RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 CCDC61Q9Y6R9 512 aa14.4□□□□□ -0.1
CTHRC1-204ENST00000520880 NUBP1P53384 320 aa14.39□□□□□ -0.11
CTHRC1-204ENST00000520880 DCBLD2Q96PD2 775 aa14.32□□□□□ -0.12
CTHRC1-204ENST00000520880 MS4A3Q96HJ5 214 aa14.31□□□□□ -0.12
CTHRC1-204ENST00000520880 KIF12Q96FN5 646 aa14.29□□□□□ -0.12
CTHRC1-204ENST00000520880 KLHL34Q8N239 644 aa14.26□□□□□ -0.13
CTHRC1-204ENST00000520880 FAM212AQ96EL1 285 aa14.25□□□□□ -0.13
CTHRC1-204ENST00000520880 MAP3K13O43283 966 aa14.23□□□□□ -0.13
CTHRC1-204ENST00000520880 IFNLR1Q8IU57 520 aaPredicted RBP14.22□□□□□ -0.13
CTHRC1-204ENST00000520880 DCAF8Q5TAQ9 597 aa14.17□□□□□ -0.14
CTHRC1-204ENST00000520880 TRPC6Q9Y210 931 aa14.14□□□□□ -0.15
CTHRC1-204ENST00000520880 PELP1Q8IZL8 1130 aaKnown RBP14.13□□□□□ -0.15
CTHRC1-204ENST00000520880 ASTLQ6HA08 431 aaPredicted RBP14.12□□□□□ -0.15
CTHRC1-204ENST00000520880 ATMINO43313 823 aaPredicted RBP14.11□□□□□ -0.15
CTHRC1-204ENST00000520880 PCDHB13Q9Y5F0 798 aa14.11□□□□□ -0.15
CTHRC1-204ENST00000520880 LHX8Q68G74 356 aa14.1□□□□□ -0.15
CTHRC1-204ENST00000520880 SGIP1Q9BQI5 828 aa14.09□□□□□ -0.15
CTHRC1-204ENST00000520880 PYGBP11216 843 aa14.08□□□□□ -0.16
CTHRC1-204ENST00000520880 SPOCK2Q92563 424 aa14.08□□□□□ -0.16
CTHRC1-204ENST00000520880 IFNL1Q8IU54 200 aa14.06□□□□□ -0.16
CTHRC1-204ENST00000520880 BMP2KQ9NSY1 1161 aaPredicted RBP14.06□□□□□ -0.16
CTHRC1-204ENST00000520880 ATN1P54259 1190 aaPredicted RBP14.05□□□□□ -0.16
CTHRC1-204ENST00000520880 GSE1Q14687 1217 aa14.05□□□□□ -0.16
CTHRC1-204ENST00000520880 TIE1P35590 1138 aa14.03□□□□□ -0.16
CTHRC1-204ENST00000520880 TTLL13PA6NNM8 815 aa13.99□□□□□ -0.17
CTHRC1-204ENST00000520880 METRNQ9UJH8 293 aa13.97□□□□□ -0.17
CTHRC1-204ENST00000520880 SLC39A7Q92504 469 aa13.96□□□□□ -0.17
CTHRC1-204ENST00000520880 CIZ1Q9ULV3 898 aaPredicted RBP13.95□□□□□ -0.18
CTHRC1-204ENST00000520880 PCDHB8Q9UN66 801 aa13.95□□□□□ -0.18
CTHRC1-204ENST00000520880 POTEB2H3BUK9 544 aa13.94□□□□□ -0.18
CTHRC1-204ENST00000520880 C7P10643 843 aa13.94□□□□□ -0.18
CTHRC1-204ENST00000520880 CHRM1P11229 460 aaPredicted RBP13.92□□□□□ -0.18
CTHRC1-204ENST00000520880 TMEM106CQ9BVX2 250 aa13.9□□□□□ -0.18
CTHRC1-204ENST00000520880 TRIM35Q9UPQ4 493 aa13.89□□□□□ -0.19
CTHRC1-204ENST00000520880 POTEFA5A3E0 1075 aa13.85□□□□□ -0.19
CTHRC1-204ENST00000520880 ZNF467Q7Z7K2 595 aaPredicted RBP13.85□□□□□ -0.19
CTHRC1-204ENST00000520880 POTEJP0CG39 1038 aa13.8□□□□□ -0.2
CTHRC1-204ENST00000520880 OTUD5Q96G74 571 aa13.8□□□□□ -0.2
CTHRC1-204ENST00000520880 COLQQ9Y215 455 aaPredicted RBP13.8□□□□□ -0.2
CTHRC1-204ENST00000520880 IER5LQ5T953 404 aa13.79□□□□□ -0.2
CTHRC1-204ENST00000520880 SEC24BO95487 1268 aa13.76□□□□□ -0.21
CTHRC1-204ENST00000520880 PSEN1P49768 467 aa13.74□□□□□ -0.21
CTHRC1-204ENST00000520880 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
CTHRC1-204ENST00000520880 PDAP1Q13442 181 aaKnown RBP13.71□□□□□ -0.21
CTHRC1-204ENST00000520880 IRX5P78411 483 aaPredicted RBP13.69□□□□□ -0.22
CTHRC1-204ENST00000520880 PLCG2P16885 1265 aa13.65□□□□□ -0.22
CTHRC1-204ENST00000520880 RNF25Q96BH1 459 aaPredicted RBP13.65□□□□□ -0.22
CTHRC1-204ENST00000520880 MAMSTRQ6ZN01 415 aa13.64□□□□□ -0.23
CTHRC1-204ENST00000520880 OCEL1Q9H607 264 aa13.62□□□□□ -0.23
CTHRC1-204ENST00000520880 GOLGA2Q08379 1002 aa13.61□□□□□ -0.23
CTHRC1-204ENST00000520880 SCUBE2Q9NQ36 999 aa13.6□□□□□ -0.23
CTHRC1-204ENST00000520880 RIOK3O14730 519 aaKnown RBP13.59□□□□□ -0.23
CTHRC1-204ENST00000520880 MKRN3Q13064 507 aaKnown RBP13.59□□□□□ -0.23
CTHRC1-204ENST00000520880 CABP2Q9NPB3 220 aa13.58□□□□□ -0.24
CTHRC1-204ENST00000520880 PKD2Q13563 968 aa13.55□□□□□ -0.24
CTHRC1-204ENST00000520880 PDCD7Q8N8D1 485 aaKnown RBP13.55□□□□□ -0.24
CTHRC1-204ENST00000520880 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.53□□□□□ -0.24
CTHRC1-204ENST00000520880 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.51□□□□□ -0.25
CTHRC1-204ENST00000520880 ECM2O94769 699 aaPredicted RBP13.51□□□□□ -0.25
CTHRC1-204ENST00000520880 ZFP91Q96JP5 570 aaPredicted RBP13.51□□□□□ -0.25
CTHRC1-204ENST00000520880 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
CTHRC1-204ENST00000520880 ILDR1Q86SU0 546 aaPredicted RBP13.5□□□□□ -0.25
CTHRC1-204ENST00000520880 EFCAB3Q8N7B9 438 aa13.47□□□□□ -0.25
CTHRC1-204ENST00000520880 RGL2O15211 777 aa13.43□□□□□ -0.26
CTHRC1-204ENST00000520880 DPY19L2Q6NUT2 758 aa13.43□□□□□ -0.26
CTHRC1-204ENST00000520880 SLAIN1Q8ND83 568 aa13.41□□□□□ -0.26
CTHRC1-204ENST00000520880 L3MBTL3Q96JM7 780 aaPredicted RBP13.39□□□□□ -0.27
CTHRC1-204ENST00000520880 BCL11BQ9C0K0 894 aaPredicted RBP13.37□□□□□ -0.27
CTHRC1-204ENST00000520880 TAOK2Q9UL54 1235 aa13.37□□□□□ -0.27
CTHRC1-204ENST00000520880 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.36□□□□□ -0.27
CTHRC1-204ENST00000520880 LCE2DQ5TA82 110 aaPredicted RBP13.34□□□□□ -0.27
CTHRC1-204ENST00000520880 STK24Q9Y6E0 443 aa13.34□□□□□ -0.27
CTHRC1-204ENST00000520880 SOX12O15370 315 aa13.33□□□□□ -0.28
CTHRC1-204ENST00000520880 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.28
CTHRC1-204ENST00000520880 STK25O00506 426 aa13.32□□□□□ -0.28
CTHRC1-204ENST00000520880 FAM163AQ96GL9 167 aaPredicted RBP13.32□□□□□ -0.28
CTHRC1-204ENST00000520880 PHF8Q9UPP1 1060 aa13.31□□□□□ -0.28
CTHRC1-204ENST00000520880 BOLA1Q9Y3E2 137 aa13.3□□□□□ -0.28
CTHRC1-204ENST00000520880 MS4A4AQ96JQ5 239 aa13.29□□□□□ -0.28
CTHRC1-204ENST00000520880 POTEMA6NI47 508 aa13.26□□□□□ -0.29
CTHRC1-204ENST00000520880 G3V3G9 751 aa13.25□□□□□ -0.29
CTHRC1-204ENST00000520880 POTEGQ6S5H5 508 aa13.24□□□□□ -0.29
CTHRC1-204ENST00000520880 TMEM121BQ9BXQ6 578 aaPredicted RBP13.24□□□□□ -0.29
CTHRC1-204ENST00000520880 FBXO22Q8NEZ5 403 aa13.23□□□□□ -0.29
CTHRC1-204ENST00000520880 MFRPQ9BY79 579 aa13.22□□□□□ -0.29
CTHRC1-204ENST00000520880 NLRP6P59044 892 aa13.21□□□□□ -0.29
CTHRC1-204ENST00000520880 MICALL2Q8IY33 904 aa13.2□□□□□ -0.3
CTHRC1-204ENST00000520880 ST18O60284 1047 aa13.18□□□□□ -0.3
CTHRC1-204ENST00000520880 SNPHO15079 494 aa13.14□□□□□ -0.31
CTHRC1-204ENST00000520880 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
CTHRC1-204ENST00000520880 TMEM92Q6UXU6 159 aa13.11□□□□□ -0.31
CTHRC1-204ENST00000520880 CHGAP10645 457 aaKnown RBP13.09□□□□□ -0.31
CTHRC1-204ENST00000520880 HOXB3P14651 431 aaPredicted RBP13.04□□□□□ -0.32
CTHRC1-204ENST00000520880 PPP1R37O75864 691 aa13.02□□□□□ -0.33
CTHRC1-204ENST00000520880 MARVELD3Q96A59 401 aa13.01□□□□□ -0.33
CTHRC1-204ENST00000520880 NKX1-1Q15270 411 aaPredicted RBP12.98□□□□□ -0.33
CTHRC1-204ENST00000520880 DNAJC5Q9H3Z4 198 aa12.98□□□□□ -0.33
CTHRC1-204ENST00000520880 PCDH10Q9P2E7 1040 aa12.98□□□□□ -0.33
CTHRC1-204ENST00000520880 DOK7Q18PE1 504 aa12.95□□□□□ -0.34
CTHRC1-204ENST00000520880 DCAF8L2P0C7V8 631 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms