RNA–Protein interactions for RNA: ENST00000526245.1

ATXN3-213, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 352 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-213ENST00000526245 DCAF8L2P0C7V8 631 aa9.43□□□□□ -0.9
ATXN3-213ENST00000526245 CD44P16070 742 aaKnown RBP9.43□□□□□ -0.9
ATXN3-213ENST00000526245 PAK3O75914 559 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-213ENST00000526245 C19orf67A6NJJ6 358 aa9.41□□□□□ -0.9
ATXN3-213ENST00000526245 HAX1O00165 279 aa9.4□□□□□ -0.9
ATXN3-213ENST00000526245 ECM2O94769 699 aaPredicted RBP9.39□□□□□ -0.91
ATXN3-213ENST00000526245 ZRANB1Q9UGI0 708 aa9.39□□□□□ -0.91
ATXN3-213ENST00000526245 CCDC61Q9Y6R9 512 aa9.38□□□□□ -0.91
ATXN3-213ENST00000526245 TRIM41Q8WV44 630 aa9.37□□□□□ -0.91
ATXN3-213ENST00000526245 PYGBP11216 843 aa9.36□□□□□ -0.91
ATXN3-213ENST00000526245 EVX2Q03828 476 aa9.33□□□□□ -0.92
ATXN3-213ENST00000526245 BCANQ96GW7 911 aa9.32□□□□□ -0.92
ATXN3-213ENST00000526245 CHRM1P11229 460 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-213ENST00000526245 HAP1P54257 671 aaPredicted RBP9.31□□□□□ -0.92
ATXN3-213ENST00000526245 PHF12Q96QT6 1004 aa9.31□□□□□ -0.92
ATXN3-213ENST00000526245 RGL2O15211 777 aa9.3□□□□□ -0.92
ATXN3-213ENST00000526245 ZNF579Q8NAF0 562 aaKnown RBP9.3□□□□□ -0.92
ATXN3-213ENST00000526245 RNF25Q96BH1 459 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-213ENST00000526245 KIF12Q96FN5 646 aa9.28□□□□□ -0.92
ATXN3-213ENST00000526245 MAP3K13O43283 966 aa9.26□□□□□ -0.93
ATXN3-213ENST00000526245 RIOK3O14730 519 aaKnown RBP9.24□□□□□ -0.93
ATXN3-213ENST00000526245 PCDHB13Q9Y5F0 798 aa9.24□□□□□ -0.93
ATXN3-213ENST00000526245 VSIG10Q8N0Z9 540 aa9.23□□□□□ -0.93
ATXN3-213ENST00000526245 ZNF467Q7Z7K2 595 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-213ENST00000526245 PCDHB8Q9UN66 801 aa9.22□□□□□ -0.93
ATXN3-213ENST00000526245 PRKCSHP14314 528 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-213ENST00000526245 IFNL1Q8IU54 200 aa9.21□□□□□ -0.94
ATXN3-213ENST00000526245 SGIP1Q9BQI5 828 aa9.21□□□□□ -0.94
ATXN3-213ENST00000526245 TAOK2Q9UL54 1235 aa9.21□□□□□ -0.94
ATXN3-213ENST00000526245 MS4A3Q96HJ5 214 aa9.19□□□□□ -0.94
ATXN3-213ENST00000526245 VGFO15240 615 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-213ENST00000526245 GALR2O43603 387 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-213ENST00000526245 CLCN6P51797 869 aa9.16□□□□□ -0.94
ATXN3-213ENST00000526245 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-213ENST00000526245 GABBR2O75899 941 aa9.14□□□□□ -0.95
ATXN3-213ENST00000526245 PDAP1Q13442 181 aaKnown RBP9.14□□□□□ -0.95
ATXN3-213ENST00000526245 SP7Q8TDD2 431 aaPredicted RBP9.14□□□□□ -0.95
ATXN3-213ENST00000526245 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-213ENST00000526245 CHGAP10645 457 aaKnown RBP9.13□□□□□ -0.95
ATXN3-213ENST00000526245 ZFP91Q96JP5 570 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-213ENST00000526245 TRPC6Q9Y210 931 aa9.13□□□□□ -0.95
ATXN3-213ENST00000526245 PSEN1P49768 467 aa9.12□□□□□ -0.95
ATXN3-213ENST00000526245 STK25O00506 426 aa9.11□□□□□ -0.95
ATXN3-213ENST00000526245 HS6ST3Q8IZP7 471 aa9.09□□□□□ -0.95
ATXN3-213ENST00000526245 BCL11BQ9C0K0 894 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-213ENST00000526245 BBXQ8WY36 941 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-213ENST00000526245 STK24Q9Y6E0 443 aa9.08□□□□□ -0.96
ATXN3-213ENST00000526245 TMEM106CQ9BVX2 250 aa9.07□□□□□ -0.96
ATXN3-213ENST00000526245 TIE1P35590 1138 aa9.06□□□□□ -0.96
ATXN3-213ENST00000526245 BMP2KQ9NSY1 1161 aaPredicted RBP9.06□□□□□ -0.96
ATXN3-213ENST00000526245 TTLL13PA6NNM8 815 aa9.05□□□□□ -0.96
ATXN3-213ENST00000526245 TPRNQ4KMQ1 711 aa9.05□□□□□ -0.96
ATXN3-213ENST00000526245 CFAP44Q96MT7 982 aa9.05□□□□□ -0.96
ATXN3-213ENST00000526245 PAXIP1Q6ZW49 1069 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-213ENST00000526245 DCBLD2Q96PD2 775 aa9.02□□□□□ -0.97
ATXN3-213ENST00000526245 CABP2Q9NPB3 220 aa9.02□□□□□ -0.97
ATXN3-213ENST00000526245 ATMINO43313 823 aaPredicted RBP9□□□□□ -0.97
ATXN3-213ENST00000526245 ASTLQ6HA08 431 aaPredicted RBP9□□□□□ -0.97
ATXN3-213ENST00000526245 KDM2AQ9Y2K7 1162 aa9□□□□□ -0.97
ATXN3-213ENST00000526245 ATN1P54259 1190 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-213ENST00000526245 GOLGA2Q08379 1002 aa8.99□□□□□ -0.97
ATXN3-213ENST00000526245 DNAJC5Q9H3Z4 198 aa8.99□□□□□ -0.97
ATXN3-213ENST00000526245 TRIM35Q9UPQ4 493 aa8.99□□□□□ -0.97
ATXN3-213ENST00000526245 NKX1-1Q15270 411 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-213ENST00000526245 SPRYD3Q8NCJ5 442 aa8.98□□□□□ -0.97
ATXN3-213ENST00000526245 EFCAB3Q8N7B9 438 aa8.97□□□□□ -0.97
ATXN3-213ENST00000526245 POTEIP0CG38 1075 aa8.95□□□□□ -0.98
ATXN3-213ENST00000526245 MKRN3Q13064 507 aaKnown RBP8.95□□□□□ -0.98
ATXN3-213ENST00000526245 PELP1Q8IZL8 1130 aaKnown RBP8.94□□□□□ -0.98
ATXN3-213ENST00000526245 SOX12O15370 315 aa8.91□□□□□ -0.98
ATXN3-213ENST00000526245 MFRPQ9BY79 579 aa8.91□□□□□ -0.98
ATXN3-213ENST00000526245 PHF8Q9UPP1 1060 aa8.9□□□□□ -0.98
ATXN3-213ENST00000526245 GTPBP6O43824 516 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-213ENST00000526245 IER5LQ5T953 404 aa8.89□□□□□ -0.99
ATXN3-213ENST00000526245 NLRP6P59044 892 aa8.88□□□□□ -0.99
ATXN3-213ENST00000526245 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.88□□□□□ -0.993e-6■■□□□ 13.5
ATXN3-213ENST00000526245 FBXO22Q8NEZ5 403 aa8.87□□□□□ -0.99
ATXN3-213ENST00000526245 SLC39A7Q92504 469 aa8.87□□□□□ -0.99
ATXN3-213ENST00000526245 RYDENQ9NUL5 291 aaKnown RBP8.87□□□□□ -0.99
ATXN3-213ENST00000526245 C7P10643 843 aa8.85□□□□□ -0.99
ATXN3-213ENST00000526245 IRX5P78411 483 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-213ENST00000526245 MS4A4AQ96JQ5 239 aa8.85□□□□□ -0.99
ATXN3-213ENST00000526245 METRNQ9UJH8 293 aa8.85□□□□□ -0.99
ATXN3-213ENST00000526245 ILDR1Q86SU0 546 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-213ENST00000526245 TSHZ2Q9NRE2 1034 aa8.84□□□□□ -0.99
ATXN3-213ENST00000526245 SEC24BO95487 1268 aa8.83□□□□□ -1
ATXN3-213ENST00000526245 PDCD7Q8N8D1 485 aaKnown RBP8.83□□□□□ -1
ATXN3-213ENST00000526245 OCEL1Q9H607 264 aa8.83□□□□□ -1
ATXN3-213ENST00000526245 COLQQ9Y215 455 aaPredicted RBP8.83□□□□□ -1
ATXN3-213ENST00000526245 PLCG2P16885 1265 aa8.82□□□□□ -1
ATXN3-213ENST00000526245 PPP1R37O75864 691 aa8.8□□□□□ -1
ATXN3-213ENST00000526245 DPY19L2Q6NUT2 758 aa8.8□□□□□ -1
ATXN3-213ENST00000526245 POTEFA5A3E0 1075 aa8.79□□□□□ -1
ATXN3-213ENST00000526245 NBR1Q14596 966 aa8.75□□□□□ -1.01
ATXN3-213ENST00000526245 ERICH6Q7L0X2 663 aa8.72□□□□□ -1.01
ATXN3-213ENST00000526245 L3MBTL3Q96JM7 780 aaPredicted RBP8.72□□□□□ -1.01
ATXN3-213ENST00000526245 BOLA1Q9Y3E2 137 aa8.72□□□□□ -1.01
ATXN3-213ENST00000526245 G3V3G9 751 aa8.71□□□□□ -1.02
ATXN3-213ENST00000526245 MICALL2Q8IY33 904 aa8.71□□□□□ -1.02
ATXN3-213ENST00000526245 TIMELESSQ9UNS1 1208 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms