RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 ZBTB47Q9UFB7 747 aaPredicted RBP15.06■□□□□ 0
CSDE1-210ENST00000525878 NUBP1P53384 320 aa15.02■□□□□ -0
CSDE1-210ENST00000525878 MS4A3Q96HJ5 214 aa15.02■□□□□ -0
CSDE1-210ENST00000525878 LHX8Q68G74 356 aa15.01□□□□□ -0.01
CSDE1-210ENST00000525878 KIF12Q96FN5 646 aa14.99□□□□□ -0.01
CSDE1-210ENST00000525878 ASTLQ6HA08 431 aaPredicted RBP14.91□□□□□ -0.02
CSDE1-210ENST00000525878 VASPP50552 380 aaPredicted RBP14.9□□□□□ -0.02
CSDE1-210ENST00000525878 MAP3K13O43283 966 aa14.89□□□□□ -0.03
CSDE1-210ENST00000525878 PELP1Q8IZL8 1130 aaKnown RBP14.89□□□□□ -0.03
CSDE1-210ENST00000525878 ATMINO43313 823 aaPredicted RBP14.87□□□□□ -0.03
CSDE1-210ENST00000525878 FAM212AQ96EL1 285 aa14.84□□□□□ -0.03
CSDE1-210ENST00000525878 SGIP1Q9BQI5 828 aa14.83□□□□□ -0.04
CSDE1-210ENST00000525878 TRPC6Q9Y210 931 aa14.81□□□□□ -0.04
CSDE1-210ENST00000525878 BMP2KQ9NSY1 1161 aaPredicted RBP14.77□□□□□ -0.05
CSDE1-210ENST00000525878 TIE1P35590 1138 aa14.76□□□□□ -0.05
CSDE1-210ENST00000525878 ATN1P54259 1190 aaPredicted RBP14.76□□□□□ -0.05
CSDE1-210ENST00000525878 POTEB2H3BUK9 544 aa14.75□□□□□ -0.05
CSDE1-210ENST00000525878 SLC39A7Q92504 469 aa14.74□□□□□ -0.05
CSDE1-210ENST00000525878 PCDHB13Q9Y5F0 798 aa14.74□□□□□ -0.05
CSDE1-210ENST00000525878 C7P10643 843 aa14.73□□□□□ -0.05
CSDE1-210ENST00000525878 KLHL34Q8N239 644 aa14.73□□□□□ -0.05
CSDE1-210ENST00000525878 DCAF8Q5TAQ9 597 aa14.72□□□□□ -0.05
CSDE1-210ENST00000525878 METRNQ9UJH8 293 aa14.72□□□□□ -0.05
CSDE1-210ENST00000525878 IFNL1Q8IU54 200 aa14.7□□□□□ -0.06
CSDE1-210ENST00000525878 TTLL13PA6NNM8 815 aa14.68□□□□□ -0.06
CSDE1-210ENST00000525878 IFNLR1Q8IU57 520 aaPredicted RBP14.68□□□□□ -0.06
CSDE1-210ENST00000525878 PYGBP11216 843 aa14.64□□□□□ -0.07
CSDE1-210ENST00000525878 GSE1Q14687 1217 aa14.63□□□□□ -0.07
CSDE1-210ENST00000525878 OTUD5Q96G74 571 aa14.63□□□□□ -0.07
CSDE1-210ENST00000525878 POTEFA5A3E0 1075 aa14.6□□□□□ -0.07
CSDE1-210ENST00000525878 POTEJP0CG39 1038 aa14.58□□□□□ -0.08
CSDE1-210ENST00000525878 SPOCK2Q92563 424 aa14.57□□□□□ -0.08
CSDE1-210ENST00000525878 TRIM35Q9UPQ4 493 aa14.56□□□□□ -0.08
CSDE1-210ENST00000525878 CHRM1P11229 460 aaPredicted RBP14.55□□□□□ -0.08
CSDE1-210ENST00000525878 IER5LQ5T953 404 aa14.53□□□□□ -0.08
CSDE1-210ENST00000525878 TMEM106CQ9BVX2 250 aa14.53□□□□□ -0.08
CSDE1-210ENST00000525878 PCDHB8Q9UN66 801 aa14.52□□□□□ -0.09
CSDE1-210ENST00000525878 COLQQ9Y215 455 aaPredicted RBP14.5□□□□□ -0.09
CSDE1-210ENST00000525878 MAMSTRQ6ZN01 415 aa14.45□□□□□ -0.1
CSDE1-210ENST00000525878 ZNF467Q7Z7K2 595 aaPredicted RBP14.45□□□□□ -0.1
CSDE1-210ENST00000525878 SEC24BO95487 1268 aa14.43□□□□□ -0.1
CSDE1-210ENST00000525878 CIZ1Q9ULV3 898 aaPredicted RBP14.41□□□□□ -0.1
CSDE1-210ENST00000525878 IRX5P78411 483 aaPredicted RBP14.39□□□□□ -0.11
CSDE1-210ENST00000525878 SCUBE2Q9NQ36 999 aa14.36□□□□□ -0.11
CSDE1-210ENST00000525878 PSEN1P49768 467 aa14.32□□□□□ -0.12
CSDE1-210ENST00000525878 PLCG2P16885 1265 aa14.31□□□□□ -0.12
CSDE1-210ENST00000525878 OCEL1Q9H607 264 aa14.3□□□□□ -0.12
CSDE1-210ENST00000525878 TRIM41Q8WV44 630 aa14.29□□□□□ -0.12
CSDE1-210ENST00000525878 PDAP1Q13442 181 aaKnown RBP14.28□□□□□ -0.12
CSDE1-210ENST00000525878 PDCD7Q8N8D1 485 aaKnown RBP14.21□□□□□ -0.13
CSDE1-210ENST00000525878 MKRN3Q13064 507 aaKnown RBP14.2□□□□□ -0.14
CSDE1-210ENST00000525878 ILDR1Q86SU0 546 aaPredicted RBP14.19□□□□□ -0.14
CSDE1-210ENST00000525878 GOLGA2Q08379 1002 aa14.18□□□□□ -0.14
CSDE1-210ENST00000525878 LCE2DQ5TA82 110 aaPredicted RBP14.17□□□□□ -0.14
CSDE1-210ENST00000525878 RNF25Q96BH1 459 aaPredicted RBP14.14□□□□□ -0.15
CSDE1-210ENST00000525878 CABP2Q9NPB3 220 aa14.13□□□□□ -0.15
CSDE1-210ENST00000525878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.12□□□□□ -0.152e-11■□□□□ 9.9
CSDE1-210ENST00000525878 SLAIN1Q8ND83 568 aa14.11□□□□□ -0.15
CSDE1-210ENST00000525878 POTEMA6NI47 508 aa14.1□□□□□ -0.15
CSDE1-210ENST00000525878 RIOK3O14730 519 aaKnown RBP14.08□□□□□ -0.16
CSDE1-210ENST00000525878 POTEGQ6S5H5 508 aa14.08□□□□□ -0.16
CSDE1-210ENST00000525878 FAM163AQ96GL9 167 aaPredicted RBP14.07□□□□□ -0.16
CSDE1-210ENST00000525878 L3MBTL3Q96JM7 780 aaPredicted RBP14.06□□□□□ -0.16
CSDE1-210ENST00000525878 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.04□□□□□ -0.16
CSDE1-210ENST00000525878 VGFO15240 615 aaPredicted RBP14.01□□□□□ -0.17
CSDE1-210ENST00000525878 DPY19L2Q6NUT2 758 aa14.01□□□□□ -0.17
CSDE1-210ENST00000525878 EFCAB3Q8N7B9 438 aa14□□□□□ -0.17
CSDE1-210ENST00000525878 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.99□□□□□ -0.17
CSDE1-210ENST00000525878 ZFP91Q96JP5 570 aaPredicted RBP13.99□□□□□ -0.17
CSDE1-210ENST00000525878 C3orf67Q6ZVT6 689 aa13.95□□□□□ -0.18
CSDE1-210ENST00000525878 PKD2Q13563 968 aa13.94□□□□□ -0.18
CSDE1-210ENST00000525878 ST18O60284 1047 aa13.92□□□□□ -0.18
CSDE1-210ENST00000525878 BOLA1Q9Y3E2 137 aa13.92□□□□□ -0.18
CSDE1-210ENST00000525878 PCDH10Q9P2E7 1040 aa13.91□□□□□ -0.18
CSDE1-210ENST00000525878 SOX12O15370 315 aa13.9□□□□□ -0.18
CSDE1-210ENST00000525878 ECM2O94769 699 aaPredicted RBP13.9□□□□□ -0.18
CSDE1-210ENST00000525878 TMEM121BQ9BXQ6 578 aaPredicted RBP13.9□□□□□ -0.18
CSDE1-210ENST00000525878 SNPHO15079 494 aa13.88□□□□□ -0.19
CSDE1-210ENST00000525878 TAOK2Q9UL54 1235 aa13.88□□□□□ -0.19
CSDE1-210ENST00000525878 MS4A4AQ96JQ5 239 aa13.85□□□□□ -0.19
CSDE1-210ENST00000525878 BCL11BQ9C0K0 894 aaPredicted RBP13.84□□□□□ -0.19
CSDE1-210ENST00000525878 G3V3G9 751 aa13.83□□□□□ -0.2
CSDE1-210ENST00000525878 RGL2O15211 777 aa13.83□□□□□ -0.2
CSDE1-210ENST00000525878 PHF8Q9UPP1 1060 aa13.83□□□□□ -0.2
CSDE1-210ENST00000525878 STK24Q9Y6E0 443 aa13.78□□□□□ -0.2
CSDE1-210ENST00000525878 MICALL2Q8IY33 904 aa13.77□□□□□ -0.21
CSDE1-210ENST00000525878 FBXO22Q8NEZ5 403 aa13.77□□□□□ -0.21
CSDE1-210ENST00000525878 PLSCR2Q9NRY7 297 aa13.77□□□□□ -0.21
CSDE1-210ENST00000525878 STK25O00506 426 aa13.75□□□□□ -0.21
CSDE1-210ENST00000525878 NLRP6P59044 892 aa13.74□□□□□ -0.21
CSDE1-210ENST00000525878 MFRPQ9BY79 579 aa13.73□□□□□ -0.21
CSDE1-210ENST00000525878 TMEM92Q6UXU6 159 aa13.71□□□□□ -0.21
CSDE1-210ENST00000525878 CDAN1Q8IWY9 1227 aa13.71□□□□□ -0.21
CSDE1-210ENST00000525878 HOXB3P14651 431 aaPredicted RBP13.7□□□□□ -0.22
CSDE1-210ENST00000525878 MARVELD3Q96A59 401 aa13.67□□□□□ -0.22
CSDE1-210ENST00000525878 EMP3P54852 163 aa13.59□□□□□ -0.23
CSDE1-210ENST00000525878 DOK7Q18PE1 504 aa13.59□□□□□ -0.23
CSDE1-210ENST00000525878 HOXB1P14653 301 aaPredicted RBP13.57□□□□□ -0.24
CSDE1-210ENST00000525878 HS6ST3Q8IZP7 471 aa13.56□□□□□ -0.24
CSDE1-210ENST00000525878 POTEB3A0JP26 581 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms