RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 PELP1Q8IZL8 1130 aaKnown RBP7.23□□□□□ -1.25
CCNC-208ENST00000519617 POTEB2H3BUK9 544 aa7.21□□□□□ -1.26
CCNC-208ENST00000519617 ATMINO43313 823 aaPredicted RBP7.2□□□□□ -1.26
CCNC-208ENST00000519617 KIF12Q96FN5 646 aa7.2□□□□□ -1.26
CCNC-208ENST00000519617 OTUD5Q96G74 571 aa7.2□□□□□ -1.26
CCNC-208ENST00000519617 RASEFQ8IZ41 740 aa7.18□□□□□ -1.26
CCNC-208ENST00000519617 C7P10643 843 aa7.17□□□□□ -1.26
CCNC-208ENST00000519617 PLCD3Q8N3E9 789 aa7.17□□□□□ -1.26
CCNC-208ENST00000519617 SLC39A7Q92504 469 aa7.17□□□□□ -1.26
CCNC-208ENST00000519617 METRNQ9UJH8 293 aa7.16□□□□□ -1.26
CCNC-208ENST00000519617 MAP3K13O43283 966 aa7.14□□□□□ -1.27
CCNC-208ENST00000519617 FKBP8Q14318 412 aa7.14□□□□□ -1.27
CCNC-208ENST00000519617 ZBTB47Q9UFB7 747 aaPredicted RBP7.14□□□□□ -1.27
CCNC-208ENST00000519617 ATN1P54259 1190 aaPredicted RBP7.13□□□□□ -1.27
CCNC-208ENST00000519617 NUBP1P53384 320 aa7.12□□□□□ -1.27
CCNC-208ENST00000519617 BMP2KQ9NSY1 1161 aaPredicted RBP7.12□□□□□ -1.27
CCNC-208ENST00000519617 POTEJP0CG39 1038 aa7.11□□□□□ -1.27
CCNC-208ENST00000519617 TIE1P35590 1138 aa7.11□□□□□ -1.27
CCNC-208ENST00000519617 TRPC6Q9Y210 931 aa7.11□□□□□ -1.27
CCNC-208ENST00000519617 SGIP1Q9BQI5 828 aa7.1□□□□□ -1.27
CCNC-208ENST00000519617 MAMSTRQ6ZN01 415 aa7.09□□□□□ -1.27
CCNC-208ENST00000519617 POTEFA5A3E0 1075 aa7.07□□□□□ -1.28
CCNC-208ENST00000519617 TTLL13PA6NNM8 815 aa7.06□□□□□ -1.28
CCNC-208ENST00000519617 PCDHB13Q9Y5F0 798 aa7.06□□□□□ -1.28
CCNC-208ENST00000519617 FAM212AQ96EL1 285 aa7.05□□□□□ -1.28
CCNC-208ENST00000519617 FBXO3Q9UK99 471 aa7.04□□□□□ -1.28
CCNC-208ENST00000519617 IER5LQ5T953 404 aa7.02□□□□□ -1.29
CCNC-208ENST00000519617 IFNL1Q8IU54 200 aa7.02□□□□□ -1.29
CCNC-208ENST00000519617 SCUBE2Q9NQ36 999 aa7.02□□□□□ -1.29
CCNC-208ENST00000519617 TRIM35Q9UPQ4 493 aa7.01□□□□□ -1.29
CCNC-208ENST00000519617 COLQQ9Y215 455 aaPredicted RBP7.01□□□□□ -1.29
CCNC-208ENST00000519617 POTEMA6NI47 508 aa7□□□□□ -1.29
CCNC-208ENST00000519617 SEC24BO95487 1268 aa6.99□□□□□ -1.29
CCNC-208ENST00000519617 POTEGQ6S5H5 508 aa6.99□□□□□ -1.29
CCNC-208ENST00000519617 DCAF8Q5TAQ9 597 aa6.98□□□□□ -1.29
CCNC-208ENST00000519617 TMEM106CQ9BVX2 250 aa6.97□□□□□ -1.29
CCNC-208ENST00000519617 VASPP50552 380 aaPredicted RBP6.95□□□□□ -1.3
CCNC-208ENST00000519617 LCE2DQ5TA82 110 aaPredicted RBP6.95□□□□□ -1.3
CCNC-208ENST00000519617 PYGBP11216 843 aa6.94□□□□□ -1.3
CCNC-208ENST00000519617 PCDH10Q9P2E7 1040 aa6.94□□□□□ -1.3
CCNC-208ENST00000519617 FAM163AQ96GL9 167 aaPredicted RBP6.93□□□□□ -1.3
CCNC-208ENST00000519617 IRX5P78411 483 aaPredicted RBP6.92□□□□□ -1.3
CCNC-208ENST00000519617 KLHL34Q8N239 644 aa6.92□□□□□ -1.3
CCNC-208ENST00000519617 PLCG2P16885 1265 aa6.91□□□□□ -1.3
CCNC-208ENST00000519617 GSE1Q14687 1217 aa6.91□□□□□ -1.3
CCNC-208ENST00000519617 PCDHB8Q9UN66 801 aa6.91□□□□□ -1.3
CCNC-208ENST00000519617 CHRM1P11229 460 aaPredicted RBP6.9□□□□□ -1.3
CCNC-208ENST00000519617 OCEL1Q9H607 264 aa6.88□□□□□ -1.31
CCNC-208ENST00000519617 ZNF467Q7Z7K2 595 aaPredicted RBP6.87□□□□□ -1.31
CCNC-208ENST00000519617 SLAIN1Q8ND83 568 aa6.86□□□□□ -1.31
CCNC-208ENST00000519617 IFNLR1Q8IU57 520 aaPredicted RBP6.82□□□□□ -1.32
CCNC-208ENST00000519617 SPOCK2Q92563 424 aa6.82□□□□□ -1.32
CCNC-208ENST00000519617 ST18O60284 1047 aa6.8□□□□□ -1.32
CCNC-208ENST00000519617 PSEN1P49768 467 aa6.8□□□□□ -1.32
CCNC-208ENST00000519617 PDCD7Q8N8D1 485 aaKnown RBP6.8□□□□□ -1.32
CCNC-208ENST00000519617 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.8□□□□□ -1.32
CCNC-208ENST00000519617 MKRN3Q13064 507 aaKnown RBP6.79□□□□□ -1.32
CCNC-208ENST00000519617 GOLGA2Q08379 1002 aa6.78□□□□□ -1.32
CCNC-208ENST00000519617 PDAP1Q13442 181 aaKnown RBP6.77□□□□□ -1.33
CCNC-208ENST00000519617 ILDR1Q86SU0 546 aaPredicted RBP6.77□□□□□ -1.33
CCNC-208ENST00000519617 L3MBTL3Q96JM7 780 aaPredicted RBP6.77□□□□□ -1.33
CCNC-208ENST00000519617 SNPHO15079 494 aa6.76□□□□□ -1.33
CCNC-208ENST00000519617 CDAN1Q8IWY9 1227 aa6.76□□□□□ -1.33
CCNC-208ENST00000519617 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.76□□□□□ -1.334e-6■■□□□ 11.8
CCNC-208ENST00000519617 CIZ1Q9ULV3 898 aaPredicted RBP6.76□□□□□ -1.33
CCNC-208ENST00000519617 TMEM121BQ9BXQ6 578 aaPredicted RBP6.75□□□□□ -1.33
CCNC-208ENST00000519617 C3orf67Q6ZVT6 689 aa6.73□□□□□ -1.33
CCNC-208ENST00000519617 TRIM41Q8WV44 630 aa6.71□□□□□ -1.34
CCNC-208ENST00000519617 CABP2Q9NPB3 220 aa6.71□□□□□ -1.34
CCNC-208ENST00000519617 DPY19L2Q6NUT2 758 aa6.69□□□□□ -1.34
CCNC-208ENST00000519617 MARVELD3Q96A59 401 aa6.66□□□□□ -1.34
CCNC-208ENST00000519617 BOLA1Q9Y3E2 137 aa6.66□□□□□ -1.34
CCNC-208ENST00000519617 G3V3G9 751 aa6.64□□□□□ -1.35
CCNC-208ENST00000519617 EFCAB3Q8N7B9 438 aa6.63□□□□□ -1.35
CCNC-208ENST00000519617 EMP3P54852 163 aa6.62□□□□□ -1.35
CCNC-208ENST00000519617 RIOK3O14730 519 aaKnown RBP6.61□□□□□ -1.35
CCNC-208ENST00000519617 SPNS2Q8IVW8 549 aa6.61□□□□□ -1.35
CCNC-208ENST00000519617 HOXB3P14651 431 aaPredicted RBP6.6□□□□□ -1.35
CCNC-208ENST00000519617 RNF25Q96BH1 459 aaPredicted RBP6.6□□□□□ -1.35
CCNC-208ENST00000519617 POTEB3A0JP26 581 aa6.59□□□□□ -1.35
CCNC-208ENST00000519617 SOX12O15370 315 aa6.59□□□□□ -1.35
CCNC-208ENST00000519617 MMRN1Q13201 1228 aa6.59□□□□□ -1.35
CCNC-208ENST00000519617 POTEBQ6S5H4 581 aa6.59□□□□□ -1.35
CCNC-208ENST00000519617 VGFO15240 615 aaPredicted RBP6.58□□□□□ -1.36
CCNC-208ENST00000519617 HS3ST6Q96QI5 342 aa6.58□□□□□ -1.36
CCNC-208ENST00000519617 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.57□□□□□ -1.36
CCNC-208ENST00000519617 FAM205CA6NFA0 338 aa6.57□□□□□ -1.36
CCNC-208ENST00000519617 ZFP91Q96JP5 570 aaPredicted RBP6.57□□□□□ -1.36
CCNC-208ENST00000519617 HOXB1P14653 301 aaPredicted RBP6.56□□□□□ -1.36
CCNC-208ENST00000519617 DOK7Q18PE1 504 aa6.56□□□□□ -1.36
CCNC-208ENST00000519617 MICALL2Q8IY33 904 aa6.56□□□□□ -1.36
CCNC-208ENST00000519617 ZNF710Q8N1W2 664 aa6.55□□□□□ -1.36
CCNC-208ENST00000519617 MS4A4AQ96JQ5 239 aa6.55□□□□□ -1.36
CCNC-208ENST00000519617 KRTAP3-3Q9BYR6 98 aa6.55□□□□□ -1.36
CCNC-208ENST00000519617 KRTAP3-2Q9BYR7 98 aa6.55□□□□□ -1.36
CCNC-208ENST00000519617 TMEM92Q6UXU6 159 aa6.54□□□□□ -1.36
CCNC-208ENST00000519617 PHF8Q9UPP1 1060 aa6.54□□□□□ -1.36
CCNC-208ENST00000519617 RIMBP2O15034 1052 aa6.51□□□□□ -1.37
CCNC-208ENST00000519617 ZSWIM6Q9HCJ5 1215 aa6.51□□□□□ -1.37
CCNC-208ENST00000519617 TAOK2Q9UL54 1235 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms