RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 FARP1Q9Y4F1 1045 aaPredicted RBP12.86□□□□□ -0.35
LINC00534-203ENST00000523406 PLCB2Q00722 1185 aa12.84□□□□□ -0.35
LINC00534-203ENST00000523406 RNF25Q96BH1 459 aaPredicted RBP12.83□□□□□ -0.36
LINC00534-203ENST00000523406 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
LINC00534-203ENST00000523406 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
LINC00534-203ENST00000523406 BBXQ8WY36 941 aaPredicted RBP12.79□□□□□ -0.36
LINC00534-203ENST00000523406 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
LINC00534-203ENST00000523406 CHGAP10645 457 aaKnown RBP12.73□□□□□ -0.37
LINC00534-203ENST00000523406 PYGBP11216 843 aa12.72□□□□□ -0.37
LINC00534-203ENST00000523406 HS6ST3Q8IZP7 471 aa12.71□□□□□ -0.37
LINC00534-203ENST00000523406 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
LINC00534-203ENST00000523406 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.71□□□□□ -0.37
LINC00534-203ENST00000523406 TAOK2Q9UL54 1235 aa12.68□□□□□ -0.38
LINC00534-203ENST00000523406 VGFO15240 615 aaPredicted RBP12.66□□□□□ -0.38
LINC00534-203ENST00000523406 DNAJC5Q9H3Z4 198 aa12.66□□□□□ -0.38
LINC00534-203ENST00000523406 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
LINC00534-203ENST00000523406 SGIP1Q9BQI5 828 aa12.64□□□□□ -0.39
LINC00534-203ENST00000523406 PAXIP1Q6ZW49 1069 aaPredicted RBP12.62□□□□□ -0.39
LINC00534-203ENST00000523406 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
LINC00534-203ENST00000523406 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.58□□□□□ -0.4
LINC00534-203ENST00000523406 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
LINC00534-203ENST00000523406 SPRYD3Q8NCJ5 442 aa12.58□□□□□ -0.4
LINC00534-203ENST00000523406 ZFP91Q96JP5 570 aaPredicted RBP12.58□□□□□ -0.4
LINC00534-203ENST00000523406 CFAP44Q96MT7 982 aa12.58□□□□□ -0.4
LINC00534-203ENST00000523406 STK25O00506 426 aa12.57□□□□□ -0.4
LINC00534-203ENST00000523406 ZNF467Q7Z7K2 595 aaPredicted RBP12.56□□□□□ -0.4
LINC00534-203ENST00000523406 NKX1-1Q15270 411 aaPredicted RBP12.53□□□□□ -0.4
LINC00534-203ENST00000523406 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.41
LINC00534-203ENST00000523406 CD44P16070 742 aaKnown RBP12.51□□□□□ -0.41
LINC00534-203ENST00000523406 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
LINC00534-203ENST00000523406 KIF12Q96FN5 646 aa12.51□□□□□ -0.41
LINC00534-203ENST00000523406 PCDHB8Q9UN66 801 aa12.51□□□□□ -0.41
LINC00534-203ENST00000523406 PCDHB13Q9Y5F0 798 aa12.51□□□□□ -0.41
LINC00534-203ENST00000523406 STK24Q9Y6E0 443 aa12.5□□□□□ -0.41
LINC00534-203ENST00000523406 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
LINC00534-203ENST00000523406 PDAP1Q13442 181 aaKnown RBP12.48□□□□□ -0.41
LINC00534-203ENST00000523406 MAP3K13O43283 966 aa12.47□□□□□ -0.41
LINC00534-203ENST00000523406 VSIG10Q8N0Z9 540 aa12.47□□□□□ -0.41
LINC00534-203ENST00000523406 C19orf67A6NJJ6 358 aa12.45□□□□□ -0.42
LINC00534-203ENST00000523406 IFNL1Q8IU54 200 aa12.45□□□□□ -0.42
LINC00534-203ENST00000523406 GTPBP6O43824 516 aaPredicted RBP12.44□□□□□ -0.42
LINC00534-203ENST00000523406 PSEN1P49768 467 aa12.42□□□□□ -0.42
LINC00534-203ENST00000523406 TSHZ2Q9NRE2 1034 aa12.42□□□□□ -0.42
LINC00534-203ENST00000523406 PHF12Q96QT6 1004 aa12.41□□□□□ -0.42
LINC00534-203ENST00000523406 KDM2AQ9Y2K7 1162 aa12.39□□□□□ -0.43
LINC00534-203ENST00000523406 RYDENQ9NUL5 291 aaKnown RBP12.34□□□□□ -0.43
LINC00534-203ENST00000523406 MS4A3Q96HJ5 214 aa12.29□□□□□ -0.44
LINC00534-203ENST00000523406 MFRPQ9BY79 579 aa12.27□□□□□ -0.45
LINC00534-203ENST00000523406 CABP2Q9NPB3 220 aa12.26□□□□□ -0.45
LINC00534-203ENST00000523406 TRPC6Q9Y210 931 aa12.25□□□□□ -0.45
LINC00534-203ENST00000523406 HAX1O00165 279 aa12.24□□□□□ -0.45
LINC00534-203ENST00000523406 EFCAB3Q8N7B9 438 aa12.24□□□□□ -0.45
LINC00534-203ENST00000523406 EVX2Q03828 476 aa12.23□□□□□ -0.45
LINC00534-203ENST00000523406 SOX12O15370 315 aa12.21□□□□□ -0.45
LINC00534-203ENST00000523406 TMEM106CQ9BVX2 250 aa12.21□□□□□ -0.45
LINC00534-203ENST00000523406 FBXO22Q8NEZ5 403 aa12.2□□□□□ -0.46
LINC00534-203ENST00000523406 TIE1P35590 1138 aa12.18□□□□□ -0.46
LINC00534-203ENST00000523406 CLCN6P51797 869 aa12.17□□□□□ -0.46
LINC00534-203ENST00000523406 NLRP6P59044 892 aa12.17□□□□□ -0.46
LINC00534-203ENST00000523406 PHF8Q9UPP1 1060 aa12.17□□□□□ -0.46
LINC00534-203ENST00000523406 GALR2O43603 387 aaPredicted RBP12.16□□□□□ -0.46
LINC00534-203ENST00000523406 CCDC180Q9P1Z9 1646 aa12.15□□□□□ -0.46
LINC00534-203ENST00000523406 TTLL13PA6NNM8 815 aa12.14□□□□□ -0.47
LINC00534-203ENST00000523406 BCANQ96GW7 911 aa12.14□□□□□ -0.47
LINC00534-203ENST00000523406 BMP2KQ9NSY1 1161 aaPredicted RBP12.13□□□□□ -0.47
LINC00534-203ENST00000523406 PPP1R37O75864 691 aa12.12□□□□□ -0.47
LINC00534-203ENST00000523406 GOLGA2Q08379 1002 aa12.1□□□□□ -0.47
LINC00534-203ENST00000523406 CADPS2Q86UW7 1296 aa12.1□□□□□ -0.47
LINC00534-203ENST00000523406 MS4A4AQ96JQ5 239 aa12.09□□□□□ -0.47
LINC00534-203ENST00000523406 MKRN3Q13064 507 aaKnown RBP12.08□□□□□ -0.48
LINC00534-203ENST00000523406 POTEHQ6S545 545 aa12.06□□□□□ -0.48
LINC00534-203ENST00000523406 ILDR1Q86SU0 546 aaPredicted RBP12.05□□□□□ -0.48
LINC00534-203ENST00000523406 TRIM35Q9UPQ4 493 aa12.04□□□□□ -0.48
LINC00534-203ENST00000523406 GABBR2O75899 941 aa12□□□□□ -0.49
LINC00534-203ENST00000523406 ATN1P54259 1190 aaPredicted RBP12□□□□□ -0.49
LINC00534-203ENST00000523406 ATMINO43313 823 aaPredicted RBP11.99□□□□□ -0.49
LINC00534-203ENST00000523406 ASTLQ6HA08 431 aaPredicted RBP11.99□□□□□ -0.49
LINC00534-203ENST00000523406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC00534-203ENST00000523406 WDR70Q9NW82 654 aa11.93□□□□□ -0.5
LINC00534-203ENST00000523406 IRX5P78411 483 aaPredicted RBP11.91□□□□□ -0.5
LINC00534-203ENST00000523406 IER5LQ5T953 404 aa11.91□□□□□ -0.5
LINC00534-203ENST00000523406 PDCD7Q8N8D1 485 aaKnown RBP11.91□□□□□ -0.5
LINC00534-203ENST00000523406 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.5
LINC00534-203ENST00000523406 NBR1Q14596 966 aa11.9□□□□□ -0.5
LINC00534-203ENST00000523406 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
LINC00534-203ENST00000523406 P3H3Q8IVL6 736 aa11.89□□□□□ -0.51
LINC00534-203ENST00000523406 CRISPLD2Q9H0B8 497 aa11.88□□□□□ -0.51
LINC00534-203ENST00000523406 PDE4AP27815 886 aa11.87□□□□□ -0.51
LINC00534-203ENST00000523406 OCEL1Q9H607 264 aa11.87□□□□□ -0.51
LINC00534-203ENST00000523406 KCNV2Q8TDN2 545 aa11.86□□□□□ -0.51
LINC00534-203ENST00000523406 MFSD10Q14728 455 aa11.85□□□□□ -0.51
LINC00534-203ENST00000523406 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
LINC00534-203ENST00000523406 DCBLD2Q96PD2 775 aa11.84□□□□□ -0.51
LINC00534-203ENST00000523406 LARP6Q9BRS8 491 aaKnown RBP11.83□□□□□ -0.52
LINC00534-203ENST00000523406 MICALL2Q8IY33 904 aa11.82□□□□□ -0.52
LINC00534-203ENST00000523406 E2F4Q16254 413 aa11.81□□□□□ -0.52
LINC00534-203ENST00000523406 TMEM121BQ9BXQ6 578 aaPredicted RBP11.8□□□□□ -0.52
LINC00534-203ENST00000523406 ZCCHC6Q5VYS8 1495 aaKnown RBP11.8□□□□□ -0.52
LINC00534-203ENST00000523406 PLCG2P16885 1265 aa11.79□□□□□ -0.52
LINC00534-203ENST00000523406 SP7Q8TDD2 431 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms