RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 DCBLD2Q96PD2 775 aa14.48□□□□□ -0.09
EFCAB13-213ENST00000523978 NUBP1P53384 320 aa14.43□□□□□ -0.1
EFCAB13-213ENST00000523978 MS4A3Q96HJ5 214 aa14.43□□□□□ -0.1
EFCAB13-213ENST00000523978 VASPP50552 380 aaPredicted RBP14.41□□□□□ -0.1
EFCAB13-213ENST00000523978 KIF12Q96FN5 646 aa14.37□□□□□ -0.11
EFCAB13-213ENST00000523978 MAP3K13O43283 966 aa14.31□□□□□ -0.12
EFCAB13-213ENST00000523978 FAM212AQ96EL1 285 aa14.31□□□□□ -0.12
EFCAB13-213ENST00000523978 LHX8Q68G74 356 aa14.3□□□□□ -0.12
EFCAB13-213ENST00000523978 KLHL34Q8N239 644 aa14.28□□□□□ -0.12
EFCAB13-213ENST00000523978 ASTLQ6HA08 431 aaPredicted RBP14.25□□□□□ -0.13
EFCAB13-213ENST00000523978 PELP1Q8IZL8 1130 aaKnown RBP14.25□□□□□ -0.13
EFCAB13-213ENST00000523978 TRPC6Q9Y210 931 aa14.24□□□□□ -0.13
EFCAB13-213ENST00000523978 ATMINO43313 823 aaPredicted RBP14.23□□□□□ -0.13
EFCAB13-213ENST00000523978 DCAF8Q5TAQ9 597 aa14.21□□□□□ -0.13
EFCAB13-213ENST00000523978 PCDHB13Q9Y5F0 798 aa14.19□□□□□ -0.14
EFCAB13-213ENST00000523978 IFNLR1Q8IU57 520 aaPredicted RBP14.18□□□□□ -0.14
EFCAB13-213ENST00000523978 BMP2KQ9NSY1 1161 aaPredicted RBP14.17□□□□□ -0.14
EFCAB13-213ENST00000523978 ATN1P54259 1190 aaPredicted RBP14.16□□□□□ -0.14
EFCAB13-213ENST00000523978 SGIP1Q9BQI5 828 aa14.16□□□□□ -0.14
EFCAB13-213ENST00000523978 PYGBP11216 843 aa14.13□□□□□ -0.15
EFCAB13-213ENST00000523978 TIE1P35590 1138 aa14.13□□□□□ -0.15
EFCAB13-213ENST00000523978 IFNL1Q8IU54 200 aa14.13□□□□□ -0.15
EFCAB13-213ENST00000523978 METRNQ9UJH8 293 aa14.12□□□□□ -0.15
EFCAB13-213ENST00000523978 SLC39A7Q92504 469 aa14.11□□□□□ -0.15
EFCAB13-213ENST00000523978 GSE1Q14687 1217 aa14.09□□□□□ -0.15
EFCAB13-213ENST00000523978 SPOCK2Q92563 424 aa14.09□□□□□ -0.15
EFCAB13-213ENST00000523978 TTLL13PA6NNM8 815 aa14.08□□□□□ -0.16
EFCAB13-213ENST00000523978 POTEB2H3BUK9 544 aa14.08□□□□□ -0.16
EFCAB13-213ENST00000523978 C7P10643 843 aa14.07□□□□□ -0.16
EFCAB13-213ENST00000523978 PCDHB8Q9UN66 801 aa14.01□□□□□ -0.17
EFCAB13-213ENST00000523978 TMEM106CQ9BVX2 250 aa13.99□□□□□ -0.17
EFCAB13-213ENST00000523978 TRIM35Q9UPQ4 493 aa13.99□□□□□ -0.17
EFCAB13-213ENST00000523978 CIZ1Q9ULV3 898 aaPredicted RBP13.98□□□□□ -0.17
EFCAB13-213ENST00000523978 POTEFA5A3E0 1075 aa13.96□□□□□ -0.17
EFCAB13-213ENST00000523978 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
EFCAB13-213ENST00000523978 CHRM1P11229 460 aaPredicted RBP13.95□□□□□ -0.18
EFCAB13-213ENST00000523978 POTEJP0CG39 1038 aa13.93□□□□□ -0.18
EFCAB13-213ENST00000523978 ZNF467Q7Z7K2 595 aaPredicted RBP13.91□□□□□ -0.18
EFCAB13-213ENST00000523978 COLQQ9Y215 455 aaPredicted RBP13.91□□□□□ -0.18
EFCAB13-213ENST00000523978 IER5LQ5T953 404 aa13.89□□□□□ -0.19
EFCAB13-213ENST00000523978 SEC24BO95487 1268 aa13.87□□□□□ -0.19
EFCAB13-213ENST00000523978 PSEN1P49768 467 aa13.8□□□□□ -0.2
EFCAB13-213ENST00000523978 MAMSTRQ6ZN01 415 aa13.79□□□□□ -0.2
EFCAB13-213ENST00000523978 IRX5P78411 483 aaPredicted RBP13.78□□□□□ -0.2
EFCAB13-213ENST00000523978 PLCG2P16885 1265 aa13.76□□□□□ -0.21
EFCAB13-213ENST00000523978 PDAP1Q13442 181 aaKnown RBP13.76□□□□□ -0.21
EFCAB13-213ENST00000523978 TRIM41Q8WV44 630 aa13.76□□□□□ -0.21
EFCAB13-213ENST00000523978 SCUBE2Q9NQ36 999 aa13.75□□□□□ -0.21
EFCAB13-213ENST00000523978 GOLGA2Q08379 1002 aa13.7□□□□□ -0.22
EFCAB13-213ENST00000523978 OCEL1Q9H607 264 aa13.7□□□□□ -0.22
EFCAB13-213ENST00000523978 MKRN3Q13064 507 aaKnown RBP13.68□□□□□ -0.22
EFCAB13-213ENST00000523978 RNF25Q96BH1 459 aaPredicted RBP13.65□□□□□ -0.22
EFCAB13-213ENST00000523978 PDCD7Q8N8D1 485 aaKnown RBP13.64□□□□□ -0.23
EFCAB13-213ENST00000523978 CABP2Q9NPB3 220 aa13.64□□□□□ -0.23
EFCAB13-213ENST00000523978 RIOK3O14730 519 aaKnown RBP13.6□□□□□ -0.23
EFCAB13-213ENST00000523978 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.6□□□□□ -0.23
EFCAB13-213ENST00000523978 ILDR1Q86SU0 546 aaPredicted RBP13.54□□□□□ -0.24
EFCAB13-213ENST00000523978 SLAIN1Q8ND83 568 aa13.54□□□□□ -0.24
EFCAB13-213ENST00000523978 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.52□□□□□ -0.25
EFCAB13-213ENST00000523978 VGFO15240 615 aaPredicted RBP13.52□□□□□ -0.25
EFCAB13-213ENST00000523978 ZFP91Q96JP5 570 aaPredicted RBP13.52□□□□□ -0.25
EFCAB13-213ENST00000523978 PKD2Q13563 968 aa13.5□□□□□ -0.25
EFCAB13-213ENST00000523978 LCE2DQ5TA82 110 aaPredicted RBP13.5□□□□□ -0.25
EFCAB13-213ENST00000523978 DPY19L2Q6NUT2 758 aa13.5□□□□□ -0.25
EFCAB13-213ENST00000523978 EFCAB3Q8N7B9 438 aa13.5□□□□□ -0.25
EFCAB13-213ENST00000523978 ECM2O94769 699 aaPredicted RBP13.49□□□□□ -0.25
EFCAB13-213ENST00000523978 FAM163AQ96GL9 167 aaPredicted RBP13.48□□□□□ -0.25
EFCAB13-213ENST00000523978 L3MBTL3Q96JM7 780 aaPredicted RBP13.48□□□□□ -0.25
EFCAB13-213ENST00000523978 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.47□□□□□ -0.25
EFCAB13-213ENST00000523978 POTEMA6NI47 508 aa13.46□□□□□ -0.25
EFCAB13-213ENST00000523978 POTEGQ6S5H5 508 aa13.44□□□□□ -0.26
EFCAB13-213ENST00000523978 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
EFCAB13-213ENST00000523978 RGL2O15211 777 aa13.41□□□□□ -0.26
EFCAB13-213ENST00000523978 BCL11BQ9C0K0 894 aaPredicted RBP13.4□□□□□ -0.26
EFCAB13-213ENST00000523978 TAOK2Q9UL54 1235 aa13.39□□□□□ -0.27
EFCAB13-213ENST00000523978 BOLA1Q9Y3E2 137 aa13.38□□□□□ -0.27
EFCAB13-213ENST00000523978 SOX12O15370 315 aa13.36□□□□□ -0.27
EFCAB13-213ENST00000523978 G3V3G9 751 aa13.35□□□□□ -0.27
EFCAB13-213ENST00000523978 PHF8Q9UPP1 1060 aa13.35□□□□□ -0.27
EFCAB13-213ENST00000523978 STK24Q9Y6E0 443 aa13.35□□□□□ -0.27
EFCAB13-213ENST00000523978 STK25O00506 426 aa13.33□□□□□ -0.28
EFCAB13-213ENST00000523978 MS4A4AQ96JQ5 239 aa13.33□□□□□ -0.28
EFCAB13-213ENST00000523978 ST18O60284 1047 aa13.32□□□□□ -0.28
EFCAB13-213ENST00000523978 TMEM121BQ9BXQ6 578 aaPredicted RBP13.29□□□□□ -0.28
EFCAB13-213ENST00000523978 SNPHO15079 494 aa13.28□□□□□ -0.28
EFCAB13-213ENST00000523978 MICALL2Q8IY33 904 aa13.26□□□□□ -0.29
EFCAB13-213ENST00000523978 FBXO22Q8NEZ5 403 aa13.25□□□□□ -0.29
EFCAB13-213ENST00000523978 NLRP6P59044 892 aa13.24□□□□□ -0.29
EFCAB13-213ENST00000523978 MFRPQ9BY79 579 aa13.24□□□□□ -0.29
EFCAB13-213ENST00000523978 TMEM92Q6UXU6 159 aa13.18□□□□□ -0.3
EFCAB13-213ENST00000523978 PCDH10Q9P2E7 1040 aa13.17□□□□□ -0.3
EFCAB13-213ENST00000523978 PLSCR2Q9NRY7 297 aa13.16□□□□□ -0.3
EFCAB13-213ENST00000523978 MARVELD3Q96A59 401 aa13.15□□□□□ -0.3
EFCAB13-213ENST00000523978 HOXB3P14651 431 aaPredicted RBP13.13□□□□□ -0.31
EFCAB13-213ENST00000523978 HS6ST3Q8IZP7 471 aa13.11□□□□□ -0.31
EFCAB13-213ENST00000523978 CDAN1Q8IWY9 1227 aa13.1□□□□□ -0.31
EFCAB13-213ENST00000523978 CHGAP10645 457 aaKnown RBP13.07□□□□□ -0.32
EFCAB13-213ENST00000523978 EMP3P54852 163 aa13.06□□□□□ -0.32
EFCAB13-213ENST00000523978 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
EFCAB13-213ENST00000523978 PPP1R37O75864 691 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms