RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 IFNLR1Q8IU57 520 aaPredicted RBP9.64□□□□□ -0.87
VPS13B-209ENST00000521559 SPOCK2Q92563 424 aa9.63□□□□□ -0.87
VPS13B-209ENST00000521559 GSE1Q14687 1217 aa9.6□□□□□ -0.87
VPS13B-209ENST00000521559 DCAF8Q5TAQ9 597 aa9.6□□□□□ -0.87
VPS13B-209ENST00000521559 CCDC61Q9Y6R9 512 aa9.6□□□□□ -0.87
VPS13B-209ENST00000521559 PHF12Q96QT6 1004 aa9.58□□□□□ -0.88
VPS13B-209ENST00000521559 KIF12Q96FN5 646 aa9.53□□□□□ -0.88
VPS13B-209ENST00000521559 DCBLD2Q96PD2 775 aa9.52□□□□□ -0.89
VPS13B-209ENST00000521559 SGIP1Q9BQI5 828 aa9.52□□□□□ -0.89
VPS13B-209ENST00000521559 GALR2O43603 387 aaPredicted RBP9.5□□□□□ -0.89
VPS13B-209ENST00000521559 CIZ1Q9ULV3 898 aaPredicted RBP9.5□□□□□ -0.89
VPS13B-209ENST00000521559 MAP3K13O43283 966 aa9.48□□□□□ -0.89
VPS13B-209ENST00000521559 MS4A3Q96HJ5 214 aa9.48□□□□□ -0.89
VPS13B-209ENST00000521559 TRIM41Q8WV44 630 aa9.47□□□□□ -0.89
VPS13B-209ENST00000521559 PCDHB13Q9Y5F0 798 aa9.47□□□□□ -0.89
VPS13B-209ENST00000521559 PYGBP11216 843 aa9.45□□□□□ -0.9
VPS13B-209ENST00000521559 CHRM1P11229 460 aaPredicted RBP9.45□□□□□ -0.9
VPS13B-209ENST00000521559 ZNF467Q7Z7K2 595 aaPredicted RBP9.4□□□□□ -0.9
VPS13B-209ENST00000521559 TIE1P35590 1138 aa9.39□□□□□ -0.91
VPS13B-209ENST00000521559 IFNL1Q8IU54 200 aa9.38□□□□□ -0.91
VPS13B-209ENST00000521559 POTEIP0CG38 1075 aa9.37□□□□□ -0.91
VPS13B-209ENST00000521559 ASTLQ6HA08 431 aaPredicted RBP9.36□□□□□ -0.91
VPS13B-209ENST00000521559 ATMINO43313 823 aaPredicted RBP9.35□□□□□ -0.91
VPS13B-209ENST00000521559 BMP2KQ9NSY1 1161 aaPredicted RBP9.33□□□□□ -0.92
VPS13B-209ENST00000521559 PCDHB8Q9UN66 801 aa9.33□□□□□ -0.92
VPS13B-209ENST00000521559 TTLL13PA6NNM8 815 aa9.31□□□□□ -0.92
VPS13B-209ENST00000521559 SLC39A7Q92504 469 aa9.31□□□□□ -0.92
VPS13B-209ENST00000521559 TRPC6Q9Y210 931 aa9.31□□□□□ -0.92
VPS13B-209ENST00000521559 TMEM106CQ9BVX2 250 aa9.3□□□□□ -0.92
VPS13B-209ENST00000521559 C7P10643 843 aa9.29□□□□□ -0.92
VPS13B-209ENST00000521559 ATN1P54259 1190 aaPredicted RBP9.29□□□□□ -0.92
VPS13B-209ENST00000521559 PDAP1Q13442 181 aaKnown RBP9.29□□□□□ -0.92
VPS13B-209ENST00000521559 TAOK2Q9UL54 1235 aa9.29□□□□□ -0.92
VPS13B-209ENST00000521559 ECM2O94769 699 aaPredicted RBP9.28□□□□□ -0.92
VPS13B-209ENST00000521559 PSEN1P49768 467 aa9.27□□□□□ -0.93
VPS13B-209ENST00000521559 TRIM35Q9UPQ4 493 aa9.26□□□□□ -0.93
VPS13B-209ENST00000521559 RIOK3O14730 519 aaKnown RBP9.25□□□□□ -0.93
VPS13B-209ENST00000521559 PELP1Q8IZL8 1130 aaKnown RBP9.25□□□□□ -0.93
VPS13B-209ENST00000521559 IER5LQ5T953 404 aa9.24□□□□□ -0.93
VPS13B-209ENST00000521559 METRNQ9UJH8 293 aa9.24□□□□□ -0.93
VPS13B-209ENST00000521559 GOLGA2Q08379 1002 aa9.23□□□□□ -0.93
VPS13B-209ENST00000521559 PKD2Q13563 968 aa9.23□□□□□ -0.93
VPS13B-209ENST00000521559 VGFO15240 615 aaPredicted RBP9.22□□□□□ -0.93
VPS13B-209ENST00000521559 LHX8Q68G74 356 aa9.21□□□□□ -0.94
VPS13B-209ENST00000521559 SEC24BO95487 1268 aa9.2□□□□□ -0.94
VPS13B-209ENST00000521559 MKRN3Q13064 507 aaKnown RBP9.19□□□□□ -0.94
VPS13B-209ENST00000521559 RNF25Q96BH1 459 aaPredicted RBP9.17□□□□□ -0.94
VPS13B-209ENST00000521559 PLCG2P16885 1265 aa9.15□□□□□ -0.94
VPS13B-209ENST00000521559 CABP2Q9NPB3 220 aa9.14□□□□□ -0.95
VPS13B-209ENST00000521559 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.13□□□□□ -0.95
VPS13B-209ENST00000521559 RGL2O15211 777 aa9.13□□□□□ -0.95
VPS13B-209ENST00000521559 ZFP91Q96JP5 570 aaPredicted RBP9.13□□□□□ -0.95
VPS13B-209ENST00000521559 OCEL1Q9H607 264 aa9.13□□□□□ -0.95
VPS13B-209ENST00000521559 MAMSTRQ6ZN01 415 aa9.12□□□□□ -0.95
VPS13B-209ENST00000521559 IRX5P78411 483 aaPredicted RBP9.11□□□□□ -0.95
VPS13B-209ENST00000521559 AMER1Q5JTC6 1135 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-209ENST00000521559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.09□□□□□ -0.956e-8■■■■■ 36.8
VPS13B-209ENST00000521559 COLQQ9Y215 455 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-209ENST00000521559 POTEFA5A3E0 1075 aa9.08□□□□□ -0.96
VPS13B-209ENST00000521559 STK25O00506 426 aa9.08□□□□□ -0.96
VPS13B-209ENST00000521559 BCL11BQ9C0K0 894 aaPredicted RBP9.08□□□□□ -0.96
VPS13B-209ENST00000521559 SOX12O15370 315 aa9.07□□□□□ -0.96
VPS13B-209ENST00000521559 STK24Q9Y6E0 443 aa9.07□□□□□ -0.96
VPS13B-209ENST00000521559 POTEB2H3BUK9 544 aa9.06□□□□□ -0.96
VPS13B-209ENST00000521559 SCUBE2Q9NQ36 999 aa9.06□□□□□ -0.96
VPS13B-209ENST00000521559 EFCAB3Q8N7B9 438 aa9.05□□□□□ -0.96
VPS13B-209ENST00000521559 L3MBTL3Q96JM7 780 aaPredicted RBP9.04□□□□□ -0.96
VPS13B-209ENST00000521559 ILDR1Q86SU0 546 aaPredicted RBP9.02□□□□□ -0.97
VPS13B-209ENST00000521559 G3V3G9 751 aa9.01□□□□□ -0.97
VPS13B-209ENST00000521559 PDCD7Q8N8D1 485 aaKnown RBP9.01□□□□□ -0.97
VPS13B-209ENST00000521559 NLRP6P59044 892 aa8.99□□□□□ -0.97
VPS13B-209ENST00000521559 HS6ST3Q8IZP7 471 aa8.99□□□□□ -0.97
VPS13B-209ENST00000521559 OTUD5Q96G74 571 aa8.99□□□□□ -0.97
VPS13B-209ENST00000521559 DCAF8L2P0C7V8 631 aa8.98□□□□□ -0.97
VPS13B-209ENST00000521559 POTEJP0CG39 1038 aa8.98□□□□□ -0.97
VPS13B-209ENST00000521559 CHGAP10645 457 aaKnown RBP8.98□□□□□ -0.97
VPS13B-209ENST00000521559 C3orf67Q6ZVT6 689 aa8.95□□□□□ -0.98
VPS13B-209ENST00000521559 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.95□□□□□ -0.98
VPS13B-209ENST00000521559 PHF8Q9UPP1 1060 aa8.95□□□□□ -0.98
VPS13B-209ENST00000521559 BOLA1Q9Y3E2 137 aa8.94□□□□□ -0.98
VPS13B-209ENST00000521559 RTN4Q9NQC3 1192 aaKnown RBP8.93□□□□□ -0.98
VPS13B-209ENST00000521559 DPY19L2Q6NUT2 758 aa8.92□□□□□ -0.98
VPS13B-209ENST00000521559 RYDENQ9NUL5 291 aaKnown RBP8.92□□□□□ -0.98
VPS13B-209ENST00000521559 DNAJC5Q9H3Z4 198 aa8.91□□□□□ -0.98
VPS13B-209ENST00000521559 SLAIN1Q8ND83 568 aa8.9□□□□□ -0.98
VPS13B-209ENST00000521559 FBXO22Q8NEZ5 403 aa8.9□□□□□ -0.98
VPS13B-209ENST00000521559 MFRPQ9BY79 579 aa8.9□□□□□ -0.98
VPS13B-209ENST00000521559 MS4A4AQ96JQ5 239 aa8.89□□□□□ -0.99
VPS13B-209ENST00000521559 TMEM121BQ9BXQ6 578 aaPredicted RBP8.87□□□□□ -0.99
VPS13B-209ENST00000521559 MICALL2Q8IY33 904 aa8.85□□□□□ -0.99
VPS13B-209ENST00000521559 SNPHO15079 494 aa8.84□□□□□ -0.99
VPS13B-209ENST00000521559 NKX1-1Q15270 411 aaPredicted RBP8.79□□□□□ -1
VPS13B-209ENST00000521559 BBXQ8WY36 941 aaPredicted RBP8.78□□□□□ -1
VPS13B-209ENST00000521559 FAM163AQ96GL9 167 aaPredicted RBP8.76□□□□□ -1.01
VPS13B-209ENST00000521559 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.76□□□□□ -1.01
VPS13B-209ENST00000521559 PPP1R37O75864 691 aa8.75□□□□□ -1.01
VPS13B-209ENST00000521559 GTPBP6O43824 516 aaPredicted RBP8.73□□□□□ -1.01
VPS13B-209ENST00000521559 TMC2Q8TDI7 906 aa8.72□□□□□ -1.01
VPS13B-209ENST00000521559 DOK7Q18PE1 504 aa8.71□□□□□ -1.02
VPS13B-209ENST00000521559 RIMBP2O15034 1052 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms