RNA–Protein interactions for RNA: ENST00000519929.1

LINC02143-201, Transcript of long intergenic non-protein coding RNA 2143, humanhuman

TSL 3 BASIC

Gene LINC02143, Length 520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02143-201ENST00000519929 CD44P16070 742 aaKnown RBP12.76□□□□□ -0.37
LINC02143-201ENST00000519929 CCDC61Q9Y6R9 512 aa12.76□□□□□ -0.37
LINC02143-201ENST00000519929 EVX2Q03828 476 aa12.72□□□□□ -0.37
LINC02143-201ENST00000519929 RGL2O15211 777 aa12.71□□□□□ -0.37
LINC02143-201ENST00000519929 PYGBP11216 843 aa12.7□□□□□ -0.38
LINC02143-201ENST00000519929 CHRM1P11229 460 aaPredicted RBP12.7□□□□□ -0.38
LINC02143-201ENST00000519929 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
LINC02143-201ENST00000519929 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
LINC02143-201ENST00000519929 RNF25Q96BH1 459 aaPredicted RBP12.69□□□□□ -0.38
LINC02143-201ENST00000519929 HAX1O00165 279 aa12.67□□□□□ -0.38
LINC02143-201ENST00000519929 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
LINC02143-201ENST00000519929 PHF12Q96QT6 1004 aa12.64□□□□□ -0.39
LINC02143-201ENST00000519929 KIF12Q96FN5 646 aa12.63□□□□□ -0.39
LINC02143-201ENST00000519929 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
LINC02143-201ENST00000519929 MAP3K13O43283 966 aa12.59□□□□□ -0.39
LINC02143-201ENST00000519929 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
LINC02143-201ENST00000519929 PCDHB8Q9UN66 801 aa12.54□□□□□ -0.4
LINC02143-201ENST00000519929 PCDHB13Q9Y5F0 798 aa12.54□□□□□ -0.4
LINC02143-201ENST00000519929 IFNL1Q8IU54 200 aa12.53□□□□□ -0.4
LINC02143-201ENST00000519929 SGIP1Q9BQI5 828 aa12.51□□□□□ -0.41
LINC02143-201ENST00000519929 DCAF8L2P0C7V8 631 aa12.5□□□□□ -0.41
LINC02143-201ENST00000519929 MS4A3Q96HJ5 214 aa12.49□□□□□ -0.41
LINC02143-201ENST00000519929 ZNF467Q7Z7K2 595 aaPredicted RBP12.48□□□□□ -0.41
LINC02143-201ENST00000519929 TRPC6Q9Y210 931 aa12.46□□□□□ -0.41
LINC02143-201ENST00000519929 VGFO15240 615 aaPredicted RBP12.45□□□□□ -0.42
LINC02143-201ENST00000519929 GALR2O43603 387 aaPredicted RBP12.44□□□□□ -0.42
LINC02143-201ENST00000519929 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.43□□□□□ -0.42
LINC02143-201ENST00000519929 ZFP91Q96JP5 570 aaPredicted RBP12.43□□□□□ -0.42
LINC02143-201ENST00000519929 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
LINC02143-201ENST00000519929 GABBR2O75899 941 aa12.4□□□□□ -0.42
LINC02143-201ENST00000519929 PDAP1Q13442 181 aaKnown RBP12.4□□□□□ -0.42
LINC02143-201ENST00000519929 HS6ST3Q8IZP7 471 aa12.4□□□□□ -0.42
LINC02143-201ENST00000519929 PSEN1P49768 467 aa12.39□□□□□ -0.43
LINC02143-201ENST00000519929 CLCN6P51797 869 aa12.36□□□□□ -0.43
LINC02143-201ENST00000519929 TAOK2Q9UL54 1235 aa12.36□□□□□ -0.43
LINC02143-201ENST00000519929 STK25O00506 426 aa12.35□□□□□ -0.43
LINC02143-201ENST00000519929 BCL11BQ9C0K0 894 aaPredicted RBP12.35□□□□□ -0.43
LINC02143-201ENST00000519929 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
LINC02143-201ENST00000519929 DNAJC5Q9H3Z4 198 aa12.32□□□□□ -0.44
LINC02143-201ENST00000519929 STK24Q9Y6E0 443 aa12.32□□□□□ -0.44
LINC02143-201ENST00000519929 BMP2KQ9NSY1 1161 aaPredicted RBP12.31□□□□□ -0.44
LINC02143-201ENST00000519929 NKX1-1Q15270 411 aaPredicted RBP12.3□□□□□ -0.44
LINC02143-201ENST00000519929 TIE1P35590 1138 aa12.29□□□□□ -0.44
LINC02143-201ENST00000519929 BBXQ8WY36 941 aaPredicted RBP12.29□□□□□ -0.44
LINC02143-201ENST00000519929 TMEM106CQ9BVX2 250 aa12.29□□□□□ -0.44
LINC02143-201ENST00000519929 TTLL13PA6NNM8 815 aa12.28□□□□□ -0.44
LINC02143-201ENST00000519929 ATMINO43313 823 aaPredicted RBP12.23□□□□□ -0.45
LINC02143-201ENST00000519929 CABP2Q9NPB3 220 aa12.23□□□□□ -0.45
LINC02143-201ENST00000519929 POTEIP0CG38 1075 aa12.22□□□□□ -0.45
LINC02143-201ENST00000519929 ATN1P54259 1190 aaPredicted RBP12.22□□□□□ -0.45
LINC02143-201ENST00000519929 ASTLQ6HA08 431 aaPredicted RBP12.22□□□□□ -0.45
LINC02143-201ENST00000519929 EFCAB3Q8N7B9 438 aa12.21□□□□□ -0.45
LINC02143-201ENST00000519929 PELP1Q8IZL8 1130 aaKnown RBP12.18□□□□□ -0.46
LINC02143-201ENST00000519929 TRIM35Q9UPQ4 493 aa12.18□□□□□ -0.46
LINC02143-201ENST00000519929 GTPBP6O43824 516 aaPredicted RBP12.16□□□□□ -0.46
LINC02143-201ENST00000519929 PLCB2Q00722 1185 aa12.16□□□□□ -0.46
LINC02143-201ENST00000519929 MFRPQ9BY79 579 aa12.16□□□□□ -0.46
LINC02143-201ENST00000519929 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.15□□□□□ -0.46
LINC02143-201ENST00000519929 PAXIP1Q6ZW49 1069 aaPredicted RBP12.14□□□□□ -0.47
LINC02143-201ENST00000519929 DCBLD2Q96PD2 775 aa12.13□□□□□ -0.47
LINC02143-201ENST00000519929 FBXO22Q8NEZ5 403 aa12.12□□□□□ -0.47
LINC02143-201ENST00000519929 PHF8Q9UPP1 1060 aa12.12□□□□□ -0.47
LINC02143-201ENST00000519929 SOX12O15370 315 aa12.1□□□□□ -0.47
LINC02143-201ENST00000519929 ILDR1Q86SU0 546 aaPredicted RBP12.1□□□□□ -0.47
LINC02143-201ENST00000519929 SPRYD3Q8NCJ5 442 aa12.1□□□□□ -0.47
LINC02143-201ENST00000519929 MS4A4AQ96JQ5 239 aa12.09□□□□□ -0.47
LINC02143-201ENST00000519929 CFAP44Q96MT7 982 aa12.09□□□□□ -0.47
LINC02143-201ENST00000519929 GOLGA2Q08379 1002 aa12.07□□□□□ -0.48
LINC02143-201ENST00000519929 MKRN3Q13064 507 aaKnown RBP12.07□□□□□ -0.48
LINC02143-201ENST00000519929 IRX5P78411 483 aaPredicted RBP12.05□□□□□ -0.48
LINC02143-201ENST00000519929 NLRP6P59044 892 aa12.04□□□□□ -0.48
LINC02143-201ENST00000519929 POTEFA5A3E0 1075 aa12.03□□□□□ -0.48
LINC02143-201ENST00000519929 PPP1R37O75864 691 aa12.03□□□□□ -0.48
LINC02143-201ENST00000519929 IER5LQ5T953 404 aa12.03□□□□□ -0.48
LINC02143-201ENST00000519929 PDCD7Q8N8D1 485 aaKnown RBP12.02□□□□□ -0.49
LINC02143-201ENST00000519929 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC02143-201ENST00000519929 COLQQ9Y215 455 aaPredicted RBP12.01□□□□□ -0.49
LINC02143-201ENST00000519929 DPY19L2Q6NUT2 758 aa12□□□□□ -0.49
LINC02143-201ENST00000519929 SLC39A7Q92504 469 aa11.98□□□□□ -0.49
LINC02143-201ENST00000519929 TSHZ2Q9NRE2 1034 aa11.98□□□□□ -0.49
LINC02143-201ENST00000519929 C7P10643 843 aa11.97□□□□□ -0.49
LINC02143-201ENST00000519929 OCEL1Q9H607 264 aa11.97□□□□□ -0.49
LINC02143-201ENST00000519929 RYDENQ9NUL5 291 aaKnown RBP11.97□□□□□ -0.49
LINC02143-201ENST00000519929 METRNQ9UJH8 293 aa11.97□□□□□ -0.49
LINC02143-201ENST00000519929 SLC24A1O60721 1099 aa11.93□□□□□ -0.5
LINC02143-201ENST00000519929 HAP1P54257 671 aaPredicted RBP11.93□□□□□ -0.5
LINC02143-201ENST00000519929 PLCG2P16885 1265 aa11.91□□□□□ -0.5
LINC02143-201ENST00000519929 SEC24BO95487 1268 aa11.88□□□□□ -0.51
LINC02143-201ENST00000519929 CADPS2Q86UW7 1296 aa11.88□□□□□ -0.51
LINC02143-201ENST00000519929 POTEB2H3BUK9 544 aa11.84□□□□□ -0.51
LINC02143-201ENST00000519929 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
LINC02143-201ENST00000519929 KDM2AQ9Y2K7 1162 aa11.84□□□□□ -0.51
LINC02143-201ENST00000519929 MICALL2Q8IY33 904 aa11.83□□□□□ -0.52
LINC02143-201ENST00000519929 POTEJP0CG39 1038 aa11.82□□□□□ -0.52
LINC02143-201ENST00000519929 BOLA1Q9Y3E2 137 aa11.81□□□□□ -0.52
LINC02143-201ENST00000519929 L3MBTL3Q96JM7 780 aaPredicted RBP11.77□□□□□ -0.53
LINC02143-201ENST00000519929 VSIG10Q8N0Z9 540 aa11.76□□□□□ -0.53
LINC02143-201ENST00000519929 NCKAP5LQ9HCH0 1330 aa11.76□□□□□ -0.53
LINC02143-201ENST00000519929 TMEM92Q6UXU6 159 aa11.73□□□□□ -0.53
LINC02143-201ENST00000519929 CRISPLD2Q9H0B8 497 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms