RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 RGL2O15211 777 aa16.52■□□□□ 0.24
PTPN12-213ENST00000519553 RNF25Q96BH1 459 aaPredicted RBP16.46■□□□□ 0.23
PTPN12-213ENST00000519553 CCDC61Q9Y6R9 512 aa16.46■□□□□ 0.23
PTPN12-213ENST00000519553 CHRM1P11229 460 aaPredicted RBP16.45■□□□□ 0.22
PTPN12-213ENST00000519553 PYGBP11216 843 aa16.43■□□□□ 0.22
PTPN12-213ENST00000519553 CD44P16070 742 aaKnown RBP16.42■□□□□ 0.22
PTPN12-213ENST00000519553 C19orf67A6NJJ6 358 aa16.4■□□□□ 0.22
PTPN12-213ENST00000519553 PAK3O75914 559 aaPredicted RBP16.4■□□□□ 0.22
PTPN12-213ENST00000519553 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
PTPN12-213ENST00000519553 ZRANB1Q9UGI0 708 aa16.35■□□□□ 0.21
PTPN12-213ENST00000519553 RIOK3O14730 519 aaKnown RBP16.31■□□□□ 0.2
PTPN12-213ENST00000519553 KIF12Q96FN5 646 aa16.26■□□□□ 0.19
PTPN12-213ENST00000519553 PHF12Q96QT6 1004 aa16.26■□□□□ 0.19
PTPN12-213ENST00000519553 ZNF579Q8NAF0 562 aaKnown RBP16.25■□□□□ 0.19
PTPN12-213ENST00000519553 HAX1O00165 279 aa16.23■□□□□ 0.19
PTPN12-213ENST00000519553 MAP3K13O43283 966 aa16.23■□□□□ 0.19
PTPN12-213ENST00000519553 EVX2Q03828 476 aa16.21■□□□□ 0.19
PTPN12-213ENST00000519553 VGFO15240 615 aaPredicted RBP16.2■□□□□ 0.18
PTPN12-213ENST00000519553 ZNF467Q7Z7K2 595 aaPredicted RBP16.2■□□□□ 0.18
PTPN12-213ENST00000519553 SGIP1Q9BQI5 828 aa16.19■□□□□ 0.18
PTPN12-213ENST00000519553 PCDHB8Q9UN66 801 aa16.19■□□□□ 0.18
PTPN12-213ENST00000519553 PCDHB13Q9Y5F0 798 aa16.19■□□□□ 0.18
PTPN12-213ENST00000519553 CHGAP10645 457 aaKnown RBP16.17■□□□□ 0.18
PTPN12-213ENST00000519553 IFNL1Q8IU54 200 aa16.17■□□□□ 0.18
PTPN12-213ENST00000519553 HS6ST3Q8IZP7 471 aa16.16■□□□□ 0.18
PTPN12-213ENST00000519553 TAOK2Q9UL54 1235 aa16.16■□□□□ 0.18
PTPN12-213ENST00000519553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.13■□□□□ 0.17
PTPN12-213ENST00000519553 ZFP91Q96JP5 570 aaPredicted RBP16.13■□□□□ 0.17
PTPN12-213ENST00000519553 PDAP1Q13442 181 aaKnown RBP16.08■□□□□ 0.16
PTPN12-213ENST00000519553 BBXQ8WY36 941 aaPredicted RBP16.08■□□□□ 0.16
PTPN12-213ENST00000519553 MS4A3Q96HJ5 214 aa16.08■□□□□ 0.16
PTPN12-213ENST00000519553 STK25O00506 426 aa16.07■□□□□ 0.16
PTPN12-213ENST00000519553 BCL11BQ9C0K0 894 aaPredicted RBP16.05■□□□□ 0.16
PTPN12-213ENST00000519553 DNAJC5Q9H3Z4 198 aa16.05■□□□□ 0.16
PTPN12-213ENST00000519553 PSEN1P49768 467 aa16.03■□□□□ 0.16
PTPN12-213ENST00000519553 TRPC6Q9Y210 931 aa16.01■□□□□ 0.15
PTPN12-213ENST00000519553 STK24Q9Y6E0 443 aa16.01■□□□□ 0.15
PTPN12-213ENST00000519553 GALR2O43603 387 aaPredicted RBP15.99■□□□□ 0.15
PTPN12-213ENST00000519553 PLCB2Q00722 1185 aa15.98■□□□□ 0.15
PTPN12-213ENST00000519553 NKX1-1Q15270 411 aaPredicted RBP15.97■□□□□ 0.15
PTPN12-213ENST00000519553 CLCN6P51797 869 aa15.95■□□□□ 0.14
PTPN12-213ENST00000519553 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.95■□□□□ 0.14
PTPN12-213ENST00000519553 SLC24A1O60721 1099 aa15.88■□□□□ 0.13
PTPN12-213ENST00000519553 TIE1P35590 1138 aa15.87■□□□□ 0.13
PTPN12-213ENST00000519553 TMEM106CQ9BVX2 250 aa15.87■□□□□ 0.13
PTPN12-213ENST00000519553 GABBR2O75899 941 aa15.86■□□□□ 0.13
PTPN12-213ENST00000519553 PAXIP1Q6ZW49 1069 aaPredicted RBP15.86■□□□□ 0.13
PTPN12-213ENST00000519553 BMP2KQ9NSY1 1161 aaPredicted RBP15.85■□□□□ 0.13
PTPN12-213ENST00000519553 CABP2Q9NPB3 220 aa15.84■□□□□ 0.13
PTPN12-213ENST00000519553 TTLL13PA6NNM8 815 aa15.83■□□□□ 0.12
PTPN12-213ENST00000519553 SPRYD3Q8NCJ5 442 aa15.82■□□□□ 0.12
PTPN12-213ENST00000519553 CFAP44Q96MT7 982 aa15.82■□□□□ 0.12
PTPN12-213ENST00000519553 GTPBP6O43824 516 aaPredicted RBP15.81■□□□□ 0.12
PTPN12-213ENST00000519553 EFCAB3Q8N7B9 438 aa15.79■□□□□ 0.12
PTPN12-213ENST00000519553 SP7Q8TDD2 431 aaPredicted RBP15.77■□□□□ 0.12
PTPN12-213ENST00000519553 MFRPQ9BY79 579 aa15.76■□□□□ 0.11
PTPN12-213ENST00000519553 ASTLQ6HA08 431 aaPredicted RBP15.73■□□□□ 0.11
PTPN12-213ENST00000519553 ATMINO43313 823 aaPredicted RBP15.72■□□□□ 0.11
PTPN12-213ENST00000519553 ATN1P54259 1190 aaPredicted RBP15.71■□□□□ 0.11
PTPN12-213ENST00000519553 TRIM35Q9UPQ4 493 aa15.71■□□□□ 0.11
PTPN12-213ENST00000519553 SOX12O15370 315 aa15.69■□□□□ 0.1
PTPN12-213ENST00000519553 HAP1P54257 671 aaPredicted RBP15.69■□□□□ 0.1
PTPN12-213ENST00000519553 FBXO22Q8NEZ5 403 aa15.69■□□□□ 0.1
PTPN12-213ENST00000519553 GOLGA2Q08379 1002 aa15.68■□□□□ 0.1
PTPN12-213ENST00000519553 RYDENQ9NUL5 291 aaKnown RBP15.68■□□□□ 0.1
PTPN12-213ENST00000519553 PHF8Q9UPP1 1060 aa15.68■□□□□ 0.1
PTPN12-213ENST00000519553 MKRN3Q13064 507 aaKnown RBP15.64■□□□□ 0.09
PTPN12-213ENST00000519553 NLRP6P59044 892 aa15.63■□□□□ 0.09
PTPN12-213ENST00000519553 MS4A4AQ96JQ5 239 aa15.62■□□□□ 0.09
PTPN12-213ENST00000519553 ILDR1Q86SU0 546 aaPredicted RBP15.61■□□□□ 0.09
PTPN12-213ENST00000519553 DCBLD2Q96PD2 775 aa15.61■□□□□ 0.09
PTPN12-213ENST00000519553 TSHZ2Q9NRE2 1034 aa15.61■□□□□ 0.09
PTPN12-213ENST00000519553 POTEIP0CG38 1075 aa15.59■□□□□ 0.09
PTPN12-213ENST00000519553 PELP1Q8IZL8 1130 aaKnown RBP15.59■□□□□ 0.09
PTPN12-213ENST00000519553 PPP1R37O75864 691 aa15.55■□□□□ 0.08
PTPN12-213ENST00000519553 IER5LQ5T953 404 aa15.54■□□□□ 0.08
PTPN12-213ENST00000519553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.54■□□□□ 0.082e-9■□□□□ 8.6
PTPN12-213ENST00000519553 IRX5P78411 483 aaPredicted RBP15.53■□□□□ 0.08
PTPN12-213ENST00000519553 PDCD7Q8N8D1 485 aaKnown RBP15.5■□□□□ 0.07
PTPN12-213ENST00000519553 VSIG10Q8N0Z9 540 aa15.46■□□□□ 0.07
PTPN12-213ENST00000519553 KDM2AQ9Y2K7 1162 aa15.46■□□□□ 0.07
PTPN12-213ENST00000519553 SLC39A7Q92504 469 aa15.44■□□□□ 0.06
PTPN12-213ENST00000519553 OCEL1Q9H607 264 aa15.44■□□□□ 0.06
PTPN12-213ENST00000519553 DPY19L2Q6NUT2 758 aa15.43■□□□□ 0.06
PTPN12-213ENST00000519553 CADPS2Q86UW7 1296 aa15.42■□□□□ 0.06
PTPN12-213ENST00000519553 POTEFA5A3E0 1075 aa15.41■□□□□ 0.06
PTPN12-213ENST00000519553 COLQQ9Y215 455 aaPredicted RBP15.41■□□□□ 0.06
PTPN12-213ENST00000519553 METRNQ9UJH8 293 aa15.4■□□□□ 0.06
PTPN12-213ENST00000519553 C7P10643 843 aa15.39■□□□□ 0.05
PTPN12-213ENST00000519553 PLCG2P16885 1265 aa15.38■□□□□ 0.05
PTPN12-213ENST00000519553 SEC24BO95487 1268 aa15.34■□□□□ 0.05
PTPN12-213ENST00000519553 MICALL2Q8IY33 904 aa15.31■□□□□ 0.04
PTPN12-213ENST00000519553 TMEM121BQ9BXQ6 578 aaPredicted RBP15.28■□□□□ 0.04
PTPN12-213ENST00000519553 BOLA1Q9Y3E2 137 aa15.27■□□□□ 0.04
PTPN12-213ENST00000519553 NCKAP5LQ9HCH0 1330 aa15.25■□□□□ 0.03
PTPN12-213ENST00000519553 L3MBTL3Q96JM7 780 aaPredicted RBP15.22■□□□□ 0.03
PTPN12-213ENST00000519553 CRISPLD2Q9H0B8 497 aa15.22■□□□□ 0.03
PTPN12-213ENST00000519553 G3V3G9 751 aa15.16■□□□□ 0.02
PTPN12-213ENST00000519553 MFSD10Q14728 455 aa15.14■□□□□ 0.01
PTPN12-213ENST00000519553 PDE4AP27815 886 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms