RNA–Protein interactions for RNA: ENST00000526548.3

PICALM-205, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 1 (best)

Gene PICALM, Length 738 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-205ENST00000526548 CCDC61Q9Y6R9 512 aa13.86□□□□□ -0.19
PICALM-205ENST00000526548 NUBP1P53384 320 aa13.83□□□□□ -0.2
PICALM-205ENST00000526548 VASPP50552 380 aaPredicted RBP13.79□□□□□ -0.2
PICALM-205ENST00000526548 MS4A3Q96HJ5 214 aa13.79□□□□□ -0.2
PICALM-205ENST00000526548 KIF12Q96FN5 646 aa13.77□□□□□ -0.21
PICALM-205ENST00000526548 MAP3K13O43283 966 aa13.71□□□□□ -0.21
PICALM-205ENST00000526548 KLHL34Q8N239 644 aa13.71□□□□□ -0.21
PICALM-205ENST00000526548 LHX8Q68G74 356 aa13.7□□□□□ -0.22
PICALM-205ENST00000526548 FAM212AQ96EL1 285 aa13.68□□□□□ -0.22
PICALM-205ENST00000526548 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
PICALM-205ENST00000526548 DCAF8Q5TAQ9 597 aa13.65□□□□□ -0.22
PICALM-205ENST00000526548 ATMINO43313 823 aaPredicted RBP13.62□□□□□ -0.23
PICALM-205ENST00000526548 TRPC6Q9Y210 931 aa13.62□□□□□ -0.23
PICALM-205ENST00000526548 ASTLQ6HA08 431 aaPredicted RBP13.61□□□□□ -0.23
PICALM-205ENST00000526548 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
PICALM-205ENST00000526548 PCDHB13Q9Y5F0 798 aa13.59□□□□□ -0.23
PICALM-205ENST00000526548 SGIP1Q9BQI5 828 aa13.57□□□□□ -0.24
PICALM-205ENST00000526548 ATN1P54259 1190 aaPredicted RBP13.56□□□□□ -0.24
PICALM-205ENST00000526548 BMP2KQ9NSY1 1161 aaPredicted RBP13.55□□□□□ -0.24
PICALM-205ENST00000526548 PYGBP11216 843 aa13.54□□□□□ -0.24
PICALM-205ENST00000526548 IFNL1Q8IU54 200 aa13.53□□□□□ -0.24
PICALM-205ENST00000526548 TIE1P35590 1138 aa13.52□□□□□ -0.25
PICALM-205ENST00000526548 GSE1Q14687 1217 aa13.5□□□□□ -0.25
PICALM-205ENST00000526548 SPOCK2Q92563 424 aa13.5□□□□□ -0.25
PICALM-205ENST00000526548 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
PICALM-205ENST00000526548 SLC39A7Q92504 469 aa13.49□□□□□ -0.25
PICALM-205ENST00000526548 C7P10643 843 aa13.48□□□□□ -0.25
PICALM-205ENST00000526548 METRNQ9UJH8 293 aa13.48□□□□□ -0.25
PICALM-205ENST00000526548 TTLL13PA6NNM8 815 aa13.47□□□□□ -0.25
PICALM-205ENST00000526548 PCDHB8Q9UN66 801 aa13.42□□□□□ -0.26
PICALM-205ENST00000526548 CIZ1Q9ULV3 898 aaPredicted RBP13.4□□□□□ -0.26
PICALM-205ENST00000526548 TMEM106CQ9BVX2 250 aa13.39□□□□□ -0.27
PICALM-205ENST00000526548 TRIM35Q9UPQ4 493 aa13.39□□□□□ -0.27
PICALM-205ENST00000526548 CHRM1P11229 460 aaPredicted RBP13.38□□□□□ -0.27
PICALM-205ENST00000526548 POTEFA5A3E0 1075 aa13.37□□□□□ -0.27
PICALM-205ENST00000526548 OTUD5Q96G74 571 aa13.36□□□□□ -0.27
PICALM-205ENST00000526548 POTEJP0CG39 1038 aa13.34□□□□□ -0.27
PICALM-205ENST00000526548 ZNF467Q7Z7K2 595 aaPredicted RBP13.31□□□□□ -0.28
PICALM-205ENST00000526548 COLQQ9Y215 455 aaPredicted RBP13.31□□□□□ -0.28
PICALM-205ENST00000526548 SEC24BO95487 1268 aa13.29□□□□□ -0.28
PICALM-205ENST00000526548 IER5LQ5T953 404 aa13.28□□□□□ -0.28
PICALM-205ENST00000526548 PSEN1P49768 467 aa13.21□□□□□ -0.29
PICALM-205ENST00000526548 MAMSTRQ6ZN01 415 aa13.2□□□□□ -0.3
PICALM-205ENST00000526548 IRX5P78411 483 aaPredicted RBP13.18□□□□□ -0.3
PICALM-205ENST00000526548 PLCG2P16885 1265 aa13.16□□□□□ -0.3
PICALM-205ENST00000526548 PDAP1Q13442 181 aaKnown RBP13.16□□□□□ -0.3
PICALM-205ENST00000526548 TRIM41Q8WV44 630 aa13.16□□□□□ -0.3
PICALM-205ENST00000526548 SCUBE2Q9NQ36 999 aa13.15□□□□□ -0.3
PICALM-205ENST00000526548 OCEL1Q9H607 264 aa13.13□□□□□ -0.31
PICALM-205ENST00000526548 GOLGA2Q08379 1002 aa13.11□□□□□ -0.31
PICALM-205ENST00000526548 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
PICALM-205ENST00000526548 CABP2Q9NPB3 220 aa13.06□□□□□ -0.32
PICALM-205ENST00000526548 RNF25Q96BH1 459 aaPredicted RBP13.05□□□□□ -0.32
PICALM-205ENST00000526548 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
PICALM-205ENST00000526548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.03□□□□□ -0.32
PICALM-205ENST00000526548 RIOK3O14730 519 aaKnown RBP13.02□□□□□ -0.33
PICALM-205ENST00000526548 SLAIN1Q8ND83 568 aa12.97□□□□□ -0.33
PICALM-205ENST00000526548 ILDR1Q86SU0 546 aaPredicted RBP12.96□□□□□ -0.33
PICALM-205ENST00000526548 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.95□□□□□ -0.34
PICALM-205ENST00000526548 PKD2Q13563 968 aa12.95□□□□□ -0.34
PICALM-205ENST00000526548 DPY19L2Q6NUT2 758 aa12.95□□□□□ -0.34
PICALM-205ENST00000526548 FAM163AQ96GL9 167 aaPredicted RBP12.95□□□□□ -0.34
PICALM-205ENST00000526548 ZFP91Q96JP5 570 aaPredicted RBP12.95□□□□□ -0.34
PICALM-205ENST00000526548 VGFO15240 615 aaPredicted RBP12.94□□□□□ -0.34
PICALM-205ENST00000526548 EFCAB3Q8N7B9 438 aa12.94□□□□□ -0.34
PICALM-205ENST00000526548 ECM2O94769 699 aaPredicted RBP12.93□□□□□ -0.34
PICALM-205ENST00000526548 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
PICALM-205ENST00000526548 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.9□□□□□ -0.34
PICALM-205ENST00000526548 LCE2DQ5TA82 110 aaPredicted RBP12.89□□□□□ -0.35
PICALM-205ENST00000526548 POTEMA6NI47 508 aa12.86□□□□□ -0.35
PICALM-205ENST00000526548 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
PICALM-205ENST00000526548 RGL2O15211 777 aa12.84□□□□□ -0.35
PICALM-205ENST00000526548 C3orf67Q6ZVT6 689 aa12.83□□□□□ -0.36
PICALM-205ENST00000526548 TAOK2Q9UL54 1235 aa12.83□□□□□ -0.36
PICALM-205ENST00000526548 SOX12O15370 315 aa12.82□□□□□ -0.36
PICALM-205ENST00000526548 BCL11BQ9C0K0 894 aaPredicted RBP12.81□□□□□ -0.36
PICALM-205ENST00000526548 BOLA1Q9Y3E2 137 aa12.81□□□□□ -0.36
PICALM-205ENST00000526548 STK24Q9Y6E0 443 aa12.79□□□□□ -0.36
PICALM-205ENST00000526548 PHF8Q9UPP1 1060 aa12.78□□□□□ -0.36
PICALM-205ENST00000526548 G3V3G9 751 aa12.77□□□□□ -0.37
PICALM-205ENST00000526548 STK25O00506 426 aa12.76□□□□□ -0.37
PICALM-205ENST00000526548 ST18O60284 1047 aa12.75□□□□□ -0.37
PICALM-205ENST00000526548 MS4A4AQ96JQ5 239 aa12.75□□□□□ -0.37
PICALM-205ENST00000526548 TMEM121BQ9BXQ6 578 aaPredicted RBP12.73□□□□□ -0.37
PICALM-205ENST00000526548 PLSCR2Q9NRY7 297 aa12.73□□□□□ -0.37
PICALM-205ENST00000526548 SNPHO15079 494 aa12.71□□□□□ -0.37
PICALM-205ENST00000526548 NLRP6P59044 892 aa12.69□□□□□ -0.38
PICALM-205ENST00000526548 MICALL2Q8IY33 904 aa12.68□□□□□ -0.38
PICALM-205ENST00000526548 FBXO22Q8NEZ5 403 aa12.68□□□□□ -0.38
PICALM-205ENST00000526548 MFRPQ9BY79 579 aa12.67□□□□□ -0.38
PICALM-205ENST00000526548 PCDH10Q9P2E7 1040 aa12.62□□□□□ -0.39
PICALM-205ENST00000526548 TMEM92Q6UXU6 159 aa12.61□□□□□ -0.39
PICALM-205ENST00000526548 MARVELD3Q96A59 401 aa12.58□□□□□ -0.4
PICALM-205ENST00000526548 HOXB3P14651 431 aaPredicted RBP12.57□□□□□ -0.4
PICALM-205ENST00000526548 CDAN1Q8IWY9 1227 aa12.55□□□□□ -0.4
PICALM-205ENST00000526548 HS6ST3Q8IZP7 471 aa12.54□□□□□ -0.4
PICALM-205ENST00000526548 CHGAP10645 457 aaKnown RBP12.53□□□□□ -0.4
PICALM-205ENST00000526548 PPP1R37O75864 691 aa12.5□□□□□ -0.41
PICALM-205ENST00000526548 DOK7Q18PE1 504 aa12.48□□□□□ -0.41
PICALM-205ENST00000526548 EMP3P54852 163 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms