RNA–Protein interactions for RNA: ENST00000524157.2

SPIDR-226, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 267 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-226ENST00000524157 CIZ1Q9ULV3 898 aaPredicted RBP10.64□□□□□ -0.71
SPIDR-226ENST00000524157 HS6ST3Q8IZP7 471 aa10.63□□□□□ -0.71
SPIDR-226ENST00000524157 ARXQ96QS3 562 aa10.63□□□□□ -0.71
SPIDR-226ENST00000524157 CACNB1Q02641 598 aaPredicted RBP10.56□□□□□ -0.72
SPIDR-226ENST00000524157 DAXXQ9UER7 740 aaPredicted RBP10.54□□□□□ -0.72
SPIDR-226ENST00000524157 TMEM132AQ24JP5 1023 aa10.53□□□□□ -0.72
SPIDR-226ENST00000524157 RBM42Q9BTD8 480 aaKnown RBP10.48□□□□□ -0.73
SPIDR-226ENST00000524157 GSE1Q14687 1217 aa10.46□□□□□ -0.73
SPIDR-226ENST00000524157 AKT1S1Q96B36 256 aa10.43□□□□□ -0.74
SPIDR-226ENST00000524157 SPDYE1Q8NFV5 336 aaPredicted RBP10.42□□□□□ -0.74
SPIDR-226ENST00000524157 GTPBP6O43824 516 aaPredicted RBP10.41□□□□□ -0.74
SPIDR-226ENST00000524157 NKX1-1Q15270 411 aaPredicted RBP10.41□□□□□ -0.74
SPIDR-226ENST00000524157 RNF25Q96BH1 459 aaPredicted RBP10.41□□□□□ -0.74
SPIDR-226ENST00000524157 RIOK3O14730 519 aaKnown RBP10.39□□□□□ -0.75
SPIDR-226ENST00000524157 HOMEZQ8IX15 550 aa10.39□□□□□ -0.75
SPIDR-226ENST00000524157 C14orf37Q86TY3 774 aa10.37□□□□□ -0.75
SPIDR-226ENST00000524157 P3H3Q8IVL6 736 aa10.36□□□□□ -0.75
SPIDR-226ENST00000524157 RYDENQ9NUL5 291 aaKnown RBP10.36□□□□□ -0.75
SPIDR-226ENST00000524157 STK25O00506 426 aa10.33□□□□□ -0.76
SPIDR-226ENST00000524157 VGFO15240 615 aaPredicted RBP10.31□□□□□ -0.76
SPIDR-226ENST00000524157 NUBP1P53384 320 aa10.31□□□□□ -0.76
SPIDR-226ENST00000524157 PRR29P0C7W0 189 aa10.28□□□□□ -0.76
SPIDR-226ENST00000524157 CHRM1P11229 460 aaPredicted RBP10.27□□□□□ -0.77
SPIDR-226ENST00000524157 DCAF8Q5TAQ9 597 aa10.27□□□□□ -0.77
SPIDR-226ENST00000524157 FAM212AQ96EL1 285 aa10.25□□□□□ -0.77
SPIDR-226ENST00000524157 REM2Q8IYK8 340 aaPredicted RBP10.24□□□□□ -0.77
SPIDR-226ENST00000524157 SGIP1Q9BQI5 828 aa10.24□□□□□ -0.77
SPIDR-226ENST00000524157 CREBZFQ9NS37 354 aa10.24□□□□□ -0.77
SPIDR-226ENST00000524157 LMOD2Q6P5Q4 547 aa10.22□□□□□ -0.77
SPIDR-226ENST00000524157 MNX1P50219 401 aaPredicted RBP10.21□□□□□ -0.77
SPIDR-226ENST00000524157 CLEC11AQ9Y240 323 aa10.21□□□□□ -0.77
SPIDR-226ENST00000524157 STK24Q9Y6E0 443 aa10.21□□□□□ -0.77
SPIDR-226ENST00000524157 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
SPIDR-226ENST00000524157 BCL11BQ9C0K0 894 aaPredicted RBP10.19□□□□□ -0.78
SPIDR-226ENST00000524157 WDR70Q9NW82 654 aa10.19□□□□□ -0.78
SPIDR-226ENST00000524157 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.16□□□□□ -0.78
SPIDR-226ENST00000524157 ZFP91Q96JP5 570 aaPredicted RBP10.16□□□□□ -0.78
SPIDR-226ENST00000524157 KCNV2Q8TDN2 545 aa10.15□□□□□ -0.78
SPIDR-226ENST00000524157 BRPF1P55201 1214 aaPredicted RBP10.14□□□□□ -0.79
SPIDR-226ENST00000524157 RASEFQ8IZ41 740 aa10.09□□□□□ -0.79
SPIDR-226ENST00000524157 PITPNM1O00562 1244 aa10.08□□□□□ -0.8
SPIDR-226ENST00000524157 NEUROD2Q15784 382 aa10.05□□□□□ -0.8
SPIDR-226ENST00000524157 CADPS2Q86UW7 1296 aa10.03□□□□□ -0.8
SPIDR-226ENST00000524157 ZC3H15Q8WU90 426 aaKnown RBP10.03□□□□□ -0.8
SPIDR-226ENST00000524157 ARHGEF1Q92888 912 aaKnown RBP10.02□□□□□ -0.81
SPIDR-226ENST00000524157 ZNF467Q7Z7K2 595 aaPredicted RBP10.01□□□□□ -0.81
SPIDR-226ENST00000524157 SUPT5HO00267 1087 aaKnown RBP10□□□□□ -0.81
SPIDR-226ENST00000524157 PYGBP11216 843 aa10□□□□□ -0.81
SPIDR-226ENST00000524157 SLC24A3Q9HC58 644 aa9.96□□□□□ -0.82
SPIDR-226ENST00000524157 FARP1Q9Y4F1 1045 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-226ENST00000524157 TESPA1A2RU30 521 aaPredicted RBP9.93□□□□□ -0.82
SPIDR-226ENST00000524157 E2F4Q16254 413 aa9.93□□□□□ -0.82
SPIDR-226ENST00000524157 PDAP1Q13442 181 aaKnown RBP9.92□□□□□ -0.82
SPIDR-226ENST00000524157 SMYD5Q6GMV2 418 aa9.9□□□□□ -0.82
SPIDR-226ENST00000524157 ZNF579Q8NAF0 562 aaKnown RBP9.89□□□□□ -0.83
SPIDR-226ENST00000524157 SEMA3EO15041 775 aa9.88□□□□□ -0.83
SPIDR-226ENST00000524157 ZMYND10O75800 440 aa9.88□□□□□ -0.83
SPIDR-226ENST00000524157 PODXL2Q9NZ53 605 aa9.88□□□□□ -0.83
SPIDR-226ENST00000524157 FXR2P51116 673 aaKnown RBP eCLIP9.87□□□□□ -0.83
SPIDR-226ENST00000524157 TSPYL2Q9H2G4 693 aaPredicted RBP9.87□□□□□ -0.83
SPIDR-226ENST00000524157 PAK3O75914 559 aaPredicted RBP9.86□□□□□ -0.83
SPIDR-226ENST00000524157 CHADLQ6NUI6 762 aa9.86□□□□□ -0.83
SPIDR-226ENST00000524157 MFRPQ9BY79 579 aa9.86□□□□□ -0.83
SPIDR-226ENST00000524157 CCDC61Q9Y6R9 512 aa9.86□□□□□ -0.83
SPIDR-226ENST00000524157 RANGAP1P46060 587 aaPredicted RBP9.85□□□□□ -0.83
SPIDR-226ENST00000524157 PRKAR2AP13861 404 aaKnown RBP9.84□□□□□ -0.83
SPIDR-226ENST00000524157 PSEN1P49768 467 aa9.81□□□□□ -0.84
SPIDR-226ENST00000524157 BARGINQ6ZT62 677 aa9.8□□□□□ -0.84
SPIDR-226ENST00000524157 ZMYND15Q9H091 742 aa9.79□□□□□ -0.84
SPIDR-226ENST00000524157 RSPH6AQ9H0K4 717 aa9.78□□□□□ -0.84
SPIDR-226ENST00000524157 SOX12O15370 315 aa9.77□□□□□ -0.85
SPIDR-226ENST00000524157 UBTFP17480 764 aaKnown RBP9.77□□□□□ -0.85
SPIDR-226ENST00000524157 NLRP6P59044 892 aa9.77□□□□□ -0.85
SPIDR-226ENST00000524157 AK7Q96M32 723 aa9.77□□□□□ -0.85
SPIDR-226ENST00000524157 PCDHB8Q9UN66 801 aa9.77□□□□□ -0.85
SPIDR-226ENST00000524157 PCDHB13Q9Y5F0 798 aa9.77□□□□□ -0.85
SPIDR-226ENST00000524157 ARIH1Q9Y4X5 557 aaPredicted RBP9.76□□□□□ -0.85
SPIDR-226ENST00000524157 PPP1R37O75864 691 aa9.75□□□□□ -0.85
SPIDR-226ENST00000524157 FBXO22Q8NEZ5 403 aa9.73□□□□□ -0.85
SPIDR-226ENST00000524157 KIF12Q96FN5 646 aa9.73□□□□□ -0.85
SPIDR-226ENST00000524157 PDE4AP27815 886 aa9.72□□□□□ -0.85
SPIDR-226ENST00000524157 CHRDL2Q6WN34 429 aa9.72□□□□□ -0.85
SPIDR-226ENST00000524157 MFSD10Q14728 455 aa9.7□□□□□ -0.86
SPIDR-226ENST00000524157 IFNL1Q8IU54 200 aa9.7□□□□□ -0.86
SPIDR-226ENST00000524157 GPIHBP1Q8IV16 184 aa9.7□□□□□ -0.86
SPIDR-226ENST00000524157 LARP6Q9BRS8 491 aaKnown RBP9.7□□□□□ -0.86
SPIDR-226ENST00000524157 GPBP1L1Q9HC44 474 aaPredicted RBP9.7□□□□□ -0.86
SPIDR-226ENST00000524157 MAP3K13O43283 966 aa9.69□□□□□ -0.86
SPIDR-226ENST00000524157 PIP4P2Q8N4L2 257 aa9.69□□□□□ -0.86
SPIDR-226ENST00000524157 KRI1Q8N9T8 703 aaKnown RBP9.69□□□□□ -0.86
SPIDR-226ENST00000524157 IL27Q8NEV9 243 aa9.69□□□□□ -0.86
SPIDR-226ENST00000524157 KDM4CQ9H3R0 1056 aa9.69□□□□□ -0.86
SPIDR-226ENST00000524157 NCKAP5LQ9HCH0 1330 aa9.69□□□□□ -0.86
SPIDR-226ENST00000524157 EFCAB3Q8N7B9 438 aa9.67□□□□□ -0.86
SPIDR-226ENST00000524157 DDX27Q96GQ7 796 aaKnown RBP9.67□□□□□ -0.86
SPIDR-226ENST00000524157 TRIM26Q12899 539 aaPredicted RBP9.66□□□□□ -0.86
SPIDR-226ENST00000524157 PHF8Q9UPP1 1060 aa9.66□□□□□ -0.86
SPIDR-226ENST00000524157 CAMK2BQ13554 666 aa9.64□□□□□ -0.87
SPIDR-226ENST00000524157 CRISPLD2Q9H0B8 497 aa9.64□□□□□ -0.87
SPIDR-226ENST00000524157 CABP2Q9NPB3 220 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms