00000526821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.05□□□□□ -0.48
ATPAF1-208ENST00000526821 COLQQ9Y215 455 aaPredicted RBP12.05□□□□□ -0.48
ATPAF1-208ENST00000526821 POTEFA5A3E0 1075 aa12.02□□□□□ -0.49
ATPAF1-208ENST00000526821 STK25O00506 426 aa12.02□□□□□ -0.49
ATPAF1-208ENST00000526821 POTEB2H3BUK9 544 aa12.01□□□□□ -0.49
ATPAF1-208ENST00000526821 BCL11BQ9C0K0 894 aaPredicted RBP12.01□□□□□ -0.49
ATPAF1-208ENST00000526821 STK24Q9Y6E0 443 aa12.01□□□□□ -0.49
ATPAF1-208ENST00000526821 EFCAB3Q8N7B9 438 aa11.99□□□□□ -0.49
ATPAF1-208ENST00000526821 G3V3G9 751 aa11.98□□□□□ -0.49
ATPAF1-208ENST00000526821 SOX12O15370 315 aa11.97□□□□□ -0.49
ATPAF1-208ENST00000526821 L3MBTL3Q96JM7 780 aaPredicted RBP11.97□□□□□ -0.49
ATPAF1-208ENST00000526821 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.49
ATPAF1-208ENST00000526821 OTUD5Q96G74 571 aa11.93□□□□□ -0.5
ATPAF1-208ENST00000526821 DCAF8L2P0C7V8 631 aa11.92□□□□□ -0.5
ATPAF1-208ENST00000526821 PDCD7Q8N8D1 485 aaKnown RBP11.92□□□□□ -0.5
ATPAF1-208ENST00000526821 C3orf67Q6ZVT6 689 aa11.9□□□□□ -0.5
ATPAF1-208ENST00000526821 POTEJP0CG39 1038 aa11.89□□□□□ -0.51
ATPAF1-208ENST00000526821 NLRP6P59044 892 aa11.89□□□□□ -0.51
ATPAF1-208ENST00000526821 ILDR1Q86SU0 546 aaPredicted RBP11.89□□□□□ -0.51
ATPAF1-208ENST00000526821 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.88□□□□□ -0.51
ATPAF1-208ENST00000526821 CHGAP10645 457 aaKnown RBP11.87□□□□□ -0.51
ATPAF1-208ENST00000526821 HS6ST3Q8IZP7 471 aa11.87□□□□□ -0.51
ATPAF1-208ENST00000526821 PHF8Q9UPP1 1060 aa11.85□□□□□ -0.51
ATPAF1-208ENST00000526821 BOLA1Q9Y3E2 137 aa11.84□□□□□ -0.51
ATPAF1-208ENST00000526821 SLAIN1Q8ND83 568 aa11.82□□□□□ -0.52
ATPAF1-208ENST00000526821 DPY19L2Q6NUT2 758 aa11.81□□□□□ -0.52
ATPAF1-208ENST00000526821 ZCCHC6Q5VYS8 1495 aaKnown RBP11.78□□□□□ -0.52
ATPAF1-208ENST00000526821 MFRPQ9BY79 579 aa11.78□□□□□ -0.52
ATPAF1-208ENST00000526821 RYDENQ9NUL5 291 aaKnown RBP11.78□□□□□ -0.52
ATPAF1-208ENST00000526821 FBXO22Q8NEZ5 403 aa11.75□□□□□ -0.53
ATPAF1-208ENST00000526821 MS4A4AQ96JQ5 239 aa11.75□□□□□ -0.53
ATPAF1-208ENST00000526821 RTN4Q9NQC3 1192 aaKnown RBP11.75□□□□□ -0.53
ATPAF1-208ENST00000526821 SNPHO15079 494 aa11.72□□□□□ -0.53
ATPAF1-208ENST00000526821 MICALL2Q8IY33 904 aa11.72□□□□□ -0.53
ATPAF1-208ENST00000526821 DNAJC5Q9H3Z4 198 aa11.72□□□□□ -0.53
ATPAF1-208ENST00000526821 TMEM121BQ9BXQ6 578 aaPredicted RBP11.71□□□□□ -0.53
ATPAF1-208ENST00000526821 FAM163AQ96GL9 167 aaPredicted RBP11.65□□□□□ -0.54
ATPAF1-208ENST00000526821 DCAF1Q9Y4B6 1507 aa11.64□□□□□ -0.55
ATPAF1-208ENST00000526821 NKX1-1Q15270 411 aaPredicted RBP11.59□□□□□ -0.55
ATPAF1-208ENST00000526821 ABCC9O60706 1549 aa11.57□□□□□ -0.56
ATPAF1-208ENST00000526821 BBXQ8WY36 941 aaPredicted RBP11.57□□□□□ -0.56
ATPAF1-208ENST00000526821 PPP1R37O75864 691 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms