RNA–Protein interactions for RNA: ENST00000523573.5

TVP23C-207, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-207ENST00000523573 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
TVP23C-207ENST00000523573 CCDC61Q9Y6R9 512 aa16.36■□□□□ 0.21
TVP23C-207ENST00000523573 METRNQ9UJH8 293 aa16.34■□□□□ 0.21
TVP23C-207ENST00000523573 SLC39A7Q92504 469 aa16.33■□□□□ 0.2
TVP23C-207ENST00000523573 C7P10643 843 aa16.32■□□□□ 0.2
TVP23C-207ENST00000523573 MIER1Q8N108 512 aa16.32■□□□□ 0.2
TVP23C-207ENST00000523573 KIF12Q96FN5 646 aa16.28■□□□□ 0.2
TVP23C-207ENST00000523573 ATN1P54259 1190 aaPredicted RBP16.21■□□□□ 0.19
TVP23C-207ENST00000523573 RASEFQ8IZ41 740 aa16.21■□□□□ 0.19
TVP23C-207ENST00000523573 PLSCR2Q9NRY7 297 aa16.19■□□□□ 0.18
TVP23C-207ENST00000523573 MAP3K13O43283 966 aa16.17■□□□□ 0.18
TVP23C-207ENST00000523573 MAMSTRQ6ZN01 415 aa16.17■□□□□ 0.18
TVP23C-207ENST00000523573 PLCD3Q8N3E9 789 aa16.17■□□□□ 0.18
TVP23C-207ENST00000523573 POTEJP0CG39 1038 aa16.16■□□□□ 0.18
TVP23C-207ENST00000523573 BMP2KQ9NSY1 1161 aaPredicted RBP16.15■□□□□ 0.18
TVP23C-207ENST00000523573 TRPC6Q9Y210 931 aa16.12■□□□□ 0.17
TVP23C-207ENST00000523573 TIE1P35590 1138 aa16.11■□□□□ 0.17
TVP23C-207ENST00000523573 POTEMA6NI47 508 aa16.1■□□□□ 0.17
TVP23C-207ENST00000523573 ZBTB47Q9UFB7 747 aaPredicted RBP16.09■□□□□ 0.17
TVP23C-207ENST00000523573 POTEGQ6S5H5 508 aa16.06■□□□□ 0.16
TVP23C-207ENST00000523573 SCUBE2Q9NQ36 999 aa16.06■□□□□ 0.16
TVP23C-207ENST00000523573 POTEFA5A3E0 1075 aa16.01■□□□□ 0.15
TVP23C-207ENST00000523573 TTLL13PA6NNM8 815 aa16.01■□□□□ 0.15
TVP23C-207ENST00000523573 SGIP1Q9BQI5 828 aa16.01■□□□□ 0.15
TVP23C-207ENST00000523573 NUBP1P53384 320 aa16■□□□□ 0.15
TVP23C-207ENST00000523573 PCDHB13Q9Y5F0 798 aa15.99■□□□□ 0.15
TVP23C-207ENST00000523573 FKBP8Q14318 412 aa15.97■□□□□ 0.15
TVP23C-207ENST00000523573 SEC24BO95487 1268 aa15.96■□□□□ 0.15
TVP23C-207ENST00000523573 FAM212AQ96EL1 285 aa15.93■□□□□ 0.14
TVP23C-207ENST00000523573 COLQQ9Y215 455 aaPredicted RBP15.92■□□□□ 0.14
TVP23C-207ENST00000523573 TRIM35Q9UPQ4 493 aa15.91■□□□□ 0.14
TVP23C-207ENST00000523573 IER5LQ5T953 404 aa15.9■□□□□ 0.14
TVP23C-207ENST00000523573 IFNL1Q8IU54 200 aa15.88■□□□□ 0.13
TVP23C-207ENST00000523573 FAM163AQ96GL9 167 aaPredicted RBP15.88■□□□□ 0.13
TVP23C-207ENST00000523573 PCDH10Q9P2E7 1040 aa15.88■□□□□ 0.13
TVP23C-207ENST00000523573 LCE2DQ5TA82 110 aaPredicted RBP15.86■□□□□ 0.13
TVP23C-207ENST00000523573 TMEM106CQ9BVX2 250 aa15.81■□□□□ 0.12
TVP23C-207ENST00000523573 DCAF8Q5TAQ9 597 aa15.75■□□□□ 0.11
TVP23C-207ENST00000523573 FBXO3Q9UK99 471 aa15.75■□□□□ 0.11
TVP23C-207ENST00000523573 PLCG2P16885 1265 aa15.71■□□□□ 0.11
TVP23C-207ENST00000523573 PYGBP11216 843 aa15.7■□□□□ 0.1
TVP23C-207ENST00000523573 SLAIN1Q8ND83 568 aa15.66■□□□□ 0.1
TVP23C-207ENST00000523573 IRX5P78411 483 aaPredicted RBP15.65■□□□□ 0.1
TVP23C-207ENST00000523573 PCDHB8Q9UN66 801 aa15.61■□□□□ 0.09
TVP23C-207ENST00000523573 OCEL1Q9H607 264 aa15.6■□□□□ 0.09
TVP23C-207ENST00000523573 KLHL34Q8N239 644 aa15.57■□□□□ 0.08
TVP23C-207ENST00000523573 VASPP50552 380 aaPredicted RBP15.55■□□□□ 0.08
TVP23C-207ENST00000523573 GSE1Q14687 1217 aa15.54■□□□□ 0.08
TVP23C-207ENST00000523573 ST18O60284 1047 aa15.52■□□□□ 0.08
TVP23C-207ENST00000523573 CDAN1Q8IWY9 1227 aa15.51■□□□□ 0.07
TVP23C-207ENST00000523573 ZNF467Q7Z7K2 595 aaPredicted RBP15.49■□□□□ 0.07
TVP23C-207ENST00000523573 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.46■□□□□ 0.07
TVP23C-207ENST00000523573 CHRM1P11229 460 aaPredicted RBP15.43■□□□□ 0.06
TVP23C-207ENST00000523573 GOLGA2Q08379 1002 aa15.43■□□□□ 0.06
TVP23C-207ENST00000523573 SNPHO15079 494 aa15.41■□□□□ 0.06
TVP23C-207ENST00000523573 MKRN3Q13064 507 aaKnown RBP15.4■□□□□ 0.06
TVP23C-207ENST00000523573 PDCD7Q8N8D1 485 aaKnown RBP15.39■□□□□ 0.05
TVP23C-207ENST00000523573 TMEM121BQ9BXQ6 578 aaPredicted RBP15.38■□□□□ 0.05
TVP23C-207ENST00000523573 PSEN1P49768 467 aa15.35■□□□□ 0.05
TVP23C-207ENST00000523573 C3orf67Q6ZVT6 689 aa15.33■□□□□ 0.04
TVP23C-207ENST00000523573 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.04
TVP23C-207ENST00000523573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.31■□□□□ 0.042e-14■■□□□ 13.7
TVP23C-207ENST00000523573 PDAP1Q13442 181 aaKnown RBP15.27■□□□□ 0.04
TVP23C-207ENST00000523573 SPOCK2Q92563 424 aa15.27■□□□□ 0.04
TVP23C-207ENST00000523573 MARVELD3Q96A59 401 aa15.25■□□□□ 0.03
TVP23C-207ENST00000523573 CIZ1Q9ULV3 898 aaPredicted RBP15.23■□□□□ 0.03
TVP23C-207ENST00000523573 IFNLR1Q8IU57 520 aaPredicted RBP15.22■□□□□ 0.03
TVP23C-207ENST00000523573 ILDR1Q86SU0 546 aaPredicted RBP15.2■□□□□ 0.02
TVP23C-207ENST00000523573 CABP2Q9NPB3 220 aa15.17■□□□□ 0.02
TVP23C-207ENST00000523573 EMP3P54852 163 aa15.14■□□□□ 0.01
TVP23C-207ENST00000523573 DPY19L2Q6NUT2 758 aa15.13■□□□□ 0.01
TVP23C-207ENST00000523573 SPNS2Q8IVW8 549 aa15.13■□□□□ 0.01
TVP23C-207ENST00000523573 G3V3G9 751 aa15.11■□□□□ 0.01
TVP23C-207ENST00000523573 MMRN1Q13201 1228 aa15.1■□□□□ 0.01
TVP23C-207ENST00000523573 BOLA1Q9Y3E2 137 aa15.09■□□□□ 0.01
TVP23C-207ENST00000523573 TRIM41Q8WV44 630 aa15.03■□□□□ -0
TVP23C-207ENST00000523573 HS3ST6Q96QI5 342 aa15.02■□□□□ -0
TVP23C-207ENST00000523573 FAM205CA6NFA0 338 aa15.01□□□□□ -0.01
TVP23C-207ENST00000523573 POTEB3A0JP26 581 aa14.98□□□□□ -0.01
TVP23C-207ENST00000523573 POTEBQ6S5H4 581 aa14.98□□□□□ -0.01
TVP23C-207ENST00000523573 HOXB3P14651 431 aaPredicted RBP14.96□□□□□ -0.01
TVP23C-207ENST00000523573 EFCAB3Q8N7B9 438 aa14.95□□□□□ -0.02
TVP23C-207ENST00000523573 KRTAP3-3Q9BYR6 98 aa14.94□□□□□ -0.02
TVP23C-207ENST00000523573 KRTAP3-2Q9BYR7 98 aa14.94□□□□□ -0.02
TVP23C-207ENST00000523573 ZNF710Q8N1W2 664 aa14.92□□□□□ -0.02
TVP23C-207ENST00000523573 DOK7Q18PE1 504 aa14.9□□□□□ -0.02
TVP23C-207ENST00000523573 HOXB1P14653 301 aaPredicted RBP14.88□□□□□ -0.03
TVP23C-207ENST00000523573 RIOK3O14730 519 aaKnown RBP14.83□□□□□ -0.04
TVP23C-207ENST00000523573 RIMBP2O15034 1052 aa14.82□□□□□ -0.04
TVP23C-207ENST00000523573 SOX12O15370 315 aa14.81□□□□□ -0.04
TVP23C-207ENST00000523573 MICALL2Q8IY33 904 aa14.81□□□□□ -0.04
TVP23C-207ENST00000523573 ERBB3P21860 1342 aa14.81□□□□□ -0.04
TVP23C-207ENST00000523573 RNF25Q96BH1 459 aaPredicted RBP14.78□□□□□ -0.04
TVP23C-207ENST00000523573 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.77□□□□□ -0.05
TVP23C-207ENST00000523573 VGFO15240 615 aaPredicted RBP14.77□□□□□ -0.05
TVP23C-207ENST00000523573 ZFP91Q96JP5 570 aaPredicted RBP14.77□□□□□ -0.05
TVP23C-207ENST00000523573 TMEM92Q6UXU6 159 aa14.75□□□□□ -0.05
TVP23C-207ENST00000523573 MS4A4AQ96JQ5 239 aa14.73□□□□□ -0.05
TVP23C-207ENST00000523573 ZSWIM6Q9HCJ5 1215 aa14.72□□□□□ -0.05
TVP23C-207ENST00000523573 PHF8Q9UPP1 1060 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms