RNA–Protein interactions for RNA: ENST00000519515.1

VPS37A-205, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 266 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-205ENST00000519515 CCDC61Q9Y6R9 512 aa15.77■□□□□ 0.12
VPS37A-205ENST00000519515 NUBP1P53384 320 aa15.72■□□□□ 0.11
VPS37A-205ENST00000519515 VASPP50552 380 aaPredicted RBP15.7■□□□□ 0.1
VPS37A-205ENST00000519515 MS4A3Q96HJ5 214 aa15.7■□□□□ 0.1
VPS37A-205ENST00000519515 KIF12Q96FN5 646 aa15.67■□□□□ 0.1
VPS37A-205ENST00000519515 LHX8Q68G74 356 aa15.62■□□□□ 0.09
VPS37A-205ENST00000519515 KLHL34Q8N239 644 aa15.61■□□□□ 0.09
VPS37A-205ENST00000519515 MAP3K13O43283 966 aa15.6■□□□□ 0.09
VPS37A-205ENST00000519515 FAM212AQ96EL1 285 aa15.6■□□□□ 0.09
VPS37A-205ENST00000519515 DCAF8Q5TAQ9 597 aa15.55■□□□□ 0.08
VPS37A-205ENST00000519515 PELP1Q8IZL8 1130 aaKnown RBP15.53■□□□□ 0.08
VPS37A-205ENST00000519515 ASTLQ6HA08 431 aaPredicted RBP15.52■□□□□ 0.08
VPS37A-205ENST00000519515 ATMINO43313 823 aaPredicted RBP15.51■□□□□ 0.07
VPS37A-205ENST00000519515 TRPC6Q9Y210 931 aa15.5■□□□□ 0.07
VPS37A-205ENST00000519515 PCDHB13Q9Y5F0 798 aa15.48■□□□□ 0.07
VPS37A-205ENST00000519515 IFNLR1Q8IU57 520 aaPredicted RBP15.46■□□□□ 0.07
VPS37A-205ENST00000519515 SGIP1Q9BQI5 828 aa15.45■□□□□ 0.06
VPS37A-205ENST00000519515 ATN1P54259 1190 aaPredicted RBP15.43■□□□□ 0.06
VPS37A-205ENST00000519515 BMP2KQ9NSY1 1161 aaPredicted RBP15.43■□□□□ 0.06
VPS37A-205ENST00000519515 PYGBP11216 843 aa15.42■□□□□ 0.06
VPS37A-205ENST00000519515 TIE1P35590 1138 aa15.4■□□□□ 0.06
VPS37A-205ENST00000519515 IFNL1Q8IU54 200 aa15.4■□□□□ 0.06
VPS37A-205ENST00000519515 GSE1Q14687 1217 aa15.38■□□□□ 0.05
VPS37A-205ENST00000519515 SLC39A7Q92504 469 aa15.38■□□□□ 0.05
VPS37A-205ENST00000519515 METRNQ9UJH8 293 aa15.37■□□□□ 0.05
VPS37A-205ENST00000519515 C7P10643 843 aa15.36■□□□□ 0.05
VPS37A-205ENST00000519515 SPOCK2Q92563 424 aa15.36■□□□□ 0.05
VPS37A-205ENST00000519515 TTLL13PA6NNM8 815 aa15.34■□□□□ 0.05
VPS37A-205ENST00000519515 POTEB2H3BUK9 544 aa15.34■□□□□ 0.05
VPS37A-205ENST00000519515 PCDHB8Q9UN66 801 aa15.27■□□□□ 0.04
VPS37A-205ENST00000519515 TMEM106CQ9BVX2 250 aa15.26■□□□□ 0.03
VPS37A-205ENST00000519515 CIZ1Q9ULV3 898 aaPredicted RBP15.26■□□□□ 0.03
VPS37A-205ENST00000519515 TRIM35Q9UPQ4 493 aa15.25■□□□□ 0.03
VPS37A-205ENST00000519515 CHRM1P11229 460 aaPredicted RBP15.22■□□□□ 0.03
VPS37A-205ENST00000519515 OTUD5Q96G74 571 aa15.21■□□□□ 0.03
VPS37A-205ENST00000519515 POTEFA5A3E0 1075 aa15.19■□□□□ 0.02
VPS37A-205ENST00000519515 ZNF467Q7Z7K2 595 aaPredicted RBP15.17■□□□□ 0.02
VPS37A-205ENST00000519515 SEC24BO95487 1268 aa15.16■□□□□ 0.02
VPS37A-205ENST00000519515 POTEJP0CG39 1038 aa15.16■□□□□ 0.02
VPS37A-205ENST00000519515 COLQQ9Y215 455 aaPredicted RBP15.15■□□□□ 0.02
VPS37A-205ENST00000519515 IER5LQ5T953 404 aa15.14■□□□□ 0.01
VPS37A-205ENST00000519515 MAMSTRQ6ZN01 415 aa15.07■□□□□ 0
VPS37A-205ENST00000519515 PSEN1P49768 467 aa15.05■□□□□ -0
VPS37A-205ENST00000519515 PLCG2P16885 1265 aa15.01□□□□□ -0.01
VPS37A-205ENST00000519515 IRX5P78411 483 aaPredicted RBP15.01□□□□□ -0.01
VPS37A-205ENST00000519515 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
VPS37A-205ENST00000519515 SCUBE2Q9NQ36 999 aa15.01□□□□□ -0.01
VPS37A-205ENST00000519515 PDAP1Q13442 181 aaKnown RBP15□□□□□ -0.01
VPS37A-205ENST00000519515 GOLGA2Q08379 1002 aa14.97□□□□□ -0.01
VPS37A-205ENST00000519515 OCEL1Q9H607 264 aa14.96□□□□□ -0.01
VPS37A-205ENST00000519515 MKRN3Q13064 507 aaKnown RBP14.94□□□□□ -0.02
VPS37A-205ENST00000519515 CABP2Q9NPB3 220 aa14.87□□□□□ -0.03
VPS37A-205ENST00000519515 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.85□□□□□ -0.03
VPS37A-205ENST00000519515 PDCD7Q8N8D1 485 aaKnown RBP14.83□□□□□ -0.04
VPS37A-205ENST00000519515 RNF25Q96BH1 459 aaPredicted RBP14.83□□□□□ -0.04
VPS37A-205ENST00000519515 RIOK3O14730 519 aaKnown RBP14.82□□□□□ -0.04
VPS37A-205ENST00000519515 SLAIN1Q8ND83 568 aa14.78□□□□□ -0.04
VPS37A-205ENST00000519515 FAM163AQ96GL9 167 aaPredicted RBP14.76□□□□□ -0.05
VPS37A-205ENST00000519515 VGFO15240 615 aaPredicted RBP14.74□□□□□ -0.05
VPS37A-205ENST00000519515 ILDR1Q86SU0 546 aaPredicted RBP14.74□□□□□ -0.05
VPS37A-205ENST00000519515 L3MBTL3Q96JM7 780 aaPredicted RBP14.74□□□□□ -0.05
VPS37A-205ENST00000519515 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.73□□□□□ -0.05
VPS37A-205ENST00000519515 ECM2O94769 699 aaPredicted RBP14.73□□□□□ -0.05
VPS37A-205ENST00000519515 EFCAB3Q8N7B9 438 aa14.73□□□□□ -0.05
VPS37A-205ENST00000519515 ZFP91Q96JP5 570 aaPredicted RBP14.73□□□□□ -0.05
VPS37A-205ENST00000519515 DPY19L2Q6NUT2 758 aa14.72□□□□□ -0.05
VPS37A-205ENST00000519515 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.72□□□□□ -0.05
VPS37A-205ENST00000519515 PKD2Q13563 968 aa14.69□□□□□ -0.06
VPS37A-205ENST00000519515 POTEMA6NI47 508 aa14.67□□□□□ -0.06
VPS37A-205ENST00000519515 LCE2DQ5TA82 110 aaPredicted RBP14.66□□□□□ -0.06
VPS37A-205ENST00000519515 POTEGQ6S5H5 508 aa14.65□□□□□ -0.06
VPS37A-205ENST00000519515 C3orf67Q6ZVT6 689 aa14.65□□□□□ -0.06
VPS37A-205ENST00000519515 TAOK2Q9UL54 1235 aa14.64□□□□□ -0.07
VPS37A-205ENST00000519515 RGL2O15211 777 aa14.6□□□□□ -0.07
VPS37A-205ENST00000519515 BOLA1Q9Y3E2 137 aa14.6□□□□□ -0.07
VPS37A-205ENST00000519515 G3V3G9 751 aa14.59□□□□□ -0.07
VPS37A-205ENST00000519515 SOX12O15370 315 aa14.59□□□□□ -0.07
VPS37A-205ENST00000519515 BCL11BQ9C0K0 894 aaPredicted RBP14.59□□□□□ -0.07
VPS37A-205ENST00000519515 STK24Q9Y6E0 443 aa14.57□□□□□ -0.08
VPS37A-205ENST00000519515 PHF8Q9UPP1 1060 aa14.55□□□□□ -0.08
VPS37A-205ENST00000519515 STK25O00506 426 aa14.54□□□□□ -0.08
VPS37A-205ENST00000519515 ST18O60284 1047 aa14.52□□□□□ -0.09
VPS37A-205ENST00000519515 SNPHO15079 494 aa14.51□□□□□ -0.09
VPS37A-205ENST00000519515 MS4A4AQ96JQ5 239 aa14.5□□□□□ -0.09
VPS37A-205ENST00000519515 TMEM121BQ9BXQ6 578 aaPredicted RBP14.49□□□□□ -0.09
VPS37A-205ENST00000519515 NLRP6P59044 892 aa14.45□□□□□ -0.1
VPS37A-205ENST00000519515 MICALL2Q8IY33 904 aa14.43□□□□□ -0.1
VPS37A-205ENST00000519515 FBXO22Q8NEZ5 403 aa14.42□□□□□ -0.1
VPS37A-205ENST00000519515 MFRPQ9BY79 579 aa14.41□□□□□ -0.1
VPS37A-205ENST00000519515 PCDH10Q9P2E7 1040 aa14.4□□□□□ -0.1
VPS37A-205ENST00000519515 PLSCR2Q9NRY7 297 aa14.37□□□□□ -0.11
VPS37A-205ENST00000519515 TMEM92Q6UXU6 159 aa14.33□□□□□ -0.12
VPS37A-205ENST00000519515 MARVELD3Q96A59 401 aa14.33□□□□□ -0.12
VPS37A-205ENST00000519515 CDAN1Q8IWY9 1227 aa14.3□□□□□ -0.12
VPS37A-205ENST00000519515 HOXB3P14651 431 aaPredicted RBP14.29□□□□□ -0.12
VPS37A-205ENST00000519515 HS6ST3Q8IZP7 471 aa14.26□□□□□ -0.13
VPS37A-205ENST00000519515 CHGAP10645 457 aaKnown RBP14.25□□□□□ -0.13
VPS37A-205ENST00000519515 ZNF710Q8N1W2 664 aa14.24□□□□□ -0.13
VPS37A-205ENST00000519515 EMP3P54852 163 aa14.23□□□□□ -0.13
VPS37A-205ENST00000519515 DOK7Q18PE1 504 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms