RNA–Protein interactions for RNA: ENST00000521656.1

CHMP7-209, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-209ENST00000521656 ERICH6Q7L0X2 663 aa7.5□□□□□ -1.21
CHMP7-209ENST00000521656 ZNF692Q9BU19 519 aaPredicted RBP7.49□□□□□ -1.21
CHMP7-209ENST00000521656 FARP1Q9Y4F1 1045 aaPredicted RBP7.49□□□□□ -1.21
CHMP7-209ENST00000521656 DCAF8L2P0C7V8 631 aa7.47□□□□□ -1.21
CHMP7-209ENST00000521656 ZNF579Q8NAF0 562 aaKnown RBP7.47□□□□□ -1.21
CHMP7-209ENST00000521656 GTF3C3Q9Y5Q9 886 aa7.47□□□□□ -1.21
CHMP7-209ENST00000521656 LCE2DQ5TA82 110 aaPredicted RBP7.44□□□□□ -1.22
CHMP7-209ENST00000521656 RANGAP1P46060 587 aaPredicted RBP7.43□□□□□ -1.22
CHMP7-209ENST00000521656 GALR2O43603 387 aaPredicted RBP7.42□□□□□ -1.22
CHMP7-209ENST00000521656 ZRANB1Q9UGI0 708 aa7.4□□□□□ -1.22
CHMP7-209ENST00000521656 FAM163AQ96GL9 167 aaPredicted RBP7.38□□□□□ -1.23
CHMP7-209ENST00000521656 KDM2AQ9Y2K7 1162 aa7.37□□□□□ -1.23
CHMP7-209ENST00000521656 MKRN4PQ13434 485 aaPredicted RBP7.36□□□□□ -1.23
CHMP7-209ENST00000521656 PABPN1Q86U42 306 aaKnown RBP eCLIP7.35□□□□□ -1.23
CHMP7-209ENST00000521656 POTEJP0CG39 1038 aa7.34□□□□□ -1.23
CHMP7-209ENST00000521656 MAMSTRQ6ZN01 415 aa7.34□□□□□ -1.23
CHMP7-209ENST00000521656 PELP1Q8IZL8 1130 aaKnown RBP7.34□□□□□ -1.23
CHMP7-209ENST00000521656 TMEM132AQ24JP5 1023 aa7.31□□□□□ -1.24
CHMP7-209ENST00000521656 C14orf37Q86TY3 774 aa7.3□□□□□ -1.24
CHMP7-209ENST00000521656 CDAN1Q8IWY9 1227 aa7.3□□□□□ -1.24
CHMP7-209ENST00000521656 METRNQ9UJH8 293 aa7.3□□□□□ -1.24
CHMP7-209ENST00000521656 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.29□□□□□ -1.24
CHMP7-209ENST00000521656 C7P10643 843 aa7.26□□□□□ -1.25
CHMP7-209ENST00000521656 SLC39A7Q92504 469 aa7.26□□□□□ -1.25
CHMP7-209ENST00000521656 PODXL2Q9NZ53 605 aa7.26□□□□□ -1.25
CHMP7-209ENST00000521656 SCUBE2Q9NQ36 999 aa7.25□□□□□ -1.25
CHMP7-209ENST00000521656 FBXO3Q9UK99 471 aa7.25□□□□□ -1.25
CHMP7-209ENST00000521656 NBR1Q14596 966 aa7.24□□□□□ -1.25
CHMP7-209ENST00000521656 ASTLQ6HA08 431 aaPredicted RBP7.23□□□□□ -1.25
CHMP7-209ENST00000521656 PAXIP1Q6ZW49 1069 aaPredicted RBP7.23□□□□□ -1.25
CHMP7-209ENST00000521656 BBXQ8WY36 941 aaPredicted RBP7.22□□□□□ -1.25
CHMP7-209ENST00000521656 CFAP44Q96MT7 982 aa7.22□□□□□ -1.25
CHMP7-209ENST00000521656 PHF12Q96QT6 1004 aa7.22□□□□□ -1.25
CHMP7-209ENST00000521656 MMRN1Q13201 1228 aa7.2□□□□□ -1.26
CHMP7-209ENST00000521656 ATMINO43313 823 aaPredicted RBP7.19□□□□□ -1.26
CHMP7-209ENST00000521656 PAK3O75914 559 aaPredicted RBP7.19□□□□□ -1.26
CHMP7-209ENST00000521656 CREBZFQ9NS37 354 aa7.18□□□□□ -1.26
CHMP7-209ENST00000521656 PKD2Q13563 968 aa7.16□□□□□ -1.26
CHMP7-209ENST00000521656 VASPP50552 380 aaPredicted RBP7.14□□□□□ -1.27
CHMP7-209ENST00000521656 SPNS2Q8IVW8 549 aa7.14□□□□□ -1.27
CHMP7-209ENST00000521656 MS4A3Q96HJ5 214 aa7.12□□□□□ -1.27
CHMP7-209ENST00000521656 TSHZ2Q9NRE2 1034 aa7.12□□□□□ -1.27
CHMP7-209ENST00000521656 SPRYD3Q8NCJ5 442 aa7.09□□□□□ -1.27
CHMP7-209ENST00000521656 POTEFA5A3E0 1075 aa7.08□□□□□ -1.28
CHMP7-209ENST00000521656 NPM1P06748 294 aaKnown RBP eCLIP7.08□□□□□ -1.28
CHMP7-209ENST00000521656 IFNLR1Q8IU57 520 aaPredicted RBP7.08□□□□□ -1.28
CHMP7-209ENST00000521656 SUPT5HO00267 1087 aaKnown RBP7.07□□□□□ -1.28
CHMP7-209ENST00000521656 ATN1P54259 1190 aaPredicted RBP7.07□□□□□ -1.28
CHMP7-209ENST00000521656 NPM2Q86SE8 214 aaKnown RBP7.07□□□□□ -1.28
CHMP7-209ENST00000521656 ST18O60284 1047 aa7.06□□□□□ -1.28
CHMP7-209ENST00000521656 KLHL34Q8N239 644 aa7.05□□□□□ -1.28
CHMP7-209ENST00000521656 PROM2Q8N271 834 aa7.04□□□□□ -1.28
CHMP7-209ENST00000521656 DNAJC5Q9H3Z4 198 aa7.02□□□□□ -1.29
CHMP7-209ENST00000521656 STAG3Q9UJ98 1225 aa7.01□□□□□ -1.29
CHMP7-209ENST00000521656 ECM2O94769 699 aaPredicted RBP7□□□□□ -1.29
CHMP7-209ENST00000521656 SPDYE4A6NLX3 237 aa6.97□□□□□ -1.29
CHMP7-209ENST00000521656 TRIM26Q12899 539 aaPredicted RBP6.97□□□□□ -1.29
CHMP7-209ENST00000521656 MNX1P50219 401 aaPredicted RBP6.96□□□□□ -1.3
CHMP7-209ENST00000521656 BMP2KQ9NSY1 1161 aaPredicted RBP6.96□□□□□ -1.3
CHMP7-209ENST00000521656 UBTFP17480 764 aaKnown RBP6.95□□□□□ -1.3
CHMP7-209ENST00000521656 SLAIN1Q8ND83 568 aa6.95□□□□□ -1.3
CHMP7-209ENST00000521656 COLQQ9Y215 455 aaPredicted RBP6.95□□□□□ -1.3
CHMP7-209ENST00000521656 SEC24BO95487 1268 aa6.94□□□□□ -1.3
CHMP7-209ENST00000521656 TMEM121BQ9BXQ6 578 aaPredicted RBP6.94□□□□□ -1.3
CHMP7-209ENST00000521656 RGL2O15211 777 aa6.9□□□□□ -1.3
CHMP7-209ENST00000521656 TIE1P35590 1138 aa6.9□□□□□ -1.3
CHMP7-209ENST00000521656 TRPC6Q9Y210 931 aa6.9□□□□□ -1.3
CHMP7-209ENST00000521656 TTBK1Q5TCY1 1321 aaPredicted RBP6.88□□□□□ -1.31
CHMP7-209ENST00000521656 SPOCK2Q92563 424 aa6.88□□□□□ -1.31
CHMP7-209ENST00000521656 KIF12Q96FN5 646 aa6.88□□□□□ -1.31
CHMP7-209ENST00000521656 CCDC61Q9Y6R9 512 aa6.88□□□□□ -1.31
CHMP7-209ENST00000521656 CHGAP10645 457 aaKnown RBP6.87□□□□□ -1.31
CHMP7-209ENST00000521656 MYT1Q01538 1121 aa6.86□□□□□ -1.31
CHMP7-209ENST00000521656 TSPYL2Q9H2G4 693 aaPredicted RBP6.86□□□□□ -1.31
CHMP7-209ENST00000521656 HRCP23327 699 aa6.85□□□□□ -1.31
CHMP7-209ENST00000521656 IER5LQ5T953 404 aa6.85□□□□□ -1.31
CHMP7-209ENST00000521656 MARVELD3Q96A59 401 aa6.85□□□□□ -1.31
CHMP7-209ENST00000521656 TTLL13PA6NNM8 815 aa6.84□□□□□ -1.31
CHMP7-209ENST00000521656 BRPF1P55201 1214 aaPredicted RBP6.83□□□□□ -1.32
CHMP7-209ENST00000521656 SNPHO15079 494 aa6.82□□□□□ -1.32
CHMP7-209ENST00000521656 KRTAP3-3Q9BYR6 98 aa6.82□□□□□ -1.32
CHMP7-209ENST00000521656 KRTAP3-2Q9BYR7 98 aa6.82□□□□□ -1.32
CHMP7-209ENST00000521656 MAP3K13O43283 966 aa6.8□□□□□ -1.32
CHMP7-209ENST00000521656 TRIM35Q9UPQ4 493 aa6.8□□□□□ -1.32
CHMP7-209ENST00000521656 CCDC9Q9Y3X0 531 aaKnown RBP6.77□□□□□ -1.33
CHMP7-209ENST00000521656 NEUROD2Q15784 382 aa6.76□□□□□ -1.33
CHMP7-209ENST00000521656 EMP3P54852 163 aa6.75□□□□□ -1.33
CHMP7-209ENST00000521656 LMOD2Q6P5Q4 547 aa6.74□□□□□ -1.33
CHMP7-209ENST00000521656 HS3ST6Q96QI5 342 aa6.74□□□□□ -1.33
CHMP7-209ENST00000521656 POTEB3A0JP26 581 aa6.73□□□□□ -1.33
CHMP7-209ENST00000521656 PLCG2P16885 1265 aa6.73□□□□□ -1.33
CHMP7-209ENST00000521656 POTEBQ6S5H4 581 aa6.73□□□□□ -1.33
CHMP7-209ENST00000521656 HS6ST3Q8IZP7 471 aa6.73□□□□□ -1.33
CHMP7-209ENST00000521656 ARID3AQ99856 593 aa6.73□□□□□ -1.33
CHMP7-209ENST00000521656 RSPH6AQ9H0K4 717 aa6.73□□□□□ -1.33
CHMP7-209ENST00000521656 ZBTB7CA1YPR0 619 aa6.72□□□□□ -1.33
CHMP7-209ENST00000521656 P3H3Q8IVL6 736 aa6.71□□□□□ -1.34
CHMP7-209ENST00000521656 ZMYND15Q9H091 742 aa6.71□□□□□ -1.34
CHMP7-209ENST00000521656 FAM205CA6NFA0 338 aa6.7□□□□□ -1.34
CHMP7-209ENST00000521656 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms