RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 CCDC61Q9Y6R9 512 aa16.93■□□□□ 0.3
COPB1-204ENST00000526191 SPOCK2Q92563 424 aa16.9■□□□□ 0.3
COPB1-204ENST00000526191 FAM212AQ96EL1 285 aa16.89■□□□□ 0.29
COPB1-204ENST00000526191 DCAF8Q5TAQ9 597 aa16.85■□□□□ 0.29
COPB1-204ENST00000526191 GALR2O43603 387 aaPredicted RBP16.81■□□□□ 0.28
COPB1-204ENST00000526191 CLCN6P51797 869 aa16.79■□□□□ 0.28
COPB1-204ENST00000526191 KIF12Q96FN5 646 aa16.78■□□□□ 0.28
COPB1-204ENST00000526191 MS4A3Q96HJ5 214 aa16.76■□□□□ 0.27
COPB1-204ENST00000526191 MAP3K13O43283 966 aa16.74■□□□□ 0.27
COPB1-204ENST00000526191 GSE1Q14687 1217 aa16.74■□□□□ 0.27
COPB1-204ENST00000526191 CIZ1Q9ULV3 898 aaPredicted RBP16.71■□□□□ 0.27
COPB1-204ENST00000526191 PYGBP11216 843 aa16.7■□□□□ 0.26
COPB1-204ENST00000526191 POTEIP0CG38 1075 aa16.65■□□□□ 0.26
COPB1-204ENST00000526191 PCDHB13Q9Y5F0 798 aa16.64■□□□□ 0.25
COPB1-204ENST00000526191 DCBLD2Q96PD2 775 aa16.61■□□□□ 0.25
COPB1-204ENST00000526191 TRPC6Q9Y210 931 aa16.61■□□□□ 0.25
COPB1-204ENST00000526191 IFNL1Q8IU54 200 aa16.58■□□□□ 0.24
COPB1-204ENST00000526191 SGIP1Q9BQI5 828 aa16.58■□□□□ 0.24
COPB1-204ENST00000526191 CHRM1P11229 460 aaPredicted RBP16.54■□□□□ 0.24
COPB1-204ENST00000526191 PCDHB8Q9UN66 801 aa16.52■□□□□ 0.24
COPB1-204ENST00000526191 BMP2KQ9NSY1 1161 aaPredicted RBP16.48■□□□□ 0.23
COPB1-204ENST00000526191 ATMINO43313 823 aaPredicted RBP16.46■□□□□ 0.23
COPB1-204ENST00000526191 ASTLQ6HA08 431 aaPredicted RBP16.46■□□□□ 0.23
COPB1-204ENST00000526191 TIE1P35590 1138 aa16.45■□□□□ 0.22
COPB1-204ENST00000526191 TRIM41Q8WV44 630 aa16.45■□□□□ 0.22
COPB1-204ENST00000526191 PELP1Q8IZL8 1130 aaKnown RBP16.44■□□□□ 0.22
COPB1-204ENST00000526191 ATN1P54259 1190 aaPredicted RBP16.42■□□□□ 0.22
COPB1-204ENST00000526191 ZNF467Q7Z7K2 595 aaPredicted RBP16.42■□□□□ 0.22
COPB1-204ENST00000526191 TTLL13PA6NNM8 815 aa16.4■□□□□ 0.22
COPB1-204ENST00000526191 PKD2Q13563 968 aa16.4■□□□□ 0.22
COPB1-204ENST00000526191 TMEM106CQ9BVX2 250 aa16.37■□□□□ 0.21
COPB1-204ENST00000526191 RNF25Q96BH1 459 aaPredicted RBP16.35■□□□□ 0.21
COPB1-204ENST00000526191 ECM2O94769 699 aaPredicted RBP16.34■□□□□ 0.21
COPB1-204ENST00000526191 PSEN1P49768 467 aa16.3■□□□□ 0.2
COPB1-204ENST00000526191 TRIM35Q9UPQ4 493 aa16.3■□□□□ 0.2
COPB1-204ENST00000526191 PDAP1Q13442 181 aaKnown RBP16.27■□□□□ 0.2
COPB1-204ENST00000526191 RIOK3O14730 519 aaKnown RBP16.25■□□□□ 0.19
COPB1-204ENST00000526191 SLC39A7Q92504 469 aa16.25■□□□□ 0.19
COPB1-204ENST00000526191 METRNQ9UJH8 293 aa16.24■□□□□ 0.19
COPB1-204ENST00000526191 RGL2O15211 777 aa16.23■□□□□ 0.19
COPB1-204ENST00000526191 C7P10643 843 aa16.2■□□□□ 0.18
COPB1-204ENST00000526191 POTEFA5A3E0 1075 aa16.16■□□□□ 0.18
COPB1-204ENST00000526191 VGFO15240 615 aaPredicted RBP16.16■□□□□ 0.18
COPB1-204ENST00000526191 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.14■□□□□ 0.17
COPB1-204ENST00000526191 LHX8Q68G74 356 aa16.14■□□□□ 0.17
COPB1-204ENST00000526191 ZFP91Q96JP5 570 aaPredicted RBP16.14■□□□□ 0.17
COPB1-204ENST00000526191 POTEB2H3BUK9 544 aa16.12■□□□□ 0.17
COPB1-204ENST00000526191 IER5LQ5T953 404 aa16.12■□□□□ 0.17
COPB1-204ENST00000526191 COLQQ9Y215 455 aaPredicted RBP16.12■□□□□ 0.17
COPB1-204ENST00000526191 CABP2Q9NPB3 220 aa16.11■□□□□ 0.17
COPB1-204ENST00000526191 GOLGA2Q08379 1002 aa16.08■□□□□ 0.16
COPB1-204ENST00000526191 SEC24BO95487 1268 aa16.07■□□□□ 0.16
COPB1-204ENST00000526191 IRX5P78411 483 aaPredicted RBP16.06■□□□□ 0.16
COPB1-204ENST00000526191 MKRN3Q13064 507 aaKnown RBP16.05■□□□□ 0.16
COPB1-204ENST00000526191 TAOK2Q9UL54 1235 aa16.03■□□□□ 0.16
COPB1-204ENST00000526191 BCL11BQ9C0K0 894 aaPredicted RBP16.01■□□□□ 0.15
COPB1-204ENST00000526191 POTEJP0CG39 1038 aa16■□□□□ 0.15
COPB1-204ENST00000526191 PLCG2P16885 1265 aa16■□□□□ 0.15
COPB1-204ENST00000526191 EFCAB3Q8N7B9 438 aa16■□□□□ 0.15
COPB1-204ENST00000526191 STK25O00506 426 aa15.98■□□□□ 0.15
COPB1-204ENST00000526191 OCEL1Q9H607 264 aa15.98■□□□□ 0.15
COPB1-204ENST00000526191 STK24Q9Y6E0 443 aa15.98■□□□□ 0.15
COPB1-204ENST00000526191 RTN4Q9NQC3 1192 aaKnown RBP15.96■□□□□ 0.15
COPB1-204ENST00000526191 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.96■□□□□ 0.156e-9■■■□□ 15.3
COPB1-204ENST00000526191 AMER1Q5JTC6 1135 aaPredicted RBP15.94■□□□□ 0.14
COPB1-204ENST00000526191 PDCD7Q8N8D1 485 aaKnown RBP15.94■□□□□ 0.14
COPB1-204ENST00000526191 ILDR1Q86SU0 546 aaPredicted RBP15.9■□□□□ 0.14
COPB1-204ENST00000526191 OTUD5Q96G74 571 aa15.89■□□□□ 0.13
COPB1-204ENST00000526191 DPY19L2Q6NUT2 758 aa15.85■□□□□ 0.13
COPB1-204ENST00000526191 SOX12O15370 315 aa15.84■□□□□ 0.13
COPB1-204ENST00000526191 CHGAP10645 457 aaKnown RBP15.84■□□□□ 0.13
COPB1-204ENST00000526191 HS6ST3Q8IZP7 471 aa15.84■□□□□ 0.13
COPB1-204ENST00000526191 PHF8Q9UPP1 1060 aa15.84■□□□□ 0.13
COPB1-204ENST00000526191 DCAF8L2P0C7V8 631 aa15.83■□□□□ 0.12
COPB1-204ENST00000526191 MAMSTRQ6ZN01 415 aa15.79■□□□□ 0.12
COPB1-204ENST00000526191 MS4A4AQ96JQ5 239 aa15.79■□□□□ 0.12
COPB1-204ENST00000526191 SCUBE2Q9NQ36 999 aa15.79■□□□□ 0.12
COPB1-204ENST00000526191 MFRPQ9BY79 579 aa15.77■□□□□ 0.12
COPB1-204ENST00000526191 FBXO22Q8NEZ5 403 aa15.75■□□□□ 0.11
COPB1-204ENST00000526191 L3MBTL3Q96JM7 780 aaPredicted RBP15.74■□□□□ 0.11
COPB1-204ENST00000526191 NLRP6P59044 892 aa15.73■□□□□ 0.11
COPB1-204ENST00000526191 BOLA1Q9Y3E2 137 aa15.68■□□□□ 0.1
COPB1-204ENST00000526191 NKX1-1Q15270 411 aaPredicted RBP15.67■□□□□ 0.1
COPB1-204ENST00000526191 DNAJC5Q9H3Z4 198 aa15.65■□□□□ 0.1
COPB1-204ENST00000526191 G3V3G9 751 aa15.63■□□□□ 0.09
COPB1-204ENST00000526191 C3orf67Q6ZVT6 689 aa15.63■□□□□ 0.09
COPB1-204ENST00000526191 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.63■□□□□ 0.09
COPB1-204ENST00000526191 SLAIN1Q8ND83 568 aa15.62■□□□□ 0.09
COPB1-204ENST00000526191 MICALL2Q8IY33 904 aa15.61■□□□□ 0.09
COPB1-204ENST00000526191 TMEM121BQ9BXQ6 578 aaPredicted RBP15.6■□□□□ 0.09
COPB1-204ENST00000526191 PPP1R37O75864 691 aa15.57■□□□□ 0.08
COPB1-204ENST00000526191 TMEM92Q6UXU6 159 aa15.47■□□□□ 0.07
COPB1-204ENST00000526191 GTPBP6O43824 516 aaPredicted RBP15.46■□□□□ 0.07
COPB1-204ENST00000526191 BBXQ8WY36 941 aaPredicted RBP15.41■□□□□ 0.06
COPB1-204ENST00000526191 RYDENQ9NUL5 291 aaKnown RBP15.41■□□□□ 0.06
COPB1-204ENST00000526191 FAM163AQ96GL9 167 aaPredicted RBP15.39■□□□□ 0.05
COPB1-204ENST00000526191 LCE2DQ5TA82 110 aaPredicted RBP15.36■□□□□ 0.05
COPB1-204ENST00000526191 C2orf72A6NCS6 295 aa15.3■□□□□ 0.04
COPB1-204ENST00000526191 SNPHO15079 494 aa15.3■□□□□ 0.04
COPB1-204ENST00000526191 KIF3CO14782 793 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms