RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 PLSCR2Q9NRY7 297 aa11.61□□□□□ -0.55
USP47-206ENST00000525367 DCAF8L2P0C7V8 631 aa11.59□□□□□ -0.55
USP47-206ENST00000525367 GALR2O43603 387 aaPredicted RBP11.57□□□□□ -0.56
USP47-206ENST00000525367 OTUD5Q96G74 571 aa11.56□□□□□ -0.56
USP47-206ENST00000525367 POTEB2H3BUK9 544 aa11.53□□□□□ -0.56
USP47-206ENST00000525367 ECM2O94769 699 aaPredicted RBP11.5□□□□□ -0.57
USP47-206ENST00000525367 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
USP47-206ENST00000525367 RGL2O15211 777 aa11.44□□□□□ -0.58
USP47-206ENST00000525367 CIZ1Q9ULV3 898 aaPredicted RBP11.43□□□□□ -0.58
USP47-206ENST00000525367 PAK3O75914 559 aaPredicted RBP11.42□□□□□ -0.58
USP47-206ENST00000525367 PLEKHG5O94827 1062 aa11.42□□□□□ -0.58
USP47-206ENST00000525367 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
USP47-206ENST00000525367 PLCB2Q00722 1185 aa11.41□□□□□ -0.58
USP47-206ENST00000525367 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
USP47-206ENST00000525367 POTEMA6NI47 508 aa11.4□□□□□ -0.58
USP47-206ENST00000525367 NPM1P06748 294 aaKnown RBP eCLIP11.39□□□□□ -0.59
USP47-206ENST00000525367 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
USP47-206ENST00000525367 POTEGQ6S5H5 508 aa11.36□□□□□ -0.59
USP47-206ENST00000525367 NUBP1P53384 320 aa11.34□□□□□ -0.59
USP47-206ENST00000525367 ASTLQ6HA08 431 aaPredicted RBP11.34□□□□□ -0.59
USP47-206ENST00000525367 POTEJP0CG39 1038 aa11.31□□□□□ -0.6
USP47-206ENST00000525367 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
USP47-206ENST00000525367 METRNQ9UJH8 293 aa11.3□□□□□ -0.6
USP47-206ENST00000525367 ATMINO43313 823 aaPredicted RBP11.29□□□□□ -0.6
USP47-206ENST00000525367 HAP1P54257 671 aaPredicted RBP11.29□□□□□ -0.6
USP47-206ENST00000525367 C7P10643 843 aa11.28□□□□□ -0.6
USP47-206ENST00000525367 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
USP47-206ENST00000525367 PCDH10Q9P2E7 1040 aa11.28□□□□□ -0.6
USP47-206ENST00000525367 RNF25Q96BH1 459 aaPredicted RBP11.27□□□□□ -0.61
USP47-206ENST00000525367 DCAF8Q5TAQ9 597 aa11.24□□□□□ -0.61
USP47-206ENST00000525367 BBXQ8WY36 941 aaPredicted RBP11.24□□□□□ -0.61
USP47-206ENST00000525367 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
USP47-206ENST00000525367 GSE1Q14687 1217 aa11.22□□□□□ -0.61
USP47-206ENST00000525367 LCE2DQ5TA82 110 aaPredicted RBP11.22□□□□□ -0.61
USP47-206ENST00000525367 MAMSTRQ6ZN01 415 aa11.22□□□□□ -0.61
USP47-206ENST00000525367 CHGAP10645 457 aaKnown RBP11.21□□□□□ -0.61
USP47-206ENST00000525367 PAXIP1Q6ZW49 1069 aaPredicted RBP11.2□□□□□ -0.62
USP47-206ENST00000525367 CFAP44Q96MT7 982 aa11.19□□□□□ -0.62
USP47-206ENST00000525367 TRIM41Q8WV44 630 aa11.18□□□□□ -0.62
USP47-206ENST00000525367 FAM212AQ96EL1 285 aa11.17□□□□□ -0.62
USP47-206ENST00000525367 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.17□□□□□ -0.62
USP47-206ENST00000525367 ATN1P54259 1190 aaPredicted RBP11.15□□□□□ -0.62
USP47-206ENST00000525367 CCDC61Q9Y6R9 512 aa11.15□□□□□ -0.62
USP47-206ENST00000525367 POTEFA5A3E0 1075 aa11.11□□□□□ -0.63
USP47-206ENST00000525367 KIF12Q96FN5 646 aa11.11□□□□□ -0.63
USP47-206ENST00000525367 TSPYL2Q9H2G4 693 aaPredicted RBP11.11□□□□□ -0.63
USP47-206ENST00000525367 SCUBE2Q9NQ36 999 aa11.11□□□□□ -0.63
USP47-206ENST00000525367 RIOK3O14730 519 aaKnown RBP11.1□□□□□ -0.63
USP47-206ENST00000525367 PYGBP11216 843 aa11.1□□□□□ -0.63
USP47-206ENST00000525367 HS6ST3Q8IZP7 471 aa11.1□□□□□ -0.63
USP47-206ENST00000525367 FAM163AQ96GL9 167 aaPredicted RBP11.08□□□□□ -0.64
USP47-206ENST00000525367 BMP2KQ9NSY1 1161 aaPredicted RBP11.08□□□□□ -0.64
USP47-206ENST00000525367 SPRYD3Q8NCJ5 442 aa11.06□□□□□ -0.64
USP47-206ENST00000525367 KDM2AQ9Y2K7 1162 aa11.06□□□□□ -0.64
USP47-206ENST00000525367 TSHZ2Q9NRE2 1034 aa11.05□□□□□ -0.64
USP47-206ENST00000525367 TRPC6Q9Y210 931 aa11.05□□□□□ -0.64
USP47-206ENST00000525367 NKX1-1Q15270 411 aaPredicted RBP11.04□□□□□ -0.64
USP47-206ENST00000525367 TIE1P35590 1138 aa11.03□□□□□ -0.64
USP47-206ENST00000525367 CHRM1P11229 460 aaPredicted RBP11.02□□□□□ -0.65
USP47-206ENST00000525367 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.65
USP47-206ENST00000525367 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11□□□□□ -0.65
USP47-206ENST00000525367 STK25O00506 426 aa11□□□□□ -0.65
USP47-206ENST00000525367 VGFO15240 615 aaPredicted RBP11□□□□□ -0.65
USP47-206ENST00000525367 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
USP47-206ENST00000525367 MAP3K13O43283 966 aa10.99□□□□□ -0.65
USP47-206ENST00000525367 DNAJC5Q9H3Z4 198 aa10.97□□□□□ -0.65
USP47-206ENST00000525367 COLQQ9Y215 455 aaPredicted RBP10.97□□□□□ -0.65
USP47-206ENST00000525367 TTLL13PA6NNM8 815 aa10.95□□□□□ -0.66
USP47-206ENST00000525367 BCL11BQ9C0K0 894 aaPredicted RBP10.95□□□□□ -0.66
USP47-206ENST00000525367 STK24Q9Y6E0 443 aa10.94□□□□□ -0.66
USP47-206ENST00000525367 TAOK2Q9UL54 1235 aa10.93□□□□□ -0.66
USP47-206ENST00000525367 GTPBP6O43824 516 aaPredicted RBP10.92□□□□□ -0.66
USP47-206ENST00000525367 SGIP1Q9BQI5 828 aa10.91□□□□□ -0.66
USP47-206ENST00000525367 PCDHB8Q9UN66 801 aa10.91□□□□□ -0.66
USP47-206ENST00000525367 PCDHB13Q9Y5F0 798 aa10.91□□□□□ -0.66
USP47-206ENST00000525367 IER5LQ5T953 404 aa10.9□□□□□ -0.66
USP47-206ENST00000525367 SEC24BO95487 1268 aa10.89□□□□□ -0.67
USP47-206ENST00000525367 CDAN1Q8IWY9 1227 aa10.89□□□□□ -0.67
USP47-206ENST00000525367 TRIM35Q9UPQ4 493 aa10.86□□□□□ -0.67
USP47-206ENST00000525367 ZNF467Q7Z7K2 595 aaPredicted RBP10.83□□□□□ -0.68
USP47-206ENST00000525367 BCANQ96GW7 911 aa10.83□□□□□ -0.68
USP47-206ENST00000525367 ST18O60284 1047 aa10.8□□□□□ -0.68
USP47-206ENST00000525367 PDAP1Q13442 181 aaKnown RBP10.8□□□□□ -0.68
USP47-206ENST00000525367 IFNL1Q8IU54 200 aa10.8□□□□□ -0.68
USP47-206ENST00000525367 PSEN1P49768 467 aa10.78□□□□□ -0.68
USP47-206ENST00000525367 SLAIN1Q8ND83 568 aa10.78□□□□□ -0.68
USP47-206ENST00000525367 PRKCSHP14314 528 aaPredicted RBP10.74□□□□□ -0.69
USP47-206ENST00000525367 IRX5P78411 483 aaPredicted RBP10.72□□□□□ -0.69
USP47-206ENST00000525367 TMEM106CQ9BVX2 250 aa10.72□□□□□ -0.69
USP47-206ENST00000525367 PLCG2P16885 1265 aa10.71□□□□□ -0.69
USP47-206ENST00000525367 MFRPQ9BY79 579 aa10.71□□□□□ -0.69
USP47-206ENST00000525367 CADPS2Q86UW7 1296 aa10.68□□□□□ -0.7
USP47-206ENST00000525367 TMEM121BQ9BXQ6 578 aaPredicted RBP10.68□□□□□ -0.7
USP47-206ENST00000525367 CABP2Q9NPB3 220 aa10.68□□□□□ -0.7
USP47-206ENST00000525367 MMRN1Q13201 1228 aa10.67□□□□□ -0.7
USP47-206ENST00000525367 EFCAB3Q8N7B9 438 aa10.67□□□□□ -0.7
USP47-206ENST00000525367 SPNS2Q8IVW8 549 aa10.66□□□□□ -0.7
USP47-206ENST00000525367 RYDENQ9NUL5 291 aaKnown RBP10.66□□□□□ -0.7
USP47-206ENST00000525367 PPP1R37O75864 691 aa10.64□□□□□ -0.71
USP47-206ENST00000525367 OCEL1Q9H607 264 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms