RNA–Protein interactions for RNA: ENST00000519802.5

PCM1-213, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-213ENST00000519802 POTEB2H3BUK9 544 aa14.65□□□□□ -0.06
PCM1-213ENST00000519802 ATMINO43313 823 aaPredicted RBP14.64□□□□□ -0.07
PCM1-213ENST00000519802 RASEFQ8IZ41 740 aa14.64□□□□□ -0.07
PCM1-213ENST00000519802 KIF12Q96FN5 646 aa14.64□□□□□ -0.07
PCM1-213ENST00000519802 FKBP8Q14318 412 aa14.63□□□□□ -0.07
PCM1-213ENST00000519802 PLCD3Q8N3E9 789 aa14.63□□□□□ -0.07
PCM1-213ENST00000519802 OTUD5Q96G74 571 aa14.6□□□□□ -0.07
PCM1-213ENST00000519802 METRNQ9UJH8 293 aa14.57□□□□□ -0.08
PCM1-213ENST00000519802 SLC39A7Q92504 469 aa14.56□□□□□ -0.08
PCM1-213ENST00000519802 C7P10643 843 aa14.55□□□□□ -0.08
PCM1-213ENST00000519802 MAP3K13O43283 966 aa14.54□□□□□ -0.08
PCM1-213ENST00000519802 ZBTB47Q9UFB7 747 aaPredicted RBP14.53□□□□□ -0.08
PCM1-213ENST00000519802 ATN1P54259 1190 aaPredicted RBP14.52□□□□□ -0.09
PCM1-213ENST00000519802 NUBP1P53384 320 aa14.5□□□□□ -0.09
PCM1-213ENST00000519802 TRPC6Q9Y210 931 aa14.5□□□□□ -0.09
PCM1-213ENST00000519802 BMP2KQ9NSY1 1161 aaPredicted RBP14.49□□□□□ -0.09
PCM1-213ENST00000519802 TIE1P35590 1138 aa14.45□□□□□ -0.1
PCM1-213ENST00000519802 POTEJP0CG39 1038 aa14.44□□□□□ -0.1
PCM1-213ENST00000519802 SGIP1Q9BQI5 828 aa14.4□□□□□ -0.1
PCM1-213ENST00000519802 FAM212AQ96EL1 285 aa14.38□□□□□ -0.11
PCM1-213ENST00000519802 PCDHB13Q9Y5F0 798 aa14.38□□□□□ -0.11
PCM1-213ENST00000519802 TTLL13PA6NNM8 815 aa14.37□□□□□ -0.11
PCM1-213ENST00000519802 POTEFA5A3E0 1075 aa14.36□□□□□ -0.11
PCM1-213ENST00000519802 MAMSTRQ6ZN01 415 aa14.36□□□□□ -0.11
PCM1-213ENST00000519802 FBXO3Q9UK99 471 aa14.35□□□□□ -0.11
PCM1-213ENST00000519802 IFNL1Q8IU54 200 aa14.31□□□□□ -0.12
PCM1-213ENST00000519802 SCUBE2Q9NQ36 999 aa14.27□□□□□ -0.13
PCM1-213ENST00000519802 TRIM35Q9UPQ4 493 aa14.27□□□□□ -0.13
PCM1-213ENST00000519802 COLQQ9Y215 455 aaPredicted RBP14.27□□□□□ -0.13
PCM1-213ENST00000519802 SEC24BO95487 1268 aa14.24□□□□□ -0.13
PCM1-213ENST00000519802 IER5LQ5T953 404 aa14.24□□□□□ -0.13
PCM1-213ENST00000519802 DCAF8Q5TAQ9 597 aa14.23□□□□□ -0.13
PCM1-213ENST00000519802 POTEMA6NI47 508 aa14.21□□□□□ -0.13
PCM1-213ENST00000519802 TMEM106CQ9BVX2 250 aa14.21□□□□□ -0.13
PCM1-213ENST00000519802 VASPP50552 380 aaPredicted RBP14.2□□□□□ -0.14
PCM1-213ENST00000519802 PYGBP11216 843 aa14.18□□□□□ -0.14
PCM1-213ENST00000519802 POTEGQ6S5H5 508 aa14.18□□□□□ -0.14
PCM1-213ENST00000519802 PLSCR2Q9NRY7 297 aa14.15□□□□□ -0.14
PCM1-213ENST00000519802 KLHL34Q8N239 644 aa14.14□□□□□ -0.15
PCM1-213ENST00000519802 LCE2DQ5TA82 110 aaPredicted RBP14.11□□□□□ -0.15
PCM1-213ENST00000519802 PCDHB8Q9UN66 801 aa14.1□□□□□ -0.15
PCM1-213ENST00000519802 FAM163AQ96GL9 167 aaPredicted RBP14.09□□□□□ -0.15
PCM1-213ENST00000519802 PLCG2P16885 1265 aa14.07□□□□□ -0.16
PCM1-213ENST00000519802 GSE1Q14687 1217 aa14.07□□□□□ -0.16
PCM1-213ENST00000519802 IRX5P78411 483 aaPredicted RBP14.06□□□□□ -0.16
PCM1-213ENST00000519802 CHRM1P11229 460 aaPredicted RBP13.99□□□□□ -0.17
PCM1-213ENST00000519802 OCEL1Q9H607 264 aa13.99□□□□□ -0.17
PCM1-213ENST00000519802 PCDH10Q9P2E7 1040 aa13.99□□□□□ -0.17
PCM1-213ENST00000519802 ZNF467Q7Z7K2 595 aaPredicted RBP13.98□□□□□ -0.17
PCM1-213ENST00000519802 SLAIN1Q8ND83 568 aa13.96□□□□□ -0.17
PCM1-213ENST00000519802 IFNLR1Q8IU57 520 aaPredicted RBP13.94□□□□□ -0.18
PCM1-213ENST00000519802 SPOCK2Q92563 424 aa13.91□□□□□ -0.18
PCM1-213ENST00000519802 PSEN1P49768 467 aa13.87□□□□□ -0.19
PCM1-213ENST00000519802 PDCD7Q8N8D1 485 aaKnown RBP13.85□□□□□ -0.19
PCM1-213ENST00000519802 GOLGA2Q08379 1002 aa13.84□□□□□ -0.19
PCM1-213ENST00000519802 MKRN3Q13064 507 aaKnown RBP13.84□□□□□ -0.19
PCM1-213ENST00000519802 CIZ1Q9ULV3 898 aaPredicted RBP13.83□□□□□ -0.2
PCM1-213ENST00000519802 ST18O60284 1047 aa13.82□□□□□ -0.2
PCM1-213ENST00000519802 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.82□□□□□ -0.2
PCM1-213ENST00000519802 PDAP1Q13442 181 aaKnown RBP13.81□□□□□ -0.2
PCM1-213ENST00000519802 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.77□□□□□ -0.219e-18■■■■■ 32.6
PCM1-213ENST00000519802 L3MBTL3Q96JM7 780 aaPredicted RBP13.75□□□□□ -0.21
PCM1-213ENST00000519802 ILDR1Q86SU0 546 aaPredicted RBP13.73□□□□□ -0.21
PCM1-213ENST00000519802 CDAN1Q8IWY9 1227 aa13.73□□□□□ -0.21
PCM1-213ENST00000519802 SNPHO15079 494 aa13.72□□□□□ -0.21
PCM1-213ENST00000519802 C3orf67Q6ZVT6 689 aa13.72□□□□□ -0.21
PCM1-213ENST00000519802 CABP2Q9NPB3 220 aa13.7□□□□□ -0.22
PCM1-213ENST00000519802 TMEM121BQ9BXQ6 578 aaPredicted RBP13.68□□□□□ -0.22
PCM1-213ENST00000519802 TRIM41Q8WV44 630 aa13.66□□□□□ -0.22
PCM1-213ENST00000519802 DPY19L2Q6NUT2 758 aa13.65□□□□□ -0.22
PCM1-213ENST00000519802 MARVELD3Q96A59 401 aa13.58□□□□□ -0.24
PCM1-213ENST00000519802 BOLA1Q9Y3E2 137 aa13.57□□□□□ -0.24
PCM1-213ENST00000519802 EFCAB3Q8N7B9 438 aa13.54□□□□□ -0.24
PCM1-213ENST00000519802 G3V3G9 751 aa13.53□□□□□ -0.24
PCM1-213ENST00000519802 RNF25Q96BH1 459 aaPredicted RBP13.49□□□□□ -0.25
PCM1-213ENST00000519802 RIOK3O14730 519 aaKnown RBP13.48□□□□□ -0.25
PCM1-213ENST00000519802 EMP3P54852 163 aa13.48□□□□□ -0.25
PCM1-213ENST00000519802 HOXB3P14651 431 aaPredicted RBP13.43□□□□□ -0.26
PCM1-213ENST00000519802 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.42□□□□□ -0.26
PCM1-213ENST00000519802 VGFO15240 615 aaPredicted RBP13.42□□□□□ -0.26
PCM1-213ENST00000519802 ZFP91Q96JP5 570 aaPredicted RBP13.42□□□□□ -0.26
PCM1-213ENST00000519802 SPNS2Q8IVW8 549 aa13.41□□□□□ -0.26
PCM1-213ENST00000519802 POTEB3A0JP26 581 aa13.4□□□□□ -0.26
PCM1-213ENST00000519802 SOX12O15370 315 aa13.4□□□□□ -0.26
PCM1-213ENST00000519802 POTEBQ6S5H4 581 aa13.4□□□□□ -0.26
PCM1-213ENST00000519802 HS3ST6Q96QI5 342 aa13.39□□□□□ -0.27
PCM1-213ENST00000519802 FAM205CA6NFA0 338 aa13.38□□□□□ -0.27
PCM1-213ENST00000519802 MMRN1Q13201 1228 aa13.37□□□□□ -0.27
PCM1-213ENST00000519802 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
PCM1-213ENST00000519802 MS4A4AQ96JQ5 239 aa13.36□□□□□ -0.27
PCM1-213ENST00000519802 PHF8Q9UPP1 1060 aa13.34□□□□□ -0.27
PCM1-213ENST00000519802 DOK7Q18PE1 504 aa13.33□□□□□ -0.28
PCM1-213ENST00000519802 ZNF710Q8N1W2 664 aa13.33□□□□□ -0.28
PCM1-213ENST00000519802 HOXB1P14653 301 aaPredicted RBP13.32□□□□□ -0.28
PCM1-213ENST00000519802 TMEM92Q6UXU6 159 aa13.32□□□□□ -0.28
PCM1-213ENST00000519802 KRTAP3-3Q9BYR6 98 aa13.32□□□□□ -0.28
PCM1-213ENST00000519802 KRTAP3-2Q9BYR7 98 aa13.32□□□□□ -0.28
PCM1-213ENST00000519802 TAOK2Q9UL54 1235 aa13.26□□□□□ -0.29
PCM1-213ENST00000519802 BCL11BQ9C0K0 894 aaPredicted RBP13.25□□□□□ -0.29
PCM1-213ENST00000519802 RIMBP2O15034 1052 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 354.4 ms