RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 DCBLD2Q96PD2 775 aa10.76□□□□□ -0.69
PCM1-220ENST00000523896 NUBP1P53384 320 aa10.73□□□□□ -0.69
PCM1-220ENST00000523896 CCDC61Q9Y6R9 512 aa10.72□□□□□ -0.69
PCM1-220ENST00000523896 GALR2O43603 387 aaPredicted RBP10.7□□□□□ -0.7
PCM1-220ENST00000523896 DCAF8Q5TAQ9 597 aa10.7□□□□□ -0.7
PCM1-220ENST00000523896 MS4A3Q96HJ5 214 aa10.66□□□□□ -0.7
PCM1-220ENST00000523896 GSE1Q14687 1217 aa10.65□□□□□ -0.7
PCM1-220ENST00000523896 SPOCK2Q92563 424 aa10.65□□□□□ -0.7
PCM1-220ENST00000523896 KIF12Q96FN5 646 aa10.65□□□□□ -0.7
PCM1-220ENST00000523896 IFNLR1Q8IU57 520 aaPredicted RBP10.62□□□□□ -0.71
PCM1-220ENST00000523896 MAP3K13O43283 966 aa10.61□□□□□ -0.71
PCM1-220ENST00000523896 PCDHB13Q9Y5F0 798 aa10.6□□□□□ -0.71
PCM1-220ENST00000523896 SGIP1Q9BQI5 828 aa10.59□□□□□ -0.71
PCM1-220ENST00000523896 CIZ1Q9ULV3 898 aaPredicted RBP10.57□□□□□ -0.72
PCM1-220ENST00000523896 POTEIP0CG38 1075 aa10.56□□□□□ -0.72
PCM1-220ENST00000523896 PYGBP11216 843 aa10.55□□□□□ -0.72
PCM1-220ENST00000523896 LHX8Q68G74 356 aa10.54□□□□□ -0.72
PCM1-220ENST00000523896 TIE1P35590 1138 aa10.52□□□□□ -0.73
PCM1-220ENST00000523896 ASTLQ6HA08 431 aaPredicted RBP10.5□□□□□ -0.73
PCM1-220ENST00000523896 ATMINO43313 823 aaPredicted RBP10.49□□□□□ -0.73
PCM1-220ENST00000523896 IFNL1Q8IU54 200 aa10.49□□□□□ -0.73
PCM1-220ENST00000523896 ZNF467Q7Z7K2 595 aaPredicted RBP10.48□□□□□ -0.73
PCM1-220ENST00000523896 SLC39A7Q92504 469 aa10.47□□□□□ -0.73
PCM1-220ENST00000523896 BMP2KQ9NSY1 1161 aaPredicted RBP10.47□□□□□ -0.73
PCM1-220ENST00000523896 AMER1Q5JTC6 1135 aaPredicted RBP10.46□□□□□ -0.73
PCM1-220ENST00000523896 TRIM41Q8WV44 630 aa10.46□□□□□ -0.73
PCM1-220ENST00000523896 TRPC6Q9Y210 931 aa10.45□□□□□ -0.74
PCM1-220ENST00000523896 C7P10643 843 aa10.44□□□□□ -0.74
PCM1-220ENST00000523896 CHRM1P11229 460 aaPredicted RBP10.44□□□□□ -0.74
PCM1-220ENST00000523896 ATN1P54259 1190 aaPredicted RBP10.44□□□□□ -0.74
PCM1-220ENST00000523896 PLSCR2Q9NRY7 297 aa10.44□□□□□ -0.74
PCM1-220ENST00000523896 TTLL13PA6NNM8 815 aa10.43□□□□□ -0.74
PCM1-220ENST00000523896 TMEM106CQ9BVX2 250 aa10.43□□□□□ -0.74
PCM1-220ENST00000523896 METRNQ9UJH8 293 aa10.43□□□□□ -0.74
PCM1-220ENST00000523896 PCDHB8Q9UN66 801 aa10.42□□□□□ -0.74
PCM1-220ENST00000523896 PELP1Q8IZL8 1130 aaKnown RBP10.41□□□□□ -0.74
PCM1-220ENST00000523896 RTN4Q9NQC3 1192 aaKnown RBP10.41□□□□□ -0.74
PCM1-220ENST00000523896 TRIM35Q9UPQ4 493 aa10.39□□□□□ -0.75
PCM1-220ENST00000523896 SEC24BO95487 1268 aa10.37□□□□□ -0.75
PCM1-220ENST00000523896 GOLGA2Q08379 1002 aa10.37□□□□□ -0.75
PCM1-220ENST00000523896 IER5LQ5T953 404 aa10.35□□□□□ -0.75
PCM1-220ENST00000523896 PDAP1Q13442 181 aaKnown RBP10.34□□□□□ -0.75
PCM1-220ENST00000523896 PSEN1P49768 467 aa10.33□□□□□ -0.76
PCM1-220ENST00000523896 PLCG2P16885 1265 aa10.29□□□□□ -0.76
PCM1-220ENST00000523896 MKRN3Q13064 507 aaKnown RBP10.28□□□□□ -0.76
PCM1-220ENST00000523896 MAMSTRQ6ZN01 415 aa10.28□□□□□ -0.76
PCM1-220ENST00000523896 TAOK2Q9UL54 1235 aa10.28□□□□□ -0.76
PCM1-220ENST00000523896 RIOK3O14730 519 aaKnown RBP10.25□□□□□ -0.77
PCM1-220ENST00000523896 ECM2O94769 699 aaPredicted RBP10.25□□□□□ -0.77
PCM1-220ENST00000523896 SCUBE2Q9NQ36 999 aa10.24□□□□□ -0.77
PCM1-220ENST00000523896 POTEB2H3BUK9 544 aa10.22□□□□□ -0.77
PCM1-220ENST00000523896 VGFO15240 615 aaPredicted RBP10.22□□□□□ -0.77
PCM1-220ENST00000523896 OCEL1Q9H607 264 aa10.21□□□□□ -0.77
PCM1-220ENST00000523896 CABP2Q9NPB3 220 aa10.21□□□□□ -0.77
PCM1-220ENST00000523896 COLQQ9Y215 455 aaPredicted RBP10.21□□□□□ -0.77
PCM1-220ENST00000523896 IRX5P78411 483 aaPredicted RBP10.19□□□□□ -0.78
PCM1-220ENST00000523896 POTEFA5A3E0 1075 aa10.18□□□□□ -0.78
PCM1-220ENST00000523896 OTUD5Q96G74 571 aa10.17□□□□□ -0.78
PCM1-220ENST00000523896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.17□□□□□ -0.782e-17■■■■■ 38.1
PCM1-220ENST00000523896 RNF25Q96BH1 459 aaPredicted RBP10.15□□□□□ -0.78
PCM1-220ENST00000523896 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.14□□□□□ -0.79
PCM1-220ENST00000523896 ZFP91Q96JP5 570 aaPredicted RBP10.14□□□□□ -0.79
PCM1-220ENST00000523896 G3V3G9 751 aa10.13□□□□□ -0.79
PCM1-220ENST00000523896 PKD2Q13563 968 aa10.13□□□□□ -0.79
PCM1-220ENST00000523896 L3MBTL3Q96JM7 780 aaPredicted RBP10.12□□□□□ -0.79
PCM1-220ENST00000523896 POTEJP0CG39 1038 aa10.1□□□□□ -0.79
PCM1-220ENST00000523896 STK25O00506 426 aa10.08□□□□□ -0.8
PCM1-220ENST00000523896 EFCAB3Q8N7B9 438 aa10.08□□□□□ -0.8
PCM1-220ENST00000523896 BCL11BQ9C0K0 894 aaPredicted RBP10.08□□□□□ -0.8
PCM1-220ENST00000523896 STK24Q9Y6E0 443 aa10.08□□□□□ -0.8
PCM1-220ENST00000523896 RGL2O15211 777 aa10.07□□□□□ -0.8
PCM1-220ENST00000523896 C3orf67Q6ZVT6 689 aa10.07□□□□□ -0.8
PCM1-220ENST00000523896 PDCD7Q8N8D1 485 aaKnown RBP10.07□□□□□ -0.8
PCM1-220ENST00000523896 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.07□□□□□ -0.8
PCM1-220ENST00000523896 SOX12O15370 315 aa10.05□□□□□ -0.8
PCM1-220ENST00000523896 SLAIN1Q8ND83 568 aa10.05□□□□□ -0.8
PCM1-220ENST00000523896 ILDR1Q86SU0 546 aaPredicted RBP10□□□□□ -0.81
PCM1-220ENST00000523896 NLRP6P59044 892 aa9.99□□□□□ -0.81
PCM1-220ENST00000523896 BOLA1Q9Y3E2 137 aa9.99□□□□□ -0.81
PCM1-220ENST00000523896 POTEMA6NI47 508 aa9.97□□□□□ -0.81
PCM1-220ENST00000523896 DPY19L2Q6NUT2 758 aa9.97□□□□□ -0.81
PCM1-220ENST00000523896 PHF8Q9UPP1 1060 aa9.97□□□□□ -0.81
PCM1-220ENST00000523896 SNPHO15079 494 aa9.95□□□□□ -0.82
PCM1-220ENST00000523896 FAM163AQ96GL9 167 aaPredicted RBP9.94□□□□□ -0.82
PCM1-220ENST00000523896 DCAF8L2P0C7V8 631 aa9.93□□□□□ -0.82
PCM1-220ENST00000523896 POTEGQ6S5H5 508 aa9.93□□□□□ -0.82
PCM1-220ENST00000523896 CHGAP10645 457 aaKnown RBP9.92□□□□□ -0.82
PCM1-220ENST00000523896 HS6ST3Q8IZP7 471 aa9.9□□□□□ -0.82
PCM1-220ENST00000523896 MICALL2Q8IY33 904 aa9.88□□□□□ -0.83
PCM1-220ENST00000523896 MS4A4AQ96JQ5 239 aa9.88□□□□□ -0.83
PCM1-220ENST00000523896 MFRPQ9BY79 579 aa9.88□□□□□ -0.83
PCM1-220ENST00000523896 FBXO22Q8NEZ5 403 aa9.86□□□□□ -0.83
PCM1-220ENST00000523896 TMEM121BQ9BXQ6 578 aaPredicted RBP9.85□□□□□ -0.83
PCM1-220ENST00000523896 RYDENQ9NUL5 291 aaKnown RBP9.84□□□□□ -0.83
PCM1-220ENST00000523896 SLC24A1O60721 1099 aa9.81□□□□□ -0.84
PCM1-220ENST00000523896 ST18O60284 1047 aa9.78□□□□□ -0.84
PCM1-220ENST00000523896 ZNF710Q8N1W2 664 aa9.78□□□□□ -0.84
PCM1-220ENST00000523896 RIMBP2O15034 1052 aa9.77□□□□□ -0.85
PCM1-220ENST00000523896 DOK7Q18PE1 504 aa9.77□□□□□ -0.85
PCM1-220ENST00000523896 DNAJC5Q9H3Z4 198 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms