RNA–Protein interactions for RNA: ENST00000519542.1

GABRA1-205, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 3

Gene GABRA1, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-205ENST00000519542 FBXO3Q9UK99 471 aa9.8□□□□□ -0.84
GABRA1-205ENST00000519542 MS4A3Q96HJ5 214 aa9.79□□□□□ -0.84
GABRA1-205ENST00000519542 ZBTB47Q9UFB7 747 aaPredicted RBP9.78□□□□□ -0.84
GABRA1-205ENST00000519542 KIF12Q96FN5 646 aa9.77□□□□□ -0.85
GABRA1-205ENST00000519542 LHX8Q68G74 356 aa9.75□□□□□ -0.85
GABRA1-205ENST00000519542 VASPP50552 380 aaPredicted RBP9.72□□□□□ -0.85
GABRA1-205ENST00000519542 PELP1Q8IZL8 1130 aaKnown RBP9.71□□□□□ -0.86
GABRA1-205ENST00000519542 ASTLQ6HA08 431 aaPredicted RBP9.7□□□□□ -0.86
GABRA1-205ENST00000519542 MAP3K13O43283 966 aa9.69□□□□□ -0.86
GABRA1-205ENST00000519542 ATMINO43313 823 aaPredicted RBP9.68□□□□□ -0.86
GABRA1-205ENST00000519542 TRPC6Q9Y210 931 aa9.67□□□□□ -0.86
GABRA1-205ENST00000519542 FAM212AQ96EL1 285 aa9.65□□□□□ -0.86
GABRA1-205ENST00000519542 SGIP1Q9BQI5 828 aa9.64□□□□□ -0.87
GABRA1-205ENST00000519542 ATN1P54259 1190 aaPredicted RBP9.62□□□□□ -0.87
GABRA1-205ENST00000519542 BMP2KQ9NSY1 1161 aaPredicted RBP9.62□□□□□ -0.87
GABRA1-205ENST00000519542 POTEB2H3BUK9 544 aa9.61□□□□□ -0.87
GABRA1-205ENST00000519542 TIE1P35590 1138 aa9.61□□□□□ -0.87
GABRA1-205ENST00000519542 PCDHB13Q9Y5F0 798 aa9.59□□□□□ -0.87
GABRA1-205ENST00000519542 IFNLR1Q8IU57 520 aaPredicted RBP9.58□□□□□ -0.88
GABRA1-205ENST00000519542 KLHL34Q8N239 644 aa9.58□□□□□ -0.88
GABRA1-205ENST00000519542 SLC39A7Q92504 469 aa9.58□□□□□ -0.88
GABRA1-205ENST00000519542 C7P10643 843 aa9.57□□□□□ -0.88
GABRA1-205ENST00000519542 DCAF8Q5TAQ9 597 aa9.57□□□□□ -0.88
GABRA1-205ENST00000519542 IFNL1Q8IU54 200 aa9.57□□□□□ -0.88
GABRA1-205ENST00000519542 METRNQ9UJH8 293 aa9.57□□□□□ -0.88
GABRA1-205ENST00000519542 TTLL13PA6NNM8 815 aa9.56□□□□□ -0.88
GABRA1-205ENST00000519542 POTEFA5A3E0 1075 aa9.53□□□□□ -0.88
GABRA1-205ENST00000519542 PYGBP11216 843 aa9.53□□□□□ -0.88
GABRA1-205ENST00000519542 OTUD5Q96G74 571 aa9.52□□□□□ -0.89
GABRA1-205ENST00000519542 POTEJP0CG39 1038 aa9.51□□□□□ -0.89
GABRA1-205ENST00000519542 GSE1Q14687 1217 aa9.51□□□□□ -0.89
GABRA1-205ENST00000519542 SPOCK2Q92563 424 aa9.5□□□□□ -0.89
GABRA1-205ENST00000519542 CHRM1P11229 460 aaPredicted RBP9.48□□□□□ -0.89
GABRA1-205ENST00000519542 TRIM35Q9UPQ4 493 aa9.48□□□□□ -0.89
GABRA1-205ENST00000519542 TMEM106CQ9BVX2 250 aa9.46□□□□□ -0.9
GABRA1-205ENST00000519542 PCDHB8Q9UN66 801 aa9.46□□□□□ -0.9
GABRA1-205ENST00000519542 IER5LQ5T953 404 aa9.45□□□□□ -0.9
GABRA1-205ENST00000519542 COLQQ9Y215 455 aaPredicted RBP9.45□□□□□ -0.9
GABRA1-205ENST00000519542 ZNF467Q7Z7K2 595 aaPredicted RBP9.4□□□□□ -0.9
GABRA1-205ENST00000519542 CIZ1Q9ULV3 898 aaPredicted RBP9.38□□□□□ -0.91
GABRA1-205ENST00000519542 IRX5P78411 483 aaPredicted RBP9.37□□□□□ -0.91
GABRA1-205ENST00000519542 MAMSTRQ6ZN01 415 aa9.37□□□□□ -0.91
GABRA1-205ENST00000519542 SEC24BO95487 1268 aa9.36□□□□□ -0.91
GABRA1-205ENST00000519542 PSEN1P49768 467 aa9.33□□□□□ -0.92
GABRA1-205ENST00000519542 SCUBE2Q9NQ36 999 aa9.32□□□□□ -0.92
GABRA1-205ENST00000519542 TRIM41Q8WV44 630 aa9.31□□□□□ -0.92
GABRA1-205ENST00000519542 PLCG2P16885 1265 aa9.3□□□□□ -0.92
GABRA1-205ENST00000519542 PDAP1Q13442 181 aaKnown RBP9.3□□□□□ -0.92
GABRA1-205ENST00000519542 OCEL1Q9H607 264 aa9.3□□□□□ -0.92
GABRA1-205ENST00000519542 ILDR1Q86SU0 546 aaPredicted RBP9.26□□□□□ -0.93
GABRA1-205ENST00000519542 PDCD7Q8N8D1 485 aaKnown RBP9.26□□□□□ -0.93
GABRA1-205ENST00000519542 LCE2DQ5TA82 110 aaPredicted RBP9.24□□□□□ -0.93
GABRA1-205ENST00000519542 RNF25Q96BH1 459 aaPredicted RBP9.24□□□□□ -0.93
GABRA1-205ENST00000519542 MKRN3Q13064 507 aaKnown RBP9.22□□□□□ -0.93
GABRA1-205ENST00000519542 GOLGA2Q08379 1002 aa9.2□□□□□ -0.94
GABRA1-205ENST00000519542 CABP2Q9NPB3 220 aa9.2□□□□□ -0.94
GABRA1-205ENST00000519542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.19□□□□□ -0.94
GABRA1-205ENST00000519542 RIOK3O14730 519 aaKnown RBP9.18□□□□□ -0.94
GABRA1-205ENST00000519542 SLAIN1Q8ND83 568 aa9.17□□□□□ -0.94
GABRA1-205ENST00000519542 POTEMA6NI47 508 aa9.16□□□□□ -0.94
GABRA1-205ENST00000519542 DPY19L2Q6NUT2 758 aa9.14□□□□□ -0.95
GABRA1-205ENST00000519542 POTEGQ6S5H5 508 aa9.14□□□□□ -0.95
GABRA1-205ENST00000519542 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.13□□□□□ -0.95
GABRA1-205ENST00000519542 VGFO15240 615 aaPredicted RBP9.13□□□□□ -0.95
GABRA1-205ENST00000519542 FAM163AQ96GL9 167 aaPredicted RBP9.13□□□□□ -0.95
GABRA1-205ENST00000519542 L3MBTL3Q96JM7 780 aaPredicted RBP9.13□□□□□ -0.95
GABRA1-205ENST00000519542 ZFP91Q96JP5 570 aaPredicted RBP9.13□□□□□ -0.95
GABRA1-205ENST00000519542 PKD2Q13563 968 aa9.12□□□□□ -0.95
GABRA1-205ENST00000519542 EFCAB3Q8N7B9 438 aa9.12□□□□□ -0.95
GABRA1-205ENST00000519542 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.12□□□□□ -0.95
GABRA1-205ENST00000519542 ECM2O94769 699 aaPredicted RBP9.06□□□□□ -0.96
GABRA1-205ENST00000519542 C3orf67Q6ZVT6 689 aa9.06□□□□□ -0.96
GABRA1-205ENST00000519542 ST18O60284 1047 aa9.05□□□□□ -0.96
GABRA1-205ENST00000519542 MS4A4AQ96JQ5 239 aa9.05□□□□□ -0.96
GABRA1-205ENST00000519542 TMEM121BQ9BXQ6 578 aaPredicted RBP9.05□□□□□ -0.96
GABRA1-205ENST00000519542 BOLA1Q9Y3E2 137 aa9.05□□□□□ -0.96
GABRA1-205ENST00000519542 SOX12O15370 315 aa9.04□□□□□ -0.96
GABRA1-205ENST00000519542 RGL2O15211 777 aa9.03□□□□□ -0.96
GABRA1-205ENST00000519542 BCL11BQ9C0K0 894 aaPredicted RBP9.02□□□□□ -0.97
GABRA1-205ENST00000519542 PCDH10Q9P2E7 1040 aa9.01□□□□□ -0.97
GABRA1-205ENST00000519542 TAOK2Q9UL54 1235 aa9.01□□□□□ -0.97
GABRA1-205ENST00000519542 PHF8Q9UPP1 1060 aa9.01□□□□□ -0.97
GABRA1-205ENST00000519542 SNPHO15079 494 aa9□□□□□ -0.97
GABRA1-205ENST00000519542 FBXO22Q8NEZ5 403 aa8.99□□□□□ -0.97
GABRA1-205ENST00000519542 MICALL2Q8IY33 904 aa8.98□□□□□ -0.97
GABRA1-205ENST00000519542 STK24Q9Y6E0 443 aa8.98□□□□□ -0.97
GABRA1-205ENST00000519542 G3V3G9 751 aa8.97□□□□□ -0.97
GABRA1-205ENST00000519542 STK25O00506 426 aa8.96□□□□□ -0.98
GABRA1-205ENST00000519542 MFRPQ9BY79 579 aa8.96□□□□□ -0.98
GABRA1-205ENST00000519542 NLRP6P59044 892 aa8.95□□□□□ -0.98
GABRA1-205ENST00000519542 TMEM92Q6UXU6 159 aa8.95□□□□□ -0.98
GABRA1-205ENST00000519542 HOXB3P14651 431 aaPredicted RBP8.94□□□□□ -0.98
GABRA1-205ENST00000519542 PLSCR2Q9NRY7 297 aa8.92□□□□□ -0.98
GABRA1-205ENST00000519542 CDAN1Q8IWY9 1227 aa8.9□□□□□ -0.98
GABRA1-205ENST00000519542 MARVELD3Q96A59 401 aa8.89□□□□□ -0.99
GABRA1-205ENST00000519542 HS6ST3Q8IZP7 471 aa8.85□□□□□ -0.99
GABRA1-205ENST00000519542 POTEB3A0JP26 581 aa8.84□□□□□ -0.99
GABRA1-205ENST00000519542 POTEBQ6S5H4 581 aa8.84□□□□□ -0.99
GABRA1-205ENST00000519542 HOXB1P14653 301 aaPredicted RBP8.83□□□□□ -1
GABRA1-205ENST00000519542 EMP3P54852 163 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms