RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 POTEIP0CG38 1075 aa15.28■□□□□ 0.04
LINC00535-204ENST00000520513 ZBTB47Q9UFB7 747 aaPredicted RBP15.28■□□□□ 0.04
LINC00535-204ENST00000520513 IFNLR1Q8IU57 520 aaPredicted RBP15.2■□□□□ 0.02
LINC00535-204ENST00000520513 MS4A3Q96HJ5 214 aa15.17■□□□□ 0.02
LINC00535-204ENST00000520513 KIF12Q96FN5 646 aa15.15■□□□□ 0.02
LINC00535-204ENST00000520513 KLHL34Q8N239 644 aa15.12■□□□□ 0.01
LINC00535-204ENST00000520513 MAP3K13O43283 966 aa15.1■□□□□ 0.01
LINC00535-204ENST00000520513 DCBLD2Q96PD2 775 aa15.1■□□□□ 0.01
LINC00535-204ENST00000520513 FAM212AQ96EL1 285 aa15.07■□□□□ 0
LINC00535-204ENST00000520513 TRPC6Q9Y210 931 aa15.07■□□□□ 0
LINC00535-204ENST00000520513 DCAF8Q5TAQ9 597 aa15.03■□□□□ -0
LINC00535-204ENST00000520513 PELP1Q8IZL8 1130 aaKnown RBP15.01□□□□□ -0.01
LINC00535-204ENST00000520513 SPOCK2Q92563 424 aa14.97□□□□□ -0.01
LINC00535-204ENST00000520513 PYGBP11216 843 aa14.96□□□□□ -0.01
LINC00535-204ENST00000520513 ATMINO43313 823 aaPredicted RBP14.94□□□□□ -0.02
LINC00535-204ENST00000520513 ASTLQ6HA08 431 aaPredicted RBP14.94□□□□□ -0.02
LINC00535-204ENST00000520513 IFNL1Q8IU54 200 aa14.94□□□□□ -0.02
LINC00535-204ENST00000520513 PCDHB13Q9Y5F0 798 aa14.94□□□□□ -0.02
LINC00535-204ENST00000520513 BMP2KQ9NSY1 1161 aaPredicted RBP14.91□□□□□ -0.02
LINC00535-204ENST00000520513 SGIP1Q9BQI5 828 aa14.9□□□□□ -0.02
LINC00535-204ENST00000520513 ATN1P54259 1190 aaPredicted RBP14.89□□□□□ -0.03
LINC00535-204ENST00000520513 GSE1Q14687 1217 aa14.87□□□□□ -0.03
LINC00535-204ENST00000520513 LHX8Q68G74 356 aa14.87□□□□□ -0.03
LINC00535-204ENST00000520513 PCDHB8Q9UN66 801 aa14.84□□□□□ -0.03
LINC00535-204ENST00000520513 TIE1P35590 1138 aa14.83□□□□□ -0.04
LINC00535-204ENST00000520513 TTLL13PA6NNM8 815 aa14.82□□□□□ -0.04
LINC00535-204ENST00000520513 CIZ1Q9ULV3 898 aaPredicted RBP14.82□□□□□ -0.04
LINC00535-204ENST00000520513 POTEB2H3BUK9 544 aa14.81□□□□□ -0.04
LINC00535-204ENST00000520513 CHRM1P11229 460 aaPredicted RBP14.79□□□□□ -0.04
LINC00535-204ENST00000520513 METRNQ9UJH8 293 aa14.75□□□□□ -0.05
LINC00535-204ENST00000520513 POTEFA5A3E0 1075 aa14.74□□□□□ -0.05
LINC00535-204ENST00000520513 SLC39A7Q92504 469 aa14.74□□□□□ -0.05
LINC00535-204ENST00000520513 TMEM106CQ9BVX2 250 aa14.72□□□□□ -0.05
LINC00535-204ENST00000520513 C7P10643 843 aa14.71□□□□□ -0.05
LINC00535-204ENST00000520513 TRIM35Q9UPQ4 493 aa14.7□□□□□ -0.06
LINC00535-204ENST00000520513 POTEJP0CG39 1038 aa14.68□□□□□ -0.06
LINC00535-204ENST00000520513 ZNF467Q7Z7K2 595 aaPredicted RBP14.65□□□□□ -0.06
LINC00535-204ENST00000520513 COLQQ9Y215 455 aaPredicted RBP14.65□□□□□ -0.06
LINC00535-204ENST00000520513 RNF25Q96BH1 459 aaPredicted RBP14.61□□□□□ -0.07
LINC00535-204ENST00000520513 OTUD5Q96G74 571 aa14.59□□□□□ -0.07
LINC00535-204ENST00000520513 PSEN1P49768 467 aa14.58□□□□□ -0.08
LINC00535-204ENST00000520513 IER5LQ5T953 404 aa14.57□□□□□ -0.08
LINC00535-204ENST00000520513 TRIM41Q8WV44 630 aa14.54□□□□□ -0.08
LINC00535-204ENST00000520513 PDAP1Q13442 181 aaKnown RBP14.53□□□□□ -0.08
LINC00535-204ENST00000520513 PKD2Q13563 968 aa14.53□□□□□ -0.08
LINC00535-204ENST00000520513 IRX5P78411 483 aaPredicted RBP14.52□□□□□ -0.09
LINC00535-204ENST00000520513 SEC24BO95487 1268 aa14.48□□□□□ -0.09
LINC00535-204ENST00000520513 RIOK3O14730 519 aaKnown RBP14.44□□□□□ -0.1
LINC00535-204ENST00000520513 MAMSTRQ6ZN01 415 aa14.44□□□□□ -0.1
LINC00535-204ENST00000520513 CABP2Q9NPB3 220 aa14.42□□□□□ -0.1
LINC00535-204ENST00000520513 PDCD7Q8N8D1 485 aaKnown RBP14.41□□□□□ -0.1
LINC00535-204ENST00000520513 ECM2O94769 699 aaPredicted RBP14.4□□□□□ -0.1
LINC00535-204ENST00000520513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.39□□□□□ -0.11
LINC00535-204ENST00000520513 PLCG2P16885 1265 aa14.39□□□□□ -0.11
LINC00535-204ENST00000520513 ZFP91Q96JP5 570 aaPredicted RBP14.39□□□□□ -0.11
LINC00535-204ENST00000520513 OCEL1Q9H607 264 aa14.39□□□□□ -0.11
LINC00535-204ENST00000520513 RGL2O15211 777 aa14.38□□□□□ -0.11
LINC00535-204ENST00000520513 SCUBE2Q9NQ36 999 aa14.38□□□□□ -0.11
LINC00535-204ENST00000520513 GOLGA2Q08379 1002 aa14.36□□□□□ -0.11
LINC00535-204ENST00000520513 ILDR1Q86SU0 546 aaPredicted RBP14.36□□□□□ -0.11
LINC00535-204ENST00000520513 MKRN3Q13064 507 aaKnown RBP14.35□□□□□ -0.11
LINC00535-204ENST00000520513 VGFO15240 615 aaPredicted RBP14.34□□□□□ -0.11
LINC00535-204ENST00000520513 EFCAB3Q8N7B9 438 aa14.32□□□□□ -0.12
LINC00535-204ENST00000520513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.32□□□□□ -0.12
LINC00535-204ENST00000520513 DPY19L2Q6NUT2 758 aa14.31□□□□□ -0.12
LINC00535-204ENST00000520513 BCL11BQ9C0K0 894 aaPredicted RBP14.24□□□□□ -0.13
LINC00535-204ENST00000520513 MS4A4AQ96JQ5 239 aa14.19□□□□□ -0.14
LINC00535-204ENST00000520513 TAOK2Q9UL54 1235 aa14.17□□□□□ -0.14
LINC00535-204ENST00000520513 PHF8Q9UPP1 1060 aa14.17□□□□□ -0.14
LINC00535-204ENST00000520513 STK24Q9Y6E0 443 aa14.17□□□□□ -0.14
LINC00535-204ENST00000520513 STK25O00506 426 aa14.16□□□□□ -0.14
LINC00535-204ENST00000520513 LCE2DQ5TA82 110 aaPredicted RBP14.16□□□□□ -0.14
LINC00535-204ENST00000520513 SLAIN1Q8ND83 568 aa14.15□□□□□ -0.14
LINC00535-204ENST00000520513 L3MBTL3Q96JM7 780 aaPredicted RBP14.14□□□□□ -0.15
LINC00535-204ENST00000520513 SOX12O15370 315 aa14.12□□□□□ -0.15
LINC00535-204ENST00000520513 FBXO22Q8NEZ5 403 aa14.11□□□□□ -0.15
LINC00535-204ENST00000520513 MFRPQ9BY79 579 aa14.1□□□□□ -0.15
LINC00535-204ENST00000520513 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.09□□□□□ -0.15
LINC00535-204ENST00000520513 BOLA1Q9Y3E2 137 aa14.08□□□□□ -0.16
LINC00535-204ENST00000520513 TMEM121BQ9BXQ6 578 aaPredicted RBP14.07□□□□□ -0.16
LINC00535-204ENST00000520513 C3orf67Q6ZVT6 689 aa14.06□□□□□ -0.16
LINC00535-204ENST00000520513 FAM163AQ96GL9 167 aaPredicted RBP14.04□□□□□ -0.16
LINC00535-204ENST00000520513 MICALL2Q8IY33 904 aa14.01□□□□□ -0.17
LINC00535-204ENST00000520513 G3V3G9 751 aa14□□□□□ -0.17
LINC00535-204ENST00000520513 NLRP6P59044 892 aa14□□□□□ -0.17
LINC00535-204ENST00000520513 HS6ST3Q8IZP7 471 aa14□□□□□ -0.17
LINC00535-204ENST00000520513 TMEM92Q6UXU6 159 aa13.99□□□□□ -0.17
LINC00535-204ENST00000520513 POTEMA6NI47 508 aa13.97□□□□□ -0.17
LINC00535-204ENST00000520513 CHGAP10645 457 aaKnown RBP13.96□□□□□ -0.17
LINC00535-204ENST00000520513 POTEGQ6S5H5 508 aa13.95□□□□□ -0.18
LINC00535-204ENST00000520513 ST18O60284 1047 aa13.93□□□□□ -0.18
LINC00535-204ENST00000520513 NKX1-1Q15270 411 aaPredicted RBP13.93□□□□□ -0.18
LINC00535-204ENST00000520513 SNPHO15079 494 aa13.92□□□□□ -0.18
LINC00535-204ENST00000520513 PPP1R37O75864 691 aa13.92□□□□□ -0.18
LINC00535-204ENST00000520513 DNAJC5Q9H3Z4 198 aa13.86□□□□□ -0.19
LINC00535-204ENST00000520513 HOXB3P14651 431 aaPredicted RBP13.85□□□□□ -0.19
LINC00535-204ENST00000520513 RTN4Q9NQC3 1192 aaKnown RBP13.84□□□□□ -0.19
LINC00535-204ENST00000520513 PCDH10Q9P2E7 1040 aa13.8□□□□□ -0.2
LINC00535-204ENST00000520513 DCAF8L2P0C7V8 631 aa13.77□□□□□ -0.21
LINC00535-204ENST00000520513 MARVELD3Q96A59 401 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms