RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 RTL5Q5HYW3 569 aaPredicted RBP6.49□□□□□ -1.37
PCM1-215ENST00000522275 NAP1L2Q9ULW6 460 aaPredicted RBP6.49□□□□□ -1.37
PCM1-215ENST00000522275 HAP1P54257 671 aaPredicted RBP6.48□□□□□ -1.37
PCM1-215ENST00000522275 SAMD1Q6SPF0 538 aaPredicted RBP6.48□□□□□ -1.37
PCM1-215ENST00000522275 ITGAEP38570 1179 aa6.47□□□□□ -1.37
PCM1-215ENST00000522275 NPM2Q86SE8 214 aaKnown RBP6.47□□□□□ -1.37
PCM1-215ENST00000522275 ZNF326Q5BKZ1 582 aaKnown RBP6.46□□□□□ -1.37
PCM1-215ENST00000522275 SLC4A1APQ9BWU0 796 aaKnown RBP6.46□□□□□ -1.37
PCM1-215ENST00000522275 CHMP4BQ9H444 224 aaKnown RBP6.46□□□□□ -1.38
PCM1-215ENST00000522275 NOP58Q9Y2X3 529 aaKnown RBP6.45□□□□□ -1.38
PCM1-215ENST00000522275 NPM3O75607 178 aaKnown RBP6.45□□□□□ -1.38
PCM1-215ENST00000522275 HSP90AA2PQ14568 343 aaPredicted RBP6.45□□□□□ -1.38
PCM1-215ENST00000522275 BBXQ8WY36 941 aaPredicted RBP6.45□□□□□ -1.38
PCM1-215ENST00000522275 BRPF3Q9ULD4 1205 aa6.44□□□□□ -1.38
PCM1-215ENST00000522275 PAK3O75914 559 aaPredicted RBP6.43□□□□□ -1.38
PCM1-215ENST00000522275 RRP9O43818 475 aaKnown RBP6.42□□□□□ -1.38
PCM1-215ENST00000522275 C14orf37Q86TY3 774 aa6.42□□□□□ -1.38
PCM1-215ENST00000522275 WASHC2CQ9Y4E1 1318 aa6.41□□□□□ -1.38
PCM1-215ENST00000522275 CDK11AQ9UQ88 783 aaPredicted RBP6.41□□□□□ -1.38
PCM1-215ENST00000522275 WASHC2AQ641Q2 1341 aa6.4□□□□□ -1.38
PCM1-215ENST00000522275 GTF2E1P29083 439 aaPredicted RBP6.4□□□□□ -1.39
PCM1-215ENST00000522275 IPO4Q8TEX9 1081 aaKnown RBP6.4□□□□□ -1.39
PCM1-215ENST00000522275 PRDM4Q9UKN5 801 aa6.4□□□□□ -1.39
PCM1-215ENST00000522275 IRX6P78412 446 aaPredicted RBP6.39□□□□□ -1.39
PCM1-215ENST00000522275 POTEHQ6S545 545 aa6.39□□□□□ -1.39
PCM1-215ENST00000522275 ZFP91Q96JP5 570 aaPredicted RBP6.38□□□□□ -1.39
PCM1-215ENST00000522275 RGS3P49796 1198 aa6.38□□□□□ -1.39
PCM1-215ENST00000522275 FAM43AQ8N2R8 423 aa6.37□□□□□ -1.39
PCM1-215ENST00000522275 CNKSR2Q8WXI2 1034 aa6.37□□□□□ -1.39
PCM1-215ENST00000522275 NISCHQ9Y2I1 1504 aa6.36□□□□□ -1.39
PCM1-215ENST00000522275 STAC3Q96MF2 364 aa6.36□□□□□ -1.39
PCM1-215ENST00000522275 CANXP27824 592 aaKnown RBP6.36□□□□□ -1.39
PCM1-215ENST00000522275 NEFMP07197 916 aa6.35□□□□□ -1.39
PCM1-215ENST00000522275 HSP90AA1P07900 732 aaKnown RBP6.35□□□□□ -1.39
PCM1-215ENST00000522275 SECISBP2LQ93073 1101 aaKnown RBP6.34□□□□□ -1.39
PCM1-215ENST00000522275 BCCIPQ9P287 314 aaKnown RBP eCLIP6.34□□□□□ -1.39
PCM1-215ENST00000522275 CALD1Q05682 793 aaKnown RBP6.33□□□□□ -1.4
PCM1-215ENST00000522275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.33□□□□□ -1.4
PCM1-215ENST00000522275 CNGB1Q14028 1251 aaPredicted RBP6.32□□□□□ -1.4
PCM1-215ENST00000522275 FTSJ3Q8IY81 847 aaKnown RBP6.32□□□□□ -1.4
PCM1-215ENST00000522275 USP35Q9P2H5 1018 aa6.32□□□□□ -1.4
PCM1-215ENST00000522275 TEX2Q8IWB9 1127 aa6.32□□□□□ -1.4
PCM1-215ENST00000522275 CHRM1P11229 460 aaPredicted RBP6.31□□□□□ -1.4
PCM1-215ENST00000522275 PLCD3Q8N3E9 789 aa6.3□□□□□ -1.4
PCM1-215ENST00000522275 ZBTB47Q9UFB7 747 aaPredicted RBP6.3□□□□□ -1.4
PCM1-215ENST00000522275 IPO9Q96P70 1041 aaKnown RBP6.3□□□□□ -1.4
PCM1-215ENST00000522275 TAOK2Q9UL54 1235 aa6.3□□□□□ -1.4
PCM1-215ENST00000522275 GSE1Q14687 1217 aa6.29□□□□□ -1.4
PCM1-215ENST00000522275 RNF39Q9H2S5 420 aa6.29□□□□□ -1.4
PCM1-215ENST00000522275 CDK11BP21127 795 aaKnown RBP6.29□□□□□ -1.4
PCM1-215ENST00000522275 AMER1Q5JTC6 1135 aaPredicted RBP6.29□□□□□ -1.4
PCM1-215ENST00000522275 HSP90B1P14625 803 aaKnown RBP6.28□□□□□ -1.4
PCM1-215ENST00000522275 CENPJQ9HC77 1338 aaPredicted RBP6.27□□□□□ -1.41
PCM1-215ENST00000522275 ZNF830Q96NB3 372 aaPredicted RBP6.27□□□□□ -1.41
PCM1-215ENST00000522275 ZBTB22O15209 634 aa6.26□□□□□ -1.41
PCM1-215ENST00000522275 CNPY4Q8N129 248 aa6.26□□□□□ -1.41
PCM1-215ENST00000522275 PPM1GO15355 546 aaPredicted RBP6.26□□□□□ -1.41
PCM1-215ENST00000522275 ANP32AP39687 249 aaKnown RBP6.25□□□□□ -1.41
PCM1-215ENST00000522275 KCNH8Q96L42 1107 aa6.25□□□□□ -1.41
PCM1-215ENST00000522275 PDCL3Q9H2J4 239 aa6.25□□□□□ -1.41
PCM1-215ENST00000522275 RNF216Q9NWF9 866 aaPredicted RBP6.25□□□□□ -1.41
PCM1-215ENST00000522275 KCNG1Q9UIX4 513 aa6.25□□□□□ -1.41
PCM1-215ENST00000522275 RRAGDQ9NQL2 400 aaPredicted RBP6.24□□□□□ -1.41
PCM1-215ENST00000522275 SHROOM4Q9ULL8 1493 aa6.24□□□□□ -1.41
PCM1-215ENST00000522275 HOXD11P31277 338 aaPredicted RBP6.24□□□□□ -1.41
PCM1-215ENST00000522275 FBXO3Q9UK99 471 aa6.24□□□□□ -1.41
PCM1-215ENST00000522275 DCAF11Q8TEB1 546 aa6.23□□□□□ -1.41
PCM1-215ENST00000522275 TMEM51Q9NW97 253 aa6.23□□□□□ -1.41
PCM1-215ENST00000522275 VGLL3A8MV65 326 aa6.23□□□□□ -1.41
PCM1-215ENST00000522275 NCLP19338 710 aaKnown RBP6.23□□□□□ -1.41
PCM1-215ENST00000522275 FRAT1Q92837 279 aaPredicted RBP6.23□□□□□ -1.41
PCM1-215ENST00000522275 LAS1LQ9Y4W2 734 aaKnown RBP6.23□□□□□ -1.41
PCM1-215ENST00000522275 DCAF8L1A6NGE4 600 aa6.22□□□□□ -1.41
PCM1-215ENST00000522275 DCAF8L2P0C7V8 631 aa6.22□□□□□ -1.41
PCM1-215ENST00000522275 PRDM10Q9NQV6 1147 aa6.22□□□□□ -1.41
PCM1-215ENST00000522275 ARID4BQ4LE39 1312 aaPredicted RBP6.21□□□□□ -1.41
PCM1-215ENST00000522275 TPRNQ4KMQ1 711 aa6.21□□□□□ -1.42
PCM1-215ENST00000522275 PNNQ9H307 717 aaKnown RBP6.21□□□□□ -1.42
PCM1-215ENST00000522275 C1QBPQ07021 282 aaKnown RBP6.2□□□□□ -1.42
PCM1-215ENST00000522275 WWC1Q8IX03 1113 aa6.2□□□□□ -1.42
PCM1-215ENST00000522275 ZHX1Q9UKY1 873 aaPredicted RBP6.2□□□□□ -1.42
PCM1-215ENST00000522275 POLR3GLQ9BT43 218 aa6.2□□□□□ -1.42
PCM1-215ENST00000522275 RGS22Q8NE09 1264 aa6.19□□□□□ -1.42
PCM1-215ENST00000522275 DDRGK1Q96HY6 314 aa6.19□□□□□ -1.42
PCM1-215ENST00000522275 PPP4R2Q9NY27 417 aa6.17□□□□□ -1.42
PCM1-215ENST00000522275 CLCN1P35523 988 aa6.16□□□□□ -1.42
PCM1-215ENST00000522275 SMAP1Q8IYB5 467 aaPredicted RBP6.16□□□□□ -1.42
PCM1-215ENST00000522275 TRIM52Q96A61 297 aa6.16□□□□□ -1.42
PCM1-215ENST00000522275 IRX3P78415 501 aaPredicted RBP6.15□□□□□ -1.43
PCM1-215ENST00000522275 TMED8Q6PL24 325 aaPredicted RBP6.15□□□□□ -1.43
PCM1-215ENST00000522275 PPP4R3BQ5MIZ7 849 aa6.14□□□□□ -1.43
PCM1-215ENST00000522275 VGFO15240 615 aaPredicted RBP6.14□□□□□ -1.43
PCM1-215ENST00000522275 NFKBIBQ15653 356 aa6.14□□□□□ -1.43
PCM1-215ENST00000522275 CCDC9Q9Y3X0 531 aaKnown RBP6.14□□□□□ -1.43
PCM1-215ENST00000522275 PATL2C9JE40 543 aaKnown RBP6.13□□□□□ -1.43
PCM1-215ENST00000522275 DNAJC5BQ9UF47 199 aa6.13□□□□□ -1.43
PCM1-215ENST00000522275 IGSF3O75054 1194 aa6.13□□□□□ -1.43
PCM1-215ENST00000522275 FAM193AP78312 1265 aa6.13□□□□□ -1.43
PCM1-215ENST00000522275 UTP14CQ5TAP6 766 aaKnown RBP6.13□□□□□ -1.43
PCM1-215ENST00000522275 B4GALNT3Q6L9W6 998 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms