RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 PLSCR2Q9NRY7 297 aa11.24□□□□□ -0.61
HDAC2-216ENST00000523628 RASEFQ8IZ41 740 aa11.21□□□□□ -0.61
HDAC2-216ENST00000523628 ZBTB47Q9UFB7 747 aaPredicted RBP11.2□□□□□ -0.62
HDAC2-216ENST00000523628 KIF12Q96FN5 646 aa11.19□□□□□ -0.62
HDAC2-216ENST00000523628 ASTLQ6HA08 431 aaPredicted RBP11.18□□□□□ -0.62
HDAC2-216ENST00000523628 PELP1Q8IZL8 1130 aaKnown RBP11.17□□□□□ -0.62
HDAC2-216ENST00000523628 ATMINO43313 823 aaPredicted RBP11.15□□□□□ -0.62
HDAC2-216ENST00000523628 NUBP1P53384 320 aa11.13□□□□□ -0.63
HDAC2-216ENST00000523628 FBXO3Q9UK99 471 aa11.13□□□□□ -0.63
HDAC2-216ENST00000523628 MAP3K13O43283 966 aa11.12□□□□□ -0.63
HDAC2-216ENST00000523628 POTEB2H3BUK9 544 aa11.1□□□□□ -0.63
HDAC2-216ENST00000523628 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
HDAC2-216ENST00000523628 C7P10643 843 aa11.08□□□□□ -0.64
HDAC2-216ENST00000523628 METRNQ9UJH8 293 aa11.08□□□□□ -0.64
HDAC2-216ENST00000523628 ATN1P54259 1190 aaPredicted RBP11.07□□□□□ -0.64
HDAC2-216ENST00000523628 TRPC6Q9Y210 931 aa11.07□□□□□ -0.64
HDAC2-216ENST00000523628 TIE1P35590 1138 aa11.05□□□□□ -0.64
HDAC2-216ENST00000523628 FAM212AQ96EL1 285 aa11.05□□□□□ -0.64
HDAC2-216ENST00000523628 OTUD5Q96G74 571 aa11.05□□□□□ -0.64
HDAC2-216ENST00000523628 SGIP1Q9BQI5 828 aa11.05□□□□□ -0.64
HDAC2-216ENST00000523628 BMP2KQ9NSY1 1161 aaPredicted RBP11.05□□□□□ -0.64
HDAC2-216ENST00000523628 PCDHB13Q9Y5F0 798 aa11.01□□□□□ -0.65
HDAC2-216ENST00000523628 VASPP50552 380 aaPredicted RBP10.98□□□□□ -0.65
HDAC2-216ENST00000523628 TTLL13PA6NNM8 815 aa10.97□□□□□ -0.65
HDAC2-216ENST00000523628 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
HDAC2-216ENST00000523628 IFNL1Q8IU54 200 aa10.95□□□□□ -0.66
HDAC2-216ENST00000523628 POTEJP0CG39 1038 aa10.94□□□□□ -0.66
HDAC2-216ENST00000523628 POTEFA5A3E0 1075 aa10.93□□□□□ -0.66
HDAC2-216ENST00000523628 KLHL34Q8N239 644 aa10.93□□□□□ -0.66
HDAC2-216ENST00000523628 MAMSTRQ6ZN01 415 aa10.91□□□□□ -0.66
HDAC2-216ENST00000523628 TRIM35Q9UPQ4 493 aa10.91□□□□□ -0.66
HDAC2-216ENST00000523628 PYGBP11216 843 aa10.89□□□□□ -0.67
HDAC2-216ENST00000523628 IER5LQ5T953 404 aa10.87□□□□□ -0.67
HDAC2-216ENST00000523628 TMEM106CQ9BVX2 250 aa10.87□□□□□ -0.67
HDAC2-216ENST00000523628 SEC24BO95487 1268 aa10.86□□□□□ -0.67
HDAC2-216ENST00000523628 GSE1Q14687 1217 aa10.86□□□□□ -0.67
HDAC2-216ENST00000523628 SCUBE2Q9NQ36 999 aa10.85□□□□□ -0.67
HDAC2-216ENST00000523628 COLQQ9Y215 455 aaPredicted RBP10.85□□□□□ -0.67
HDAC2-216ENST00000523628 PCDHB8Q9UN66 801 aa10.8□□□□□ -0.68
HDAC2-216ENST00000523628 IFNLR1Q8IU57 520 aaPredicted RBP10.79□□□□□ -0.68
HDAC2-216ENST00000523628 CHRM1P11229 460 aaPredicted RBP10.77□□□□□ -0.69
HDAC2-216ENST00000523628 ZNF467Q7Z7K2 595 aaPredicted RBP10.76□□□□□ -0.69
HDAC2-216ENST00000523628 SPOCK2Q92563 424 aa10.76□□□□□ -0.69
HDAC2-216ENST00000523628 PLCG2P16885 1265 aa10.75□□□□□ -0.69
HDAC2-216ENST00000523628 IRX5P78411 483 aaPredicted RBP10.75□□□□□ -0.69
HDAC2-216ENST00000523628 POTEMA6NI47 508 aa10.73□□□□□ -0.69
HDAC2-216ENST00000523628 POTEGQ6S5H5 508 aa10.7□□□□□ -0.7
HDAC2-216ENST00000523628 OCEL1Q9H607 264 aa10.7□□□□□ -0.7
HDAC2-216ENST00000523628 CIZ1Q9ULV3 898 aaPredicted RBP10.69□□□□□ -0.7
HDAC2-216ENST00000523628 FAM163AQ96GL9 167 aaPredicted RBP10.68□□□□□ -0.7
HDAC2-216ENST00000523628 LCE2DQ5TA82 110 aaPredicted RBP10.66□□□□□ -0.7
HDAC2-216ENST00000523628 PSEN1P49768 467 aa10.65□□□□□ -0.7
HDAC2-216ENST00000523628 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
HDAC2-216ENST00000523628 MKRN3Q13064 507 aaKnown RBP10.63□□□□□ -0.71
HDAC2-216ENST00000523628 SLAIN1Q8ND83 568 aa10.63□□□□□ -0.71
HDAC2-216ENST00000523628 PDAP1Q13442 181 aaKnown RBP10.62□□□□□ -0.71
HDAC2-216ENST00000523628 PDCD7Q8N8D1 485 aaKnown RBP10.59□□□□□ -0.71
HDAC2-216ENST00000523628 PCDH10Q9P2E7 1040 aa10.58□□□□□ -0.72
HDAC2-216ENST00000523628 TRIM41Q8WV44 630 aa10.57□□□□□ -0.72
HDAC2-216ENST00000523628 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.55□□□□□ -0.726e-7■■■□□ 18.9
HDAC2-216ENST00000523628 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.55□□□□□ -0.72
HDAC2-216ENST00000523628 L3MBTL3Q96JM7 780 aaPredicted RBP10.54□□□□□ -0.72
HDAC2-216ENST00000523628 CABP2Q9NPB3 220 aa10.52□□□□□ -0.73
HDAC2-216ENST00000523628 ILDR1Q86SU0 546 aaPredicted RBP10.51□□□□□ -0.73
HDAC2-216ENST00000523628 ST18O60284 1047 aa10.49□□□□□ -0.73
HDAC2-216ENST00000523628 C3orf67Q6ZVT6 689 aa10.48□□□□□ -0.73
HDAC2-216ENST00000523628 SNPHO15079 494 aa10.46□□□□□ -0.73
HDAC2-216ENST00000523628 DPY19L2Q6NUT2 758 aa10.44□□□□□ -0.74
HDAC2-216ENST00000523628 RIOK3O14730 519 aaKnown RBP10.41□□□□□ -0.74
HDAC2-216ENST00000523628 CDAN1Q8IWY9 1227 aa10.4□□□□□ -0.74
HDAC2-216ENST00000523628 EFCAB3Q8N7B9 438 aa10.4□□□□□ -0.74
HDAC2-216ENST00000523628 RNF25Q96BH1 459 aaPredicted RBP10.4□□□□□ -0.74
HDAC2-216ENST00000523628 TMEM121BQ9BXQ6 578 aaPredicted RBP10.4□□□□□ -0.74
HDAC2-216ENST00000523628 BOLA1Q9Y3E2 137 aa10.4□□□□□ -0.74
HDAC2-216ENST00000523628 G3V3G9 751 aa10.38□□□□□ -0.75
HDAC2-216ENST00000523628 VGFO15240 615 aaPredicted RBP10.36□□□□□ -0.75
HDAC2-216ENST00000523628 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.35□□□□□ -0.75
HDAC2-216ENST00000523628 ZFP91Q96JP5 570 aaPredicted RBP10.35□□□□□ -0.75
HDAC2-216ENST00000523628 SOX12O15370 315 aa10.33□□□□□ -0.76
HDAC2-216ENST00000523628 MARVELD3Q96A59 401 aa10.3□□□□□ -0.76
HDAC2-216ENST00000523628 TAOK2Q9UL54 1235 aa10.28□□□□□ -0.76
HDAC2-216ENST00000523628 PHF8Q9UPP1 1060 aa10.26□□□□□ -0.77
HDAC2-216ENST00000523628 EMP3P54852 163 aa10.25□□□□□ -0.77
HDAC2-216ENST00000523628 MICALL2Q8IY33 904 aa10.25□□□□□ -0.77
HDAC2-216ENST00000523628 MS4A4AQ96JQ5 239 aa10.25□□□□□ -0.77
HDAC2-216ENST00000523628 ECM2O94769 699 aaPredicted RBP10.24□□□□□ -0.77
HDAC2-216ENST00000523628 HOXB3P14651 431 aaPredicted RBP10.24□□□□□ -0.77
HDAC2-216ENST00000523628 BCL11BQ9C0K0 894 aaPredicted RBP10.23□□□□□ -0.77
HDAC2-216ENST00000523628 RTN4Q9NQC3 1192 aaKnown RBP10.22□□□□□ -0.77
HDAC2-216ENST00000523628 STK24Q9Y6E0 443 aa10.21□□□□□ -0.77
HDAC2-216ENST00000523628 NLRP6P59044 892 aa10.2□□□□□ -0.78
HDAC2-216ENST00000523628 PKD2Q13563 968 aa10.19□□□□□ -0.78
HDAC2-216ENST00000523628 DOK7Q18PE1 504 aa10.19□□□□□ -0.78
HDAC2-216ENST00000523628 TMEM92Q6UXU6 159 aa10.19□□□□□ -0.78
HDAC2-216ENST00000523628 ZNF710Q8N1W2 664 aa10.19□□□□□ -0.78
HDAC2-216ENST00000523628 HS3ST6Q96QI5 342 aa10.19□□□□□ -0.78
HDAC2-216ENST00000523628 FAM205CA6NFA0 338 aa10.18□□□□□ -0.78
HDAC2-216ENST00000523628 POTEB3A0JP26 581 aa10.17□□□□□ -0.78
HDAC2-216ENST00000523628 STK25O00506 426 aa10.17□□□□□ -0.78
HDAC2-216ENST00000523628 HOXB1P14653 301 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms