RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 VASPP50552 380 aaPredicted RBP8.69□□□□□ -1.02
ECHDC1-218ENST00000525745 CCDC61Q9Y6R9 512 aa8.69□□□□□ -1.02
ECHDC1-218ENST00000525745 MS4A3Q96HJ5 214 aa8.67□□□□□ -1.02
ECHDC1-218ENST00000525745 NUBP1P53384 320 aa8.66□□□□□ -1.02
ECHDC1-218ENST00000525745 KLHL34Q8N239 644 aa8.65□□□□□ -1.02
ECHDC1-218ENST00000525745 FAM212AQ96EL1 285 aa8.64□□□□□ -1.03
ECHDC1-218ENST00000525745 KIF12Q96FN5 646 aa8.64□□□□□ -1.03
ECHDC1-218ENST00000525745 MAP3K13O43283 966 aa8.61□□□□□ -1.03
ECHDC1-218ENST00000525745 LHX8Q68G74 356 aa8.6□□□□□ -1.03
ECHDC1-218ENST00000525745 DCAF8Q5TAQ9 597 aa8.59□□□□□ -1.03
ECHDC1-218ENST00000525745 TRPC6Q9Y210 931 aa8.56□□□□□ -1.04
ECHDC1-218ENST00000525745 PCDHB13Q9Y5F0 798 aa8.56□□□□□ -1.04
ECHDC1-218ENST00000525745 ATMINO43313 823 aaPredicted RBP8.55□□□□□ -1.04
ECHDC1-218ENST00000525745 ASTLQ6HA08 431 aaPredicted RBP8.55□□□□□ -1.04
ECHDC1-218ENST00000525745 PELP1Q8IZL8 1130 aaKnown RBP8.55□□□□□ -1.04
ECHDC1-218ENST00000525745 IFNLR1Q8IU57 520 aaPredicted RBP8.53□□□□□ -1.04
ECHDC1-218ENST00000525745 PYGBP11216 843 aa8.52□□□□□ -1.05
ECHDC1-218ENST00000525745 BMP2KQ9NSY1 1161 aaPredicted RBP8.52□□□□□ -1.05
ECHDC1-218ENST00000525745 ATN1P54259 1190 aaPredicted RBP8.51□□□□□ -1.05
ECHDC1-218ENST00000525745 SGIP1Q9BQI5 828 aa8.51□□□□□ -1.05
ECHDC1-218ENST00000525745 TIE1P35590 1138 aa8.5□□□□□ -1.05
ECHDC1-218ENST00000525745 GSE1Q14687 1217 aa8.5□□□□□ -1.05
ECHDC1-218ENST00000525745 IFNL1Q8IU54 200 aa8.5□□□□□ -1.05
ECHDC1-218ENST00000525745 METRNQ9UJH8 293 aa8.5□□□□□ -1.05
ECHDC1-218ENST00000525745 SPOCK2Q92563 424 aa8.49□□□□□ -1.05
ECHDC1-218ENST00000525745 SLC39A7Q92504 469 aa8.48□□□□□ -1.05
ECHDC1-218ENST00000525745 TTLL13PA6NNM8 815 aa8.47□□□□□ -1.05
ECHDC1-218ENST00000525745 C7P10643 843 aa8.46□□□□□ -1.06
ECHDC1-218ENST00000525745 CIZ1Q9ULV3 898 aaPredicted RBP8.46□□□□□ -1.06
ECHDC1-218ENST00000525745 POTEB2H3BUK9 544 aa8.44□□□□□ -1.06
ECHDC1-218ENST00000525745 TMEM106CQ9BVX2 250 aa8.44□□□□□ -1.06
ECHDC1-218ENST00000525745 PCDHB8Q9UN66 801 aa8.44□□□□□ -1.06
ECHDC1-218ENST00000525745 TRIM35Q9UPQ4 493 aa8.43□□□□□ -1.06
ECHDC1-218ENST00000525745 ZNF467Q7Z7K2 595 aaPredicted RBP8.39□□□□□ -1.07
ECHDC1-218ENST00000525745 SEC24BO95487 1268 aa8.38□□□□□ -1.07
ECHDC1-218ENST00000525745 CHRM1P11229 460 aaPredicted RBP8.37□□□□□ -1.07
ECHDC1-218ENST00000525745 OTUD5Q96G74 571 aa8.37□□□□□ -1.07
ECHDC1-218ENST00000525745 POTEFA5A3E0 1075 aa8.36□□□□□ -1.07
ECHDC1-218ENST00000525745 IER5LQ5T953 404 aa8.35□□□□□ -1.07
ECHDC1-218ENST00000525745 COLQQ9Y215 455 aaPredicted RBP8.35□□□□□ -1.07
ECHDC1-218ENST00000525745 POTEJP0CG39 1038 aa8.34□□□□□ -1.07
ECHDC1-218ENST00000525745 MAMSTRQ6ZN01 415 aa8.32□□□□□ -1.08
ECHDC1-218ENST00000525745 PLCG2P16885 1265 aa8.31□□□□□ -1.08
ECHDC1-218ENST00000525745 PSEN1P49768 467 aa8.31□□□□□ -1.08
ECHDC1-218ENST00000525745 GOLGA2Q08379 1002 aa8.3□□□□□ -1.08
ECHDC1-218ENST00000525745 SCUBE2Q9NQ36 999 aa8.3□□□□□ -1.08
ECHDC1-218ENST00000525745 PDAP1Q13442 181 aaKnown RBP8.29□□□□□ -1.08
ECHDC1-218ENST00000525745 TRIM41Q8WV44 630 aa8.29□□□□□ -1.08
ECHDC1-218ENST00000525745 IRX5P78411 483 aaPredicted RBP8.27□□□□□ -1.09
ECHDC1-218ENST00000525745 MKRN3Q13064 507 aaKnown RBP8.26□□□□□ -1.09
ECHDC1-218ENST00000525745 OCEL1Q9H607 264 aa8.26□□□□□ -1.09
ECHDC1-218ENST00000525745 CABP2Q9NPB3 220 aa8.23□□□□□ -1.09
ECHDC1-218ENST00000525745 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.21□□□□□ -1.13e-7■■□□□ 13.1
ECHDC1-218ENST00000525745 RIOK3O14730 519 aaKnown RBP8.2□□□□□ -1.1
ECHDC1-218ENST00000525745 RNF25Q96BH1 459 aaPredicted RBP8.2□□□□□ -1.1
ECHDC1-218ENST00000525745 PDCD7Q8N8D1 485 aaKnown RBP8.19□□□□□ -1.1
ECHDC1-218ENST00000525745 SLAIN1Q8ND83 568 aa8.17□□□□□ -1.1
ECHDC1-218ENST00000525745 ECM2O94769 699 aaPredicted RBP8.16□□□□□ -1.1
ECHDC1-218ENST00000525745 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.15□□□□□ -1.1
ECHDC1-218ENST00000525745 VGFO15240 615 aaPredicted RBP8.15□□□□□ -1.1
ECHDC1-218ENST00000525745 FAM163AQ96GL9 167 aaPredicted RBP8.15□□□□□ -1.1
ECHDC1-218ENST00000525745 ZFP91Q96JP5 570 aaPredicted RBP8.15□□□□□ -1.1
ECHDC1-218ENST00000525745 EFCAB3Q8N7B9 438 aa8.14□□□□□ -1.11
ECHDC1-218ENST00000525745 L3MBTL3Q96JM7 780 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-218ENST00000525745 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.13□□□□□ -1.11
ECHDC1-218ENST00000525745 DPY19L2Q6NUT2 758 aa8.12□□□□□ -1.11
ECHDC1-218ENST00000525745 C3orf67Q6ZVT6 689 aa8.12□□□□□ -1.11
ECHDC1-218ENST00000525745 PKD2Q13563 968 aa8.11□□□□□ -1.11
ECHDC1-218ENST00000525745 G3V3G9 751 aa8.1□□□□□ -1.11
ECHDC1-218ENST00000525745 ILDR1Q86SU0 546 aaPredicted RBP8.1□□□□□ -1.11
ECHDC1-218ENST00000525745 TAOK2Q9UL54 1235 aa8.1□□□□□ -1.11
ECHDC1-218ENST00000525745 POTEMA6NI47 508 aa8.09□□□□□ -1.11
ECHDC1-218ENST00000525745 RGL2O15211 777 aa8.08□□□□□ -1.12
ECHDC1-218ENST00000525745 POTEGQ6S5H5 508 aa8.08□□□□□ -1.12
ECHDC1-218ENST00000525745 BCL11BQ9C0K0 894 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-218ENST00000525745 STK24Q9Y6E0 443 aa8.07□□□□□ -1.12
ECHDC1-218ENST00000525745 STK25O00506 426 aa8.06□□□□□ -1.12
ECHDC1-218ENST00000525745 LCE2DQ5TA82 110 aaPredicted RBP8.06□□□□□ -1.12
ECHDC1-218ENST00000525745 BOLA1Q9Y3E2 137 aa8.06□□□□□ -1.12
ECHDC1-218ENST00000525745 SOX12O15370 315 aa8.04□□□□□ -1.12
ECHDC1-218ENST00000525745 PHF8Q9UPP1 1060 aa8.04□□□□□ -1.12
ECHDC1-218ENST00000525745 SNPHO15079 494 aa8.01□□□□□ -1.13
ECHDC1-218ENST00000525745 ST18O60284 1047 aa8□□□□□ -1.13
ECHDC1-218ENST00000525745 MS4A4AQ96JQ5 239 aa8□□□□□ -1.13
ECHDC1-218ENST00000525745 NLRP6P59044 892 aa7.99□□□□□ -1.13
ECHDC1-218ENST00000525745 MICALL2Q8IY33 904 aa7.98□□□□□ -1.13
ECHDC1-218ENST00000525745 TMEM121BQ9BXQ6 578 aaPredicted RBP7.98□□□□□ -1.13
ECHDC1-218ENST00000525745 MFRPQ9BY79 579 aa7.96□□□□□ -1.14
ECHDC1-218ENST00000525745 FBXO22Q8NEZ5 403 aa7.95□□□□□ -1.14
ECHDC1-218ENST00000525745 PLSCR2Q9NRY7 297 aa7.95□□□□□ -1.14
ECHDC1-218ENST00000525745 MARVELD3Q96A59 401 aa7.93□□□□□ -1.14
ECHDC1-218ENST00000525745 PCDH10Q9P2E7 1040 aa7.91□□□□□ -1.14
ECHDC1-218ENST00000525745 CHGAP10645 457 aaKnown RBP7.9□□□□□ -1.14
ECHDC1-218ENST00000525745 TMEM92Q6UXU6 159 aa7.9□□□□□ -1.14
ECHDC1-218ENST00000525745 CDAN1Q8IWY9 1227 aa7.89□□□□□ -1.15
ECHDC1-218ENST00000525745 HS6ST3Q8IZP7 471 aa7.89□□□□□ -1.15
ECHDC1-218ENST00000525745 HOXB3P14651 431 aaPredicted RBP7.88□□□□□ -1.15
ECHDC1-218ENST00000525745 EMP3P54852 163 aa7.88□□□□□ -1.15
ECHDC1-218ENST00000525745 ZNF710Q8N1W2 664 aa7.88□□□□□ -1.15
ECHDC1-218ENST00000525745 DOK7Q18PE1 504 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms