RNA–Protein interactions for RNA: ENST00000520122.1

AP3B1-206, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 3

Gene AP3B1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-206ENST00000520122 FKBP8Q14318 412 aa15.5■□□□□ 0.07
AP3B1-206ENST00000520122 ASTLQ6HA08 431 aaPredicted RBP15.5■□□□□ 0.07
AP3B1-206ENST00000520122 ATMINO43313 823 aaPredicted RBP15.48■□□□□ 0.07
AP3B1-206ENST00000520122 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
AP3B1-206ENST00000520122 RASEFQ8IZ41 740 aa15.46■□□□□ 0.07
AP3B1-206ENST00000520122 SLC39A7Q92504 469 aa15.46■□□□□ 0.07
AP3B1-206ENST00000520122 KIF12Q96FN5 646 aa15.46■□□□□ 0.07
AP3B1-206ENST00000520122 METRNQ9UJH8 293 aa15.46■□□□□ 0.07
AP3B1-206ENST00000520122 POTEB2H3BUK9 544 aa15.44■□□□□ 0.06
AP3B1-206ENST00000520122 C7P10643 843 aa15.43■□□□□ 0.06
AP3B1-206ENST00000520122 OTUD5Q96G74 571 aa15.42■□□□□ 0.06
AP3B1-206ENST00000520122 MAP3K13O43283 966 aa15.39■□□□□ 0.05
AP3B1-206ENST00000520122 ATN1P54259 1190 aaPredicted RBP15.37■□□□□ 0.05
AP3B1-206ENST00000520122 BMP2KQ9NSY1 1161 aaPredicted RBP15.32■□□□□ 0.04
AP3B1-206ENST00000520122 TIE1P35590 1138 aa15.3■□□□□ 0.04
AP3B1-206ENST00000520122 TRPC6Q9Y210 931 aa15.3■□□□□ 0.04
AP3B1-206ENST00000520122 NUBP1P53384 320 aa15.28■□□□□ 0.04
AP3B1-206ENST00000520122 MAMSTRQ6ZN01 415 aa15.28■□□□□ 0.04
AP3B1-206ENST00000520122 FAM212AQ96EL1 285 aa15.28■□□□□ 0.04
AP3B1-206ENST00000520122 PCDHB13Q9Y5F0 798 aa15.27■□□□□ 0.04
AP3B1-206ENST00000520122 FBXO3Q9UK99 471 aa15.25■□□□□ 0.03
AP3B1-206ENST00000520122 SGIP1Q9BQI5 828 aa15.24■□□□□ 0.03
AP3B1-206ENST00000520122 SCUBE2Q9NQ36 999 aa15.21■□□□□ 0.03
AP3B1-206ENST00000520122 TTLL13PA6NNM8 815 aa15.2■□□□□ 0.02
AP3B1-206ENST00000520122 SEC24BO95487 1268 aa15.2■□□□□ 0.02
AP3B1-206ENST00000520122 POTEJP0CG39 1038 aa15.19■□□□□ 0.02
AP3B1-206ENST00000520122 DCAF8Q5TAQ9 597 aa15.16■□□□□ 0.02
AP3B1-206ENST00000520122 PLSCR2Q9NRY7 297 aa15.14■□□□□ 0.01
AP3B1-206ENST00000520122 IFNL1Q8IU54 200 aa15.13■□□□□ 0.01
AP3B1-206ENST00000520122 TRIM35Q9UPQ4 493 aa15.13■□□□□ 0.01
AP3B1-206ENST00000520122 POTEFA5A3E0 1075 aa15.11■□□□□ 0.01
AP3B1-206ENST00000520122 POTEMA6NI47 508 aa15.1■□□□□ 0.01
AP3B1-206ENST00000520122 KLHL34Q8N239 644 aa15.08■□□□□ 0
AP3B1-206ENST00000520122 TMEM106CQ9BVX2 250 aa15.08■□□□□ 0
AP3B1-206ENST00000520122 IER5LQ5T953 404 aa15.07■□□□□ 0
AP3B1-206ENST00000520122 COLQQ9Y215 455 aaPredicted RBP15.07■□□□□ 0
AP3B1-206ENST00000520122 POTEGQ6S5H5 508 aa15.06■□□□□ 0
AP3B1-206ENST00000520122 PYGBP11216 843 aa15.04■□□□□ -0
AP3B1-206ENST00000520122 FAM163AQ96GL9 167 aaPredicted RBP15.02■□□□□ -0
AP3B1-206ENST00000520122 VASPP50552 380 aaPredicted RBP15□□□□□ -0.01
AP3B1-206ENST00000520122 PLCG2P16885 1265 aa14.97□□□□□ -0.01
AP3B1-206ENST00000520122 GSE1Q14687 1217 aa14.94□□□□□ -0.02
AP3B1-206ENST00000520122 PCDHB8Q9UN66 801 aa14.93□□□□□ -0.02
AP3B1-206ENST00000520122 PCDH10Q9P2E7 1040 aa14.87□□□□□ -0.03
AP3B1-206ENST00000520122 SLAIN1Q8ND83 568 aa14.86□□□□□ -0.03
AP3B1-206ENST00000520122 ZNF467Q7Z7K2 595 aaPredicted RBP14.85□□□□□ -0.03
AP3B1-206ENST00000520122 IRX5P78411 483 aaPredicted RBP14.84□□□□□ -0.03
AP3B1-206ENST00000520122 OCEL1Q9H607 264 aa14.84□□□□□ -0.03
AP3B1-206ENST00000520122 LCE2DQ5TA82 110 aaPredicted RBP14.83□□□□□ -0.04
AP3B1-206ENST00000520122 GOLGA2Q08379 1002 aa14.82□□□□□ -0.04
AP3B1-206ENST00000520122 CHRM1P11229 460 aaPredicted RBP14.75□□□□□ -0.05
AP3B1-206ENST00000520122 MKRN3Q13064 507 aaKnown RBP14.74□□□□□ -0.05
AP3B1-206ENST00000520122 SPOCK2Q92563 424 aa14.74□□□□□ -0.05
AP3B1-206ENST00000520122 CIZ1Q9ULV3 898 aaPredicted RBP14.74□□□□□ -0.05
AP3B1-206ENST00000520122 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.72□□□□□ -0.05
AP3B1-206ENST00000520122 PSEN1P49768 467 aa14.7□□□□□ -0.06
AP3B1-206ENST00000520122 IFNLR1Q8IU57 520 aaPredicted RBP14.69□□□□□ -0.06
AP3B1-206ENST00000520122 ST18O60284 1047 aa14.65□□□□□ -0.06
AP3B1-206ENST00000520122 SNPHO15079 494 aa14.63□□□□□ -0.07
AP3B1-206ENST00000520122 PDAP1Q13442 181 aaKnown RBP14.63□□□□□ -0.07
AP3B1-206ENST00000520122 C3orf67Q6ZVT6 689 aa14.63□□□□□ -0.07
AP3B1-206ENST00000520122 L3MBTL3Q96JM7 780 aaPredicted RBP14.63□□□□□ -0.07
AP3B1-206ENST00000520122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.63□□□□□ -0.07
AP3B1-206ENST00000520122 PDCD7Q8N8D1 485 aaKnown RBP14.61□□□□□ -0.07
AP3B1-206ENST00000520122 CDAN1Q8IWY9 1227 aa14.6□□□□□ -0.07
AP3B1-206ENST00000520122 CABP2Q9NPB3 220 aa14.54□□□□□ -0.08
AP3B1-206ENST00000520122 G3V3G9 751 aa14.52□□□□□ -0.09
AP3B1-206ENST00000520122 TMEM121BQ9BXQ6 578 aaPredicted RBP14.52□□□□□ -0.09
AP3B1-206ENST00000520122 TRIM41Q8WV44 630 aa14.48□□□□□ -0.09
AP3B1-206ENST00000520122 MARVELD3Q96A59 401 aa14.43□□□□□ -0.1
AP3B1-206ENST00000520122 DPY19L2Q6NUT2 758 aa14.42□□□□□ -0.1
AP3B1-206ENST00000520122 ILDR1Q86SU0 546 aaPredicted RBP14.4□□□□□ -0.1
AP3B1-206ENST00000520122 BOLA1Q9Y3E2 137 aa14.39□□□□□ -0.11
AP3B1-206ENST00000520122 EMP3P54852 163 aa14.35□□□□□ -0.11
AP3B1-206ENST00000520122 EFCAB3Q8N7B9 438 aa14.33□□□□□ -0.12
AP3B1-206ENST00000520122 RIOK3O14730 519 aaKnown RBP14.28□□□□□ -0.12
AP3B1-206ENST00000520122 FAM205CA6NFA0 338 aa14.24□□□□□ -0.13
AP3B1-206ENST00000520122 ZNF710Q8N1W2 664 aa14.24□□□□□ -0.13
AP3B1-206ENST00000520122 VGFO15240 615 aaPredicted RBP14.22□□□□□ -0.13
AP3B1-206ENST00000520122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.21□□□□□ -0.13
AP3B1-206ENST00000520122 SPNS2Q8IVW8 549 aa14.21□□□□□ -0.13
AP3B1-206ENST00000520122 ZFP91Q96JP5 570 aaPredicted RBP14.21□□□□□ -0.13
AP3B1-206ENST00000520122 HS3ST6Q96QI5 342 aa14.21□□□□□ -0.13
AP3B1-206ENST00000520122 SOX12O15370 315 aa14.2□□□□□ -0.14
AP3B1-206ENST00000520122 DOK7Q18PE1 504 aa14.19□□□□□ -0.14
AP3B1-206ENST00000520122 RNF25Q96BH1 459 aaPredicted RBP14.19□□□□□ -0.14
AP3B1-206ENST00000520122 MMRN1Q13201 1228 aa14.18□□□□□ -0.14
AP3B1-206ENST00000520122 HOXB3P14651 431 aaPredicted RBP14.16□□□□□ -0.14
AP3B1-206ENST00000520122 RIMBP2O15034 1052 aa14.15□□□□□ -0.14
AP3B1-206ENST00000520122 TAOK2Q9UL54 1235 aa14.15□□□□□ -0.14
AP3B1-206ENST00000520122 MICALL2Q8IY33 904 aa14.14□□□□□ -0.15
AP3B1-206ENST00000520122 PHF8Q9UPP1 1060 aa14.12□□□□□ -0.15
AP3B1-206ENST00000520122 POTEB3A0JP26 581 aa14.11□□□□□ -0.15
AP3B1-206ENST00000520122 HOXB1P14653 301 aaPredicted RBP14.11□□□□□ -0.15
AP3B1-206ENST00000520122 POTEBQ6S5H4 581 aa14.11□□□□□ -0.15
AP3B1-206ENST00000520122 ERBB3P21860 1342 aa14.09□□□□□ -0.15
AP3B1-206ENST00000520122 MS4A4AQ96JQ5 239 aa14.06□□□□□ -0.16
AP3B1-206ENST00000520122 NLRP6P59044 892 aa14.05□□□□□ -0.16
AP3B1-206ENST00000520122 KRTAP3-3Q9BYR6 98 aa14.05□□□□□ -0.16
AP3B1-206ENST00000520122 KRTAP3-2Q9BYR7 98 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms