RNA–Protein interactions for RNA: ENST00000519554.5

PCMTD1-202, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 3

Gene PCMTD1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-202ENST00000519554 ZBTB47Q9UFB7 747 aaPredicted RBP18.02■□□□□ 0.48
PCMTD1-202ENST00000519554 MS4A3Q96HJ5 214 aa17.99■□□□□ 0.47
PCMTD1-202ENST00000519554 NUBP1P53384 320 aa17.97■□□□□ 0.47
PCMTD1-202ENST00000519554 KIF12Q96FN5 646 aa17.91■□□□□ 0.46
PCMTD1-202ENST00000519554 VASPP50552 380 aaPredicted RBP17.9■□□□□ 0.46
PCMTD1-202ENST00000519554 LHX8Q68G74 356 aa17.9■□□□□ 0.46
PCMTD1-202ENST00000519554 MAP3K13O43283 966 aa17.82■□□□□ 0.44
PCMTD1-202ENST00000519554 FAM212AQ96EL1 285 aa17.8■□□□□ 0.44
PCMTD1-202ENST00000519554 ASTLQ6HA08 431 aaPredicted RBP17.79■□□□□ 0.44
PCMTD1-202ENST00000519554 PELP1Q8IZL8 1130 aaKnown RBP17.79■□□□□ 0.44
PCMTD1-202ENST00000519554 ATMINO43313 823 aaPredicted RBP17.76■□□□□ 0.43
PCMTD1-202ENST00000519554 TRPC6Q9Y210 931 aa17.76■□□□□ 0.43
PCMTD1-202ENST00000519554 KLHL34Q8N239 644 aa17.7■□□□□ 0.42
PCMTD1-202ENST00000519554 BMP2KQ9NSY1 1161 aaPredicted RBP17.67■□□□□ 0.42
PCMTD1-202ENST00000519554 PCDHB13Q9Y5F0 798 aa17.67■□□□□ 0.42
PCMTD1-202ENST00000519554 ATN1P54259 1190 aaPredicted RBP17.66■□□□□ 0.42
PCMTD1-202ENST00000519554 DCAF8Q5TAQ9 597 aa17.66■□□□□ 0.42
PCMTD1-202ENST00000519554 SGIP1Q9BQI5 828 aa17.66■□□□□ 0.42
PCMTD1-202ENST00000519554 TIE1P35590 1138 aa17.63■□□□□ 0.41
PCMTD1-202ENST00000519554 POTEB2H3BUK9 544 aa17.61■□□□□ 0.41
PCMTD1-202ENST00000519554 IFNLR1Q8IU57 520 aaPredicted RBP17.61■□□□□ 0.41
PCMTD1-202ENST00000519554 METRNQ9UJH8 293 aa17.61■□□□□ 0.41
PCMTD1-202ENST00000519554 IFNL1Q8IU54 200 aa17.6■□□□□ 0.41
PCMTD1-202ENST00000519554 SLC39A7Q92504 469 aa17.6■□□□□ 0.41
PCMTD1-202ENST00000519554 PYGBP11216 843 aa17.57■□□□□ 0.4
PCMTD1-202ENST00000519554 TTLL13PA6NNM8 815 aa17.56■□□□□ 0.4
PCMTD1-202ENST00000519554 C7P10643 843 aa17.56■□□□□ 0.4
PCMTD1-202ENST00000519554 GSE1Q14687 1217 aa17.51■□□□□ 0.39
PCMTD1-202ENST00000519554 SPOCK2Q92563 424 aa17.48■□□□□ 0.39
PCMTD1-202ENST00000519554 OTUD5Q96G74 571 aa17.46■□□□□ 0.39
PCMTD1-202ENST00000519554 POTEFA5A3E0 1075 aa17.44■□□□□ 0.38
PCMTD1-202ENST00000519554 TRIM35Q9UPQ4 493 aa17.44■□□□□ 0.38
PCMTD1-202ENST00000519554 TMEM106CQ9BVX2 250 aa17.42■□□□□ 0.38
PCMTD1-202ENST00000519554 PCDHB8Q9UN66 801 aa17.42■□□□□ 0.38
PCMTD1-202ENST00000519554 POTEJP0CG39 1038 aa17.41■□□□□ 0.38
PCMTD1-202ENST00000519554 CHRM1P11229 460 aaPredicted RBP17.36■□□□□ 0.37
PCMTD1-202ENST00000519554 COLQQ9Y215 455 aaPredicted RBP17.34■□□□□ 0.37
PCMTD1-202ENST00000519554 IER5LQ5T953 404 aa17.33■□□□□ 0.36
PCMTD1-202ENST00000519554 CIZ1Q9ULV3 898 aaPredicted RBP17.33■□□□□ 0.36
PCMTD1-202ENST00000519554 ZNF467Q7Z7K2 595 aaPredicted RBP17.3■□□□□ 0.36
PCMTD1-202ENST00000519554 SEC24BO95487 1268 aa17.28■□□□□ 0.36
PCMTD1-202ENST00000519554 MAMSTRQ6ZN01 415 aa17.22■□□□□ 0.35
PCMTD1-202ENST00000519554 IRX5P78411 483 aaPredicted RBP17.19■□□□□ 0.34
PCMTD1-202ENST00000519554 SCUBE2Q9NQ36 999 aa17.17■□□□□ 0.34
PCMTD1-202ENST00000519554 PSEN1P49768 467 aa17.16■□□□□ 0.34
PCMTD1-202ENST00000519554 PLCG2P16885 1265 aa17.14■□□□□ 0.33
PCMTD1-202ENST00000519554 PDAP1Q13442 181 aaKnown RBP17.11■□□□□ 0.33
PCMTD1-202ENST00000519554 TRIM41Q8WV44 630 aa17.1■□□□□ 0.33
PCMTD1-202ENST00000519554 OCEL1Q9H607 264 aa17.07■□□□□ 0.32
PCMTD1-202ENST00000519554 GOLGA2Q08379 1002 aa17.02■□□□□ 0.32
PCMTD1-202ENST00000519554 MKRN3Q13064 507 aaKnown RBP17.01■□□□□ 0.31
PCMTD1-202ENST00000519554 PDCD7Q8N8D1 485 aaKnown RBP17■□□□□ 0.31
PCMTD1-202ENST00000519554 RNF25Q96BH1 459 aaPredicted RBP16.97■□□□□ 0.31
PCMTD1-202ENST00000519554 CABP2Q9NPB3 220 aa16.96■□□□□ 0.31
PCMTD1-202ENST00000519554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.92■□□□□ 0.39e-7■■■■□ 22.6
PCMTD1-202ENST00000519554 LCE2DQ5TA82 110 aaPredicted RBP16.9■□□□□ 0.3
PCMTD1-202ENST00000519554 ILDR1Q86SU0 546 aaPredicted RBP16.9■□□□□ 0.3
PCMTD1-202ENST00000519554 RIOK3O14730 519 aaKnown RBP16.89■□□□□ 0.29
PCMTD1-202ENST00000519554 SLAIN1Q8ND83 568 aa16.89■□□□□ 0.29
PCMTD1-202ENST00000519554 POTEMA6NI47 508 aa16.83■□□□□ 0.28
PCMTD1-202ENST00000519554 FAM163AQ96GL9 167 aaPredicted RBP16.83■□□□□ 0.28
PCMTD1-202ENST00000519554 POTEGQ6S5H5 508 aa16.81■□□□□ 0.28
PCMTD1-202ENST00000519554 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.8■□□□□ 0.28
PCMTD1-202ENST00000519554 VGFO15240 615 aaPredicted RBP16.8■□□□□ 0.28
PCMTD1-202ENST00000519554 DPY19L2Q6NUT2 758 aa16.8■□□□□ 0.28
PCMTD1-202ENST00000519554 EFCAB3Q8N7B9 438 aa16.8■□□□□ 0.28
PCMTD1-202ENST00000519554 ZFP91Q96JP5 570 aaPredicted RBP16.8■□□□□ 0.28
PCMTD1-202ENST00000519554 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.8■□□□□ 0.28
PCMTD1-202ENST00000519554 L3MBTL3Q96JM7 780 aaPredicted RBP16.79■□□□□ 0.28
PCMTD1-202ENST00000519554 PKD2Q13563 968 aa16.74■□□□□ 0.27
PCMTD1-202ENST00000519554 ECM2O94769 699 aaPredicted RBP16.73■□□□□ 0.27
PCMTD1-202ENST00000519554 C3orf67Q6ZVT6 689 aa16.73■□□□□ 0.27
PCMTD1-202ENST00000519554 BOLA1Q9Y3E2 137 aa16.67■□□□□ 0.26
PCMTD1-202ENST00000519554 RGL2O15211 777 aa16.63■□□□□ 0.25
PCMTD1-202ENST00000519554 ST18O60284 1047 aa16.63■□□□□ 0.25
PCMTD1-202ENST00000519554 SOX12O15370 315 aa16.62■□□□□ 0.25
PCMTD1-202ENST00000519554 BCL11BQ9C0K0 894 aaPredicted RBP16.62■□□□□ 0.25
PCMTD1-202ENST00000519554 TAOK2Q9UL54 1235 aa16.61■□□□□ 0.25
PCMTD1-202ENST00000519554 MS4A4AQ96JQ5 239 aa16.6■□□□□ 0.25
PCMTD1-202ENST00000519554 PHF8Q9UPP1 1060 aa16.6■□□□□ 0.25
PCMTD1-202ENST00000519554 G3V3G9 751 aa16.59■□□□□ 0.25
PCMTD1-202ENST00000519554 TMEM121BQ9BXQ6 578 aaPredicted RBP16.58■□□□□ 0.24
PCMTD1-202ENST00000519554 STK24Q9Y6E0 443 aa16.57■□□□□ 0.24
PCMTD1-202ENST00000519554 SNPHO15079 494 aa16.56■□□□□ 0.24
PCMTD1-202ENST00000519554 STK25O00506 426 aa16.54■□□□□ 0.24
PCMTD1-202ENST00000519554 MICALL2Q8IY33 904 aa16.5■□□□□ 0.23
PCMTD1-202ENST00000519554 PCDH10Q9P2E7 1040 aa16.5■□□□□ 0.23
PCMTD1-202ENST00000519554 FBXO22Q8NEZ5 403 aa16.49■□□□□ 0.23
PCMTD1-202ENST00000519554 PLSCR2Q9NRY7 297 aa16.47■□□□□ 0.23
PCMTD1-202ENST00000519554 NLRP6P59044 892 aa16.46■□□□□ 0.23
PCMTD1-202ENST00000519554 MFRPQ9BY79 579 aa16.46■□□□□ 0.23
PCMTD1-202ENST00000519554 TMEM92Q6UXU6 159 aa16.42■□□□□ 0.22
PCMTD1-202ENST00000519554 HOXB3P14651 431 aaPredicted RBP16.39■□□□□ 0.21
PCMTD1-202ENST00000519554 MARVELD3Q96A59 401 aa16.39■□□□□ 0.21
PCMTD1-202ENST00000519554 CDAN1Q8IWY9 1227 aa16.38■□□□□ 0.21
PCMTD1-202ENST00000519554 EMP3P54852 163 aa16.28■□□□□ 0.2
PCMTD1-202ENST00000519554 HS6ST3Q8IZP7 471 aa16.27■□□□□ 0.2
PCMTD1-202ENST00000519554 DOK7Q18PE1 504 aa16.25■□□□□ 0.19
PCMTD1-202ENST00000519554 ZNF710Q8N1W2 664 aa16.22■□□□□ 0.19
PCMTD1-202ENST00000519554 POTEB3A0JP26 581 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms