RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 METRNQ9UJH8 293 aa11.63□□□□□ -0.55
PCM1-217ENST00000522998 PLEKHG5O94827 1062 aa11.62□□□□□ -0.55
PCM1-217ENST00000522998 SLC39A7Q92504 469 aa11.62□□□□□ -0.55
PCM1-217ENST00000522998 CCDC61Q9Y6R9 512 aa11.62□□□□□ -0.55
PCM1-217ENST00000522998 C7P10643 843 aa11.61□□□□□ -0.55
PCM1-217ENST00000522998 MIER1Q8N108 512 aa11.59□□□□□ -0.55
PCM1-217ENST00000522998 PLSCR2Q9NRY7 297 aa11.59□□□□□ -0.55
PCM1-217ENST00000522998 KIF12Q96FN5 646 aa11.57□□□□□ -0.56
PCM1-217ENST00000522998 ATN1P54259 1190 aaPredicted RBP11.53□□□□□ -0.56
PCM1-217ENST00000522998 MAMSTRQ6ZN01 415 aa11.51□□□□□ -0.57
PCM1-217ENST00000522998 RASEFQ8IZ41 740 aa11.51□□□□□ -0.57
PCM1-217ENST00000522998 POTEJP0CG39 1038 aa11.5□□□□□ -0.57
PCM1-217ENST00000522998 POTEMA6NI47 508 aa11.49□□□□□ -0.57
PCM1-217ENST00000522998 MAP3K13O43283 966 aa11.49□□□□□ -0.57
PCM1-217ENST00000522998 BMP2KQ9NSY1 1161 aaPredicted RBP11.49□□□□□ -0.57
PCM1-217ENST00000522998 PLCD3Q8N3E9 789 aa11.48□□□□□ -0.57
PCM1-217ENST00000522998 TRPC6Q9Y210 931 aa11.47□□□□□ -0.57
PCM1-217ENST00000522998 POTEGQ6S5H5 508 aa11.46□□□□□ -0.57
PCM1-217ENST00000522998 TIE1P35590 1138 aa11.45□□□□□ -0.58
PCM1-217ENST00000522998 SCUBE2Q9NQ36 999 aa11.44□□□□□ -0.58
PCM1-217ENST00000522998 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
PCM1-217ENST00000522998 POTEFA5A3E0 1075 aa11.39□□□□□ -0.59
PCM1-217ENST00000522998 TTLL13PA6NNM8 815 aa11.38□□□□□ -0.59
PCM1-217ENST00000522998 PCDHB13Q9Y5F0 798 aa11.37□□□□□ -0.59
PCM1-217ENST00000522998 SEC24BO95487 1268 aa11.36□□□□□ -0.59
PCM1-217ENST00000522998 SGIP1Q9BQI5 828 aa11.36□□□□□ -0.59
PCM1-217ENST00000522998 NUBP1P53384 320 aa11.35□□□□□ -0.59
PCM1-217ENST00000522998 FAM163AQ96GL9 167 aaPredicted RBP11.33□□□□□ -0.6
PCM1-217ENST00000522998 COLQQ9Y215 455 aaPredicted RBP11.33□□□□□ -0.6
PCM1-217ENST00000522998 PCDH10Q9P2E7 1040 aa11.32□□□□□ -0.6
PCM1-217ENST00000522998 TRIM35Q9UPQ4 493 aa11.32□□□□□ -0.6
PCM1-217ENST00000522998 FKBP8Q14318 412 aa11.31□□□□□ -0.6
PCM1-217ENST00000522998 FAM212AQ96EL1 285 aa11.31□□□□□ -0.6
PCM1-217ENST00000522998 IER5LQ5T953 404 aa11.3□□□□□ -0.6
PCM1-217ENST00000522998 LCE2DQ5TA82 110 aaPredicted RBP11.3□□□□□ -0.6
PCM1-217ENST00000522998 IFNL1Q8IU54 200 aa11.28□□□□□ -0.6
PCM1-217ENST00000522998 TMEM106CQ9BVX2 250 aa11.25□□□□□ -0.61
PCM1-217ENST00000522998 DCAF8Q5TAQ9 597 aa11.19□□□□□ -0.62
PCM1-217ENST00000522998 PLCG2P16885 1265 aa11.18□□□□□ -0.62
PCM1-217ENST00000522998 FBXO3Q9UK99 471 aa11.16□□□□□ -0.62
PCM1-217ENST00000522998 PYGBP11216 843 aa11.15□□□□□ -0.62
PCM1-217ENST00000522998 SLAIN1Q8ND83 568 aa11.15□□□□□ -0.62
PCM1-217ENST00000522998 IRX5P78411 483 aaPredicted RBP11.13□□□□□ -0.63
PCM1-217ENST00000522998 PCDHB8Q9UN66 801 aa11.09□□□□□ -0.63
PCM1-217ENST00000522998 OCEL1Q9H607 264 aa11.08□□□□□ -0.64
PCM1-217ENST00000522998 ST18O60284 1047 aa11.06□□□□□ -0.64
PCM1-217ENST00000522998 CDAN1Q8IWY9 1227 aa11.06□□□□□ -0.64
PCM1-217ENST00000522998 KLHL34Q8N239 644 aa11.05□□□□□ -0.64
PCM1-217ENST00000522998 VASPP50552 380 aaPredicted RBP11.02□□□□□ -0.65
PCM1-217ENST00000522998 GSE1Q14687 1217 aa11.02□□□□□ -0.65
PCM1-217ENST00000522998 ZNF467Q7Z7K2 595 aaPredicted RBP11□□□□□ -0.65
PCM1-217ENST00000522998 EIF2AK3Q9NZJ5 1116 aaKnown RBP11□□□□□ -0.65
PCM1-217ENST00000522998 SNPHO15079 494 aa10.97□□□□□ -0.65
PCM1-217ENST00000522998 GOLGA2Q08379 1002 aa10.97□□□□□ -0.65
PCM1-217ENST00000522998 MKRN3Q13064 507 aaKnown RBP10.95□□□□□ -0.66
PCM1-217ENST00000522998 TMEM121BQ9BXQ6 578 aaPredicted RBP10.95□□□□□ -0.66
PCM1-217ENST00000522998 CHRM1P11229 460 aaPredicted RBP10.93□□□□□ -0.66
PCM1-217ENST00000522998 PDCD7Q8N8D1 485 aaKnown RBP10.93□□□□□ -0.66
PCM1-217ENST00000522998 C3orf67Q6ZVT6 689 aa10.91□□□□□ -0.66
PCM1-217ENST00000522998 PSEN1P49768 467 aa10.9□□□□□ -0.66
PCM1-217ENST00000522998 L3MBTL3Q96JM7 780 aaPredicted RBP10.9□□□□□ -0.66
PCM1-217ENST00000522998 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.88□□□□□ -0.673e-13■■■□□ 18.1
PCM1-217ENST00000522998 MARVELD3Q96A59 401 aa10.86□□□□□ -0.67
PCM1-217ENST00000522998 PDAP1Q13442 181 aaKnown RBP10.84□□□□□ -0.67
PCM1-217ENST00000522998 SPOCK2Q92563 424 aa10.82□□□□□ -0.68
PCM1-217ENST00000522998 CIZ1Q9ULV3 898 aaPredicted RBP10.81□□□□□ -0.68
PCM1-217ENST00000522998 SPNS2Q8IVW8 549 aa10.79□□□□□ -0.68
PCM1-217ENST00000522998 EMP3P54852 163 aa10.78□□□□□ -0.68
PCM1-217ENST00000522998 ILDR1Q86SU0 546 aaPredicted RBP10.78□□□□□ -0.68
PCM1-217ENST00000522998 IFNLR1Q8IU57 520 aaPredicted RBP10.78□□□□□ -0.68
PCM1-217ENST00000522998 CABP2Q9NPB3 220 aa10.78□□□□□ -0.68
PCM1-217ENST00000522998 MMRN1Q13201 1228 aa10.77□□□□□ -0.69
PCM1-217ENST00000522998 DPY19L2Q6NUT2 758 aa10.76□□□□□ -0.69
PCM1-217ENST00000522998 G3V3G9 751 aa10.75□□□□□ -0.69
PCM1-217ENST00000522998 BOLA1Q9Y3E2 137 aa10.72□□□□□ -0.69
PCM1-217ENST00000522998 FAM205CA6NFA0 338 aa10.7□□□□□ -0.7
PCM1-217ENST00000522998 HS3ST6Q96QI5 342 aa10.7□□□□□ -0.7
PCM1-217ENST00000522998 POTEB3A0JP26 581 aa10.67□□□□□ -0.7
PCM1-217ENST00000522998 POTEBQ6S5H4 581 aa10.67□□□□□ -0.7
PCM1-217ENST00000522998 HOXB3P14651 431 aaPredicted RBP10.64□□□□□ -0.71
PCM1-217ENST00000522998 TRIM41Q8WV44 630 aa10.64□□□□□ -0.71
PCM1-217ENST00000522998 KRTAP3-3Q9BYR6 98 aa10.64□□□□□ -0.71
PCM1-217ENST00000522998 KRTAP3-2Q9BYR7 98 aa10.64□□□□□ -0.71
PCM1-217ENST00000522998 ZNF710Q8N1W2 664 aa10.62□□□□□ -0.71
PCM1-217ENST00000522998 EFCAB3Q8N7B9 438 aa10.62□□□□□ -0.71
PCM1-217ENST00000522998 DOK7Q18PE1 504 aa10.6□□□□□ -0.71
PCM1-217ENST00000522998 HOXB1P14653 301 aaPredicted RBP10.58□□□□□ -0.72
PCM1-217ENST00000522998 ERBB3P21860 1342 aa10.55□□□□□ -0.72
PCM1-217ENST00000522998 RIMBP2O15034 1052 aa10.54□□□□□ -0.72
PCM1-217ENST00000522998 MICALL2Q8IY33 904 aa10.52□□□□□ -0.73
PCM1-217ENST00000522998 RIOK3O14730 519 aaKnown RBP10.51□□□□□ -0.73
PCM1-217ENST00000522998 SOX12O15370 315 aa10.5□□□□□ -0.73
PCM1-217ENST00000522998 TMEM92Q6UXU6 159 aa10.48□□□□□ -0.73
PCM1-217ENST00000522998 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.47□□□□□ -0.73
PCM1-217ENST00000522998 VGFO15240 615 aaPredicted RBP10.47□□□□□ -0.73
PCM1-217ENST00000522998 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
PCM1-217ENST00000522998 RNF25Q96BH1 459 aaPredicted RBP10.47□□□□□ -0.73
PCM1-217ENST00000522998 ZFP91Q96JP5 570 aaPredicted RBP10.47□□□□□ -0.73
PCM1-217ENST00000522998 ZSWIM6Q9HCJ5 1215 aa10.46□□□□□ -0.73
PCM1-217ENST00000522998 MS4A4AQ96JQ5 239 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms