RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 TSPYL2Q9H2G4 693 aaPredicted RBP15.4■□□□□ 0.06
CLK4-207ENST00000520909 PLCD3Q8N3E9 789 aa15.37■□□□□ 0.05
CLK4-207ENST00000520909 POTEMA6NI47 508 aa15.34■□□□□ 0.05
CLK4-207ENST00000520909 ASTLQ6HA08 431 aaPredicted RBP15.34■□□□□ 0.05
CLK4-207ENST00000520909 MS4A3Q96HJ5 214 aa15.34■□□□□ 0.05
CLK4-207ENST00000520909 METRNQ9UJH8 293 aa15.31■□□□□ 0.04
CLK4-207ENST00000520909 ATMINO43313 823 aaPredicted RBP15.29■□□□□ 0.04
CLK4-207ENST00000520909 POTEGQ6S5H5 508 aa15.28■□□□□ 0.04
CLK4-207ENST00000520909 CCDC61Q9Y6R9 512 aa15.28■□□□□ 0.04
CLK4-207ENST00000520909 ZBTB47Q9UFB7 747 aaPredicted RBP15.26■□□□□ 0.03
CLK4-207ENST00000520909 POTEJP0CG39 1038 aa15.25■□□□□ 0.03
CLK4-207ENST00000520909 C7P10643 843 aa15.25■□□□□ 0.03
CLK4-207ENST00000520909 SLC39A7Q92504 469 aa15.25■□□□□ 0.03
CLK4-207ENST00000520909 RASEFQ8IZ41 740 aa15.22■□□□□ 0.03
CLK4-207ENST00000520909 KIF12Q96FN5 646 aa15.2■□□□□ 0.02
CLK4-207ENST00000520909 MAMSTRQ6ZN01 415 aa15.16■□□□□ 0.02
CLK4-207ENST00000520909 FBXO3Q9UK99 471 aa15.16■□□□□ 0.02
CLK4-207ENST00000520909 ATN1P54259 1190 aaPredicted RBP15.14■□□□□ 0.01
CLK4-207ENST00000520909 MAP3K13O43283 966 aa15.12■□□□□ 0.01
CLK4-207ENST00000520909 NUBP1P53384 320 aa15.11■□□□□ 0.01
CLK4-207ENST00000520909 PCDH10Q9P2E7 1040 aa15.1■□□□□ 0.01
CLK4-207ENST00000520909 LCE2DQ5TA82 110 aaPredicted RBP15.07■□□□□ 0
CLK4-207ENST00000520909 SCUBE2Q9NQ36 999 aa15.05■□□□□ -0
CLK4-207ENST00000520909 FAM212AQ96EL1 285 aa15.04■□□□□ -0
CLK4-207ENST00000520909 BMP2KQ9NSY1 1161 aaPredicted RBP15.04■□□□□ -0
CLK4-207ENST00000520909 POTEFA5A3E0 1075 aa15.03■□□□□ -0
CLK4-207ENST00000520909 TRPC6Q9Y210 931 aa15.03■□□□□ -0
CLK4-207ENST00000520909 SGIP1Q9BQI5 828 aa15.01□□□□□ -0.01
CLK4-207ENST00000520909 TIE1P35590 1138 aa15□□□□□ -0.01
CLK4-207ENST00000520909 FAM163AQ96GL9 167 aaPredicted RBP15□□□□□ -0.01
CLK4-207ENST00000520909 PCDHB13Q9Y5F0 798 aa14.98□□□□□ -0.01
CLK4-207ENST00000520909 DCAF8Q5TAQ9 597 aa14.94□□□□□ -0.02
CLK4-207ENST00000520909 VASPP50552 380 aaPredicted RBP14.92□□□□□ -0.02
CLK4-207ENST00000520909 KLHL34Q8N239 644 aa14.92□□□□□ -0.02
CLK4-207ENST00000520909 TTLL13PA6NNM8 815 aa14.91□□□□□ -0.02
CLK4-207ENST00000520909 IFNL1Q8IU54 200 aa14.89□□□□□ -0.03
CLK4-207ENST00000520909 COLQQ9Y215 455 aaPredicted RBP14.89□□□□□ -0.03
CLK4-207ENST00000520909 SEC24BO95487 1268 aa14.83□□□□□ -0.04
CLK4-207ENST00000520909 TRIM35Q9UPQ4 493 aa14.83□□□□□ -0.04
CLK4-207ENST00000520909 PYGBP11216 843 aa14.82□□□□□ -0.04
CLK4-207ENST00000520909 TMEM106CQ9BVX2 250 aa14.79□□□□□ -0.04
CLK4-207ENST00000520909 GSE1Q14687 1217 aa14.78□□□□□ -0.04
CLK4-207ENST00000520909 IER5LQ5T953 404 aa14.78□□□□□ -0.04
CLK4-207ENST00000520909 PCDHB8Q9UN66 801 aa14.7□□□□□ -0.06
CLK4-207ENST00000520909 CDAN1Q8IWY9 1227 aa14.69□□□□□ -0.06
CLK4-207ENST00000520909 IFNLR1Q8IU57 520 aaPredicted RBP14.65□□□□□ -0.06
CLK4-207ENST00000520909 SLAIN1Q8ND83 568 aa14.65□□□□□ -0.06
CLK4-207ENST00000520909 CHRM1P11229 460 aaPredicted RBP14.64□□□□□ -0.07
CLK4-207ENST00000520909 PLCG2P16885 1265 aa14.64□□□□□ -0.07
CLK4-207ENST00000520909 ZNF467Q7Z7K2 595 aaPredicted RBP14.64□□□□□ -0.07
CLK4-207ENST00000520909 SPOCK2Q92563 424 aa14.64□□□□□ -0.07
CLK4-207ENST00000520909 ST18O60284 1047 aa14.61□□□□□ -0.07
CLK4-207ENST00000520909 IRX5P78411 483 aaPredicted RBP14.58□□□□□ -0.08
CLK4-207ENST00000520909 CIZ1Q9ULV3 898 aaPredicted RBP14.57□□□□□ -0.08
CLK4-207ENST00000520909 OCEL1Q9H607 264 aa14.56□□□□□ -0.08
CLK4-207ENST00000520909 GOLGA2Q08379 1002 aa14.51□□□□□ -0.09
CLK4-207ENST00000520909 PSEN1P49768 467 aa14.49□□□□□ -0.09
CLK4-207ENST00000520909 MKRN3Q13064 507 aaKnown RBP14.47□□□□□ -0.09
CLK4-207ENST00000520909 PDAP1Q13442 181 aaKnown RBP14.44□□□□□ -0.1
CLK4-207ENST00000520909 TMEM121BQ9BXQ6 578 aaPredicted RBP14.41□□□□□ -0.1
CLK4-207ENST00000520909 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.38□□□□□ -0.11
CLK4-207ENST00000520909 TRIM41Q8WV44 630 aa14.37□□□□□ -0.11
CLK4-207ENST00000520909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.37□□□□□ -0.112e-8■■□□□ 11.4
CLK4-207ENST00000520909 SNPHO15079 494 aa14.36□□□□□ -0.11
CLK4-207ENST00000520909 MMRN1Q13201 1228 aa14.36□□□□□ -0.11
CLK4-207ENST00000520909 PDCD7Q8N8D1 485 aaKnown RBP14.36□□□□□ -0.11
CLK4-207ENST00000520909 SPNS2Q8IVW8 549 aa14.35□□□□□ -0.11
CLK4-207ENST00000520909 L3MBTL3Q96JM7 780 aaPredicted RBP14.35□□□□□ -0.11
CLK4-207ENST00000520909 MARVELD3Q96A59 401 aa14.32□□□□□ -0.12
CLK4-207ENST00000520909 CABP2Q9NPB3 220 aa14.31□□□□□ -0.12
CLK4-207ENST00000520909 C3orf67Q6ZVT6 689 aa14.28□□□□□ -0.12
CLK4-207ENST00000520909 ILDR1Q86SU0 546 aaPredicted RBP14.24□□□□□ -0.13
CLK4-207ENST00000520909 G3V3G9 751 aa14.19□□□□□ -0.14
CLK4-207ENST00000520909 DPY19L2Q6NUT2 758 aa14.19□□□□□ -0.14
CLK4-207ENST00000520909 EMP3P54852 163 aa14.16□□□□□ -0.14
CLK4-207ENST00000520909 RIOK3O14730 519 aaKnown RBP14.15□□□□□ -0.14
CLK4-207ENST00000520909 EFCAB3Q8N7B9 438 aa14.14□□□□□ -0.15
CLK4-207ENST00000520909 BOLA1Q9Y3E2 137 aa14.14□□□□□ -0.15
CLK4-207ENST00000520909 POTEB3A0JP26 581 aa14.11□□□□□ -0.15
CLK4-207ENST00000520909 POTEBQ6S5H4 581 aa14.11□□□□□ -0.15
CLK4-207ENST00000520909 KRTAP3-3Q9BYR6 98 aa14.1□□□□□ -0.15
CLK4-207ENST00000520909 KRTAP3-2Q9BYR7 98 aa14.1□□□□□ -0.15
CLK4-207ENST00000520909 VGFO15240 615 aaPredicted RBP14.09□□□□□ -0.15
CLK4-207ENST00000520909 RNF25Q96BH1 459 aaPredicted RBP14.09□□□□□ -0.15
CLK4-207ENST00000520909 HS3ST6Q96QI5 342 aa14.09□□□□□ -0.15
CLK4-207ENST00000520909 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.06□□□□□ -0.16
CLK4-207ENST00000520909 FAM205CA6NFA0 338 aa14.06□□□□□ -0.16
CLK4-207ENST00000520909 ZFP91Q96JP5 570 aaPredicted RBP14.06□□□□□ -0.16
CLK4-207ENST00000520909 SOX12O15370 315 aa14.04□□□□□ -0.16
CLK4-207ENST00000520909 TAOK2Q9UL54 1235 aa14.02□□□□□ -0.17
CLK4-207ENST00000520909 HOXB3P14651 431 aaPredicted RBP13.94□□□□□ -0.18
CLK4-207ENST00000520909 PHF8Q9UPP1 1060 aa13.94□□□□□ -0.18
CLK4-207ENST00000520909 ECM2O94769 699 aaPredicted RBP13.92□□□□□ -0.18
CLK4-207ENST00000520909 MICALL2Q8IY33 904 aa13.91□□□□□ -0.18
CLK4-207ENST00000520909 BCL11BQ9C0K0 894 aaPredicted RBP13.91□□□□□ -0.18
CLK4-207ENST00000520909 MS4A4AQ96JQ5 239 aa13.9□□□□□ -0.18
CLK4-207ENST00000520909 ZNF710Q8N1W2 664 aa13.9□□□□□ -0.19
CLK4-207ENST00000520909 STK24Q9Y6E0 443 aa13.9□□□□□ -0.19
CLK4-207ENST00000520909 NLRP6P59044 892 aa13.89□□□□□ -0.19
CLK4-207ENST00000520909 DOK7Q18PE1 504 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms