RNA–Protein interactions for RNA: ENST00000522139.1

CNOT8-220, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 3

Gene CNOT8, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-220ENST00000522139 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
CNOT8-220ENST00000522139 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
CNOT8-220ENST00000522139 GSE1Q14687 1217 aa12.27□□□□□ -0.45
CNOT8-220ENST00000522139 HAP1P54257 671 aaPredicted RBP12.26□□□□□ -0.45
CNOT8-220ENST00000522139 BBXQ8WY36 941 aaPredicted RBP12.26□□□□□ -0.45
CNOT8-220ENST00000522139 PAK3O75914 559 aaPredicted RBP12.25□□□□□ -0.45
CNOT8-220ENST00000522139 DCAF8Q5TAQ9 597 aa12.25□□□□□ -0.45
CNOT8-220ENST00000522139 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.22□□□□□ -0.45
CNOT8-220ENST00000522139 EVX2Q03828 476 aa12.2□□□□□ -0.46
CNOT8-220ENST00000522139 CHGAP10645 457 aaKnown RBP12.19□□□□□ -0.46
CNOT8-220ENST00000522139 SP7Q8TDD2 431 aaPredicted RBP12.19□□□□□ -0.46
CNOT8-220ENST00000522139 FAM212AQ96EL1 285 aa12.18□□□□□ -0.46
CNOT8-220ENST00000522139 ZRANB1Q9UGI0 708 aa12.18□□□□□ -0.46
CNOT8-220ENST00000522139 PAXIP1Q6ZW49 1069 aaPredicted RBP12.17□□□□□ -0.46
CNOT8-220ENST00000522139 RASEFQ8IZ41 740 aa12.17□□□□□ -0.46
CNOT8-220ENST00000522139 RNF25Q96BH1 459 aaPredicted RBP12.17□□□□□ -0.46
CNOT8-220ENST00000522139 CFAP44Q96MT7 982 aa12.15□□□□□ -0.46
CNOT8-220ENST00000522139 ZNF579Q8NAF0 562 aaKnown RBP12.13□□□□□ -0.47
CNOT8-220ENST00000522139 TSPYL2Q9H2G4 693 aaPredicted RBP12.13□□□□□ -0.47
CNOT8-220ENST00000522139 CHRM1P11229 460 aaPredicted RBP12.09□□□□□ -0.47
CNOT8-220ENST00000522139 CLCN6P51797 869 aa12.09□□□□□ -0.47
CNOT8-220ENST00000522139 RIOK3O14730 519 aaKnown RBP12.08□□□□□ -0.48
CNOT8-220ENST00000522139 HS6ST3Q8IZP7 471 aa12.08□□□□□ -0.48
CNOT8-220ENST00000522139 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
CNOT8-220ENST00000522139 SPRYD3Q8NCJ5 442 aa12.08□□□□□ -0.48
CNOT8-220ENST00000522139 DNAJC5Q9H3Z4 198 aa12.08□□□□□ -0.48
CNOT8-220ENST00000522139 CCDC61Q9Y6R9 512 aa12.06□□□□□ -0.48
CNOT8-220ENST00000522139 PYGBP11216 843 aa12.03□□□□□ -0.48
CNOT8-220ENST00000522139 PHF12Q96QT6 1004 aa12.03□□□□□ -0.48
CNOT8-220ENST00000522139 TAOK2Q9UL54 1235 aa12.03□□□□□ -0.48
CNOT8-220ENST00000522139 GABBR2O75899 941 aa12.02□□□□□ -0.49
CNOT8-220ENST00000522139 VGFO15240 615 aaPredicted RBP11.99□□□□□ -0.49
CNOT8-220ENST00000522139 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
CNOT8-220ENST00000522139 TSHZ2Q9NRE2 1034 aa11.97□□□□□ -0.49
CNOT8-220ENST00000522139 KDM2AQ9Y2K7 1162 aa11.97□□□□□ -0.49
CNOT8-220ENST00000522139 STK25O00506 426 aa11.96□□□□□ -0.49
CNOT8-220ENST00000522139 NKX1-1Q15270 411 aaPredicted RBP11.95□□□□□ -0.5
CNOT8-220ENST00000522139 KIF12Q96FN5 646 aa11.94□□□□□ -0.5
CNOT8-220ENST00000522139 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.92□□□□□ -0.5
CNOT8-220ENST00000522139 ZFP91Q96JP5 570 aaPredicted RBP11.92□□□□□ -0.5
CNOT8-220ENST00000522139 GALR2O43603 387 aaPredicted RBP11.9□□□□□ -0.5
CNOT8-220ENST00000522139 MS4A3Q96HJ5 214 aa11.9□□□□□ -0.5
CNOT8-220ENST00000522139 STK24Q9Y6E0 443 aa11.9□□□□□ -0.5
CNOT8-220ENST00000522139 MAP3K13O43283 966 aa11.89□□□□□ -0.51
CNOT8-220ENST00000522139 BCL11BQ9C0K0 894 aaPredicted RBP11.89□□□□□ -0.51
CNOT8-220ENST00000522139 PCDHB13Q9Y5F0 798 aa11.87□□□□□ -0.51
CNOT8-220ENST00000522139 GTPBP6O43824 516 aaPredicted RBP11.86□□□□□ -0.51
CNOT8-220ENST00000522139 DCBLD2Q96PD2 775 aa11.84□□□□□ -0.51
CNOT8-220ENST00000522139 ZNF467Q7Z7K2 595 aaPredicted RBP11.83□□□□□ -0.52
CNOT8-220ENST00000522139 BCANQ96GW7 911 aa11.83□□□□□ -0.52
CNOT8-220ENST00000522139 PCDHB8Q9UN66 801 aa11.82□□□□□ -0.52
CNOT8-220ENST00000522139 IFNL1Q8IU54 200 aa11.79□□□□□ -0.52
CNOT8-220ENST00000522139 PDAP1Q13442 181 aaKnown RBP11.77□□□□□ -0.53
CNOT8-220ENST00000522139 TIE1P35590 1138 aa11.75□□□□□ -0.53
CNOT8-220ENST00000522139 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
CNOT8-220ENST00000522139 PSEN1P49768 467 aa11.73□□□□□ -0.53
CNOT8-220ENST00000522139 ASTLQ6HA08 431 aaPredicted RBP11.72□□□□□ -0.53
CNOT8-220ENST00000522139 RYDENQ9NUL5 291 aaKnown RBP11.72□□□□□ -0.53
CNOT8-220ENST00000522139 TRPC6Q9Y210 931 aa11.72□□□□□ -0.53
CNOT8-220ENST00000522139 ATMINO43313 823 aaPredicted RBP11.7□□□□□ -0.54
CNOT8-220ENST00000522139 BMP2KQ9NSY1 1161 aaPredicted RBP11.7□□□□□ -0.54
CNOT8-220ENST00000522139 TTLL13PA6NNM8 815 aa11.67□□□□□ -0.54
CNOT8-220ENST00000522139 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
CNOT8-220ENST00000522139 ATN1P54259 1190 aaPredicted RBP11.65□□□□□ -0.54
CNOT8-220ENST00000522139 SLC39A7Q92504 469 aa11.61□□□□□ -0.55
CNOT8-220ENST00000522139 MFRPQ9BY79 579 aa11.61□□□□□ -0.55
CNOT8-220ENST00000522139 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
CNOT8-220ENST00000522139 TRIM35Q9UPQ4 493 aa11.6□□□□□ -0.55
CNOT8-220ENST00000522139 EFCAB3Q8N7B9 438 aa11.59□□□□□ -0.55
CNOT8-220ENST00000522139 CABP2Q9NPB3 220 aa11.59□□□□□ -0.55
CNOT8-220ENST00000522139 PRKCSHP14314 528 aaPredicted RBP11.58□□□□□ -0.56
CNOT8-220ENST00000522139 C7P10643 843 aa11.57□□□□□ -0.56
CNOT8-220ENST00000522139 IER5LQ5T953 404 aa11.56□□□□□ -0.56
CNOT8-220ENST00000522139 METRNQ9UJH8 293 aa11.55□□□□□ -0.56
CNOT8-220ENST00000522139 GOLGA2Q08379 1002 aa11.54□□□□□ -0.56
CNOT8-220ENST00000522139 NBR1Q14596 966 aa11.54□□□□□ -0.56
CNOT8-220ENST00000522139 CADPS2Q86UW7 1296 aa11.54□□□□□ -0.56
CNOT8-220ENST00000522139 PHF8Q9UPP1 1060 aa11.52□□□□□ -0.57
CNOT8-220ENST00000522139 SOX12O15370 315 aa11.51□□□□□ -0.57
CNOT8-220ENST00000522139 PPP1R37O75864 691 aa11.51□□□□□ -0.57
CNOT8-220ENST00000522139 NLRP6P59044 892 aa11.51□□□□□ -0.57
CNOT8-220ENST00000522139 FBXO22Q8NEZ5 403 aa11.51□□□□□ -0.57
CNOT8-220ENST00000522139 TPRNQ4KMQ1 711 aa11.49□□□□□ -0.57
CNOT8-220ENST00000522139 MKRN3Q13064 507 aaKnown RBP11.48□□□□□ -0.57
CNOT8-220ENST00000522139 SEC24BO95487 1268 aa11.47□□□□□ -0.57
CNOT8-220ENST00000522139 WDR70Q9NW82 654 aa11.44□□□□□ -0.58
CNOT8-220ENST00000522139 PLCG2P16885 1265 aa11.43□□□□□ -0.58
CNOT8-220ENST00000522139 LHX8Q68G74 356 aa11.43□□□□□ -0.58
CNOT8-220ENST00000522139 IRX5P78411 483 aaPredicted RBP11.42□□□□□ -0.58
CNOT8-220ENST00000522139 MS4A4AQ96JQ5 239 aa11.41□□□□□ -0.58
CNOT8-220ENST00000522139 OCEL1Q9H607 264 aa11.41□□□□□ -0.58
CNOT8-220ENST00000522139 COLQQ9Y215 455 aaPredicted RBP11.41□□□□□ -0.58
CNOT8-220ENST00000522139 POTEFA5A3E0 1075 aa11.4□□□□□ -0.58
CNOT8-220ENST00000522139 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.39□□□□□ -0.59
CNOT8-220ENST00000522139 P3H3Q8IVL6 736 aa11.38□□□□□ -0.59
CNOT8-220ENST00000522139 KCNV2Q8TDN2 545 aa11.36□□□□□ -0.59
CNOT8-220ENST00000522139 POTEB2H3BUK9 544 aa11.35□□□□□ -0.59
CNOT8-220ENST00000522139 ILDR1Q86SU0 546 aaPredicted RBP11.34□□□□□ -0.59
CNOT8-220ENST00000522139 PDCD7Q8N8D1 485 aaKnown RBP11.33□□□□□ -0.6
CNOT8-220ENST00000522139 MAMSTRQ6ZN01 415 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms