RNA–Protein interactions for RNA: ENST00000519336.1

LINC01339-203, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3 BASIC

Gene LINC01339, Length 561 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-203ENST00000519336 FAM212AQ96EL1 285 aa11.3□□□□□ -0.6
LINC01339-203ENST00000519336 PITPNM1O00562 1244 aa11.28□□□□□ -0.6
LINC01339-203ENST00000519336 RNF25Q96BH1 459 aaPredicted RBP11.25□□□□□ -0.61
LINC01339-203ENST00000519336 MNX1P50219 401 aaPredicted RBP11.24□□□□□ -0.61
LINC01339-203ENST00000519336 RIOK3O14730 519 aaKnown RBP11.22□□□□□ -0.61
LINC01339-203ENST00000519336 RASEFQ8IZ41 740 aa11.22□□□□□ -0.61
LINC01339-203ENST00000519336 HS6ST3Q8IZP7 471 aa11.22□□□□□ -0.61
LINC01339-203ENST00000519336 TAOK2Q9UL54 1235 aa11.22□□□□□ -0.61
LINC01339-203ENST00000519336 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
LINC01339-203ENST00000519336 BCANQ96GW7 911 aa11.18□□□□□ -0.62
LINC01339-203ENST00000519336 KDM2AQ9Y2K7 1162 aa11.18□□□□□ -0.62
LINC01339-203ENST00000519336 CHADLQ6NUI6 762 aa11.16□□□□□ -0.62
LINC01339-203ENST00000519336 STK25O00506 426 aa11.15□□□□□ -0.62
LINC01339-203ENST00000519336 PYGBP11216 843 aa11.15□□□□□ -0.62
LINC01339-203ENST00000519336 VGFO15240 615 aaPredicted RBP11.13□□□□□ -0.63
LINC01339-203ENST00000519336 CHRM1P11229 460 aaPredicted RBP11.11□□□□□ -0.63
LINC01339-203ENST00000519336 TSPYL2Q9H2G4 693 aaPredicted RBP11.1□□□□□ -0.63
LINC01339-203ENST00000519336 STK24Q9Y6E0 443 aa11.08□□□□□ -0.64
LINC01339-203ENST00000519336 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.06□□□□□ -0.64
LINC01339-203ENST00000519336 NKX1-1Q15270 411 aaPredicted RBP11.06□□□□□ -0.64
LINC01339-203ENST00000519336 ZFP91Q96JP5 570 aaPredicted RBP11.06□□□□□ -0.64
LINC01339-203ENST00000519336 BCL11BQ9C0K0 894 aaPredicted RBP11.05□□□□□ -0.64
LINC01339-203ENST00000519336 FARP1Q9Y4F1 1045 aaPredicted RBP11.05□□□□□ -0.64
LINC01339-203ENST00000519336 DNAJC5Q9H3Z4 198 aa11.04□□□□□ -0.64
LINC01339-203ENST00000519336 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
LINC01339-203ENST00000519336 GTPBP6O43824 516 aaPredicted RBP11□□□□□ -0.65
LINC01339-203ENST00000519336 SGIP1Q9BQI5 828 aa10.98□□□□□ -0.65
LINC01339-203ENST00000519336 ZNF467Q7Z7K2 595 aaPredicted RBP10.96□□□□□ -0.65
LINC01339-203ENST00000519336 PRKCSHP14314 528 aaPredicted RBP10.95□□□□□ -0.66
LINC01339-203ENST00000519336 PAK3O75914 559 aaPredicted RBP10.93□□□□□ -0.66
LINC01339-203ENST00000519336 RYDENQ9NUL5 291 aaKnown RBP10.93□□□□□ -0.66
LINC01339-203ENST00000519336 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
LINC01339-203ENST00000519336 PCDHB13Q9Y5F0 798 aa10.93□□□□□ -0.66
LINC01339-203ENST00000519336 FXR2P51116 673 aaKnown RBP eCLIP10.92□□□□□ -0.66
LINC01339-203ENST00000519336 PDAP1Q13442 181 aaKnown RBP10.9□□□□□ -0.66
LINC01339-203ENST00000519336 NBR1Q14596 966 aa10.9□□□□□ -0.66
LINC01339-203ENST00000519336 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
LINC01339-203ENST00000519336 CCDC61Q9Y6R9 512 aa10.89□□□□□ -0.67
LINC01339-203ENST00000519336 TPRNQ4KMQ1 711 aa10.87□□□□□ -0.67
LINC01339-203ENST00000519336 PSEN1P49768 467 aa10.85□□□□□ -0.67
LINC01339-203ENST00000519336 PIP4P2Q8N4L2 257 aa10.85□□□□□ -0.67
LINC01339-203ENST00000519336 ZNF579Q8NAF0 562 aaKnown RBP10.84□□□□□ -0.67
LINC01339-203ENST00000519336 MAP3K13O43283 966 aa10.8□□□□□ -0.68
LINC01339-203ENST00000519336 IFNL1Q8IU54 200 aa10.8□□□□□ -0.68
LINC01339-203ENST00000519336 ZRANB1Q9UGI0 708 aa10.78□□□□□ -0.68
LINC01339-203ENST00000519336 KIF12Q96FN5 646 aa10.76□□□□□ -0.69
LINC01339-203ENST00000519336 CD44P16070 742 aaKnown RBP10.75□□□□□ -0.69
LINC01339-203ENST00000519336 CABP2Q9NPB3 220 aa10.75□□□□□ -0.69
LINC01339-203ENST00000519336 MFRPQ9BY79 579 aa10.74□□□□□ -0.69
LINC01339-203ENST00000519336 WDR70Q9NW82 654 aa10.74□□□□□ -0.69
LINC01339-203ENST00000519336 EFCAB3Q8N7B9 438 aa10.72□□□□□ -0.69
LINC01339-203ENST00000519336 PHF12Q96QT6 1004 aa10.71□□□□□ -0.69
LINC01339-203ENST00000519336 CADPS2Q86UW7 1296 aa10.7□□□□□ -0.7
LINC01339-203ENST00000519336 NLRP6P59044 892 aa10.68□□□□□ -0.7
LINC01339-203ENST00000519336 P3H3Q8IVL6 736 aa10.66□□□□□ -0.7
LINC01339-203ENST00000519336 PHF8Q9UPP1 1060 aa10.66□□□□□ -0.7
LINC01339-203ENST00000519336 SOX12O15370 315 aa10.65□□□□□ -0.7
LINC01339-203ENST00000519336 PPP1R37O75864 691 aa10.65□□□□□ -0.7
LINC01339-203ENST00000519336 GOLGA2Q08379 1002 aa10.65□□□□□ -0.7
LINC01339-203ENST00000519336 FBXO22Q8NEZ5 403 aa10.61□□□□□ -0.71
LINC01339-203ENST00000519336 TMEM106CQ9BVX2 250 aa10.61□□□□□ -0.71
LINC01339-203ENST00000519336 KCNV2Q8TDN2 545 aa10.59□□□□□ -0.71
LINC01339-203ENST00000519336 MS4A3Q96HJ5 214 aa10.58□□□□□ -0.72
LINC01339-203ENST00000519336 MKRN3Q13064 507 aaKnown RBP10.55□□□□□ -0.72
LINC01339-203ENST00000519336 TRPC6Q9Y210 931 aa10.55□□□□□ -0.72
LINC01339-203ENST00000519336 C19orf67A6NJJ6 358 aa10.53□□□□□ -0.72
LINC01339-203ENST00000519336 MS4A4AQ96JQ5 239 aa10.51□□□□□ -0.73
LINC01339-203ENST00000519336 E2F4Q16254 413 aa10.5□□□□□ -0.73
LINC01339-203ENST00000519336 LARP6Q9BRS8 491 aaKnown RBP10.49□□□□□ -0.73
LINC01339-203ENST00000519336 PDE4AP27815 886 aa10.47□□□□□ -0.73
LINC01339-203ENST00000519336 TULP1O00294 542 aaPredicted RBP10.46□□□□□ -0.73
LINC01339-203ENST00000519336 ARHGEF1Q92888 912 aaKnown RBP10.46□□□□□ -0.73
LINC01339-203ENST00000519336 NCKAP5LQ9HCH0 1330 aa10.45□□□□□ -0.74
LINC01339-203ENST00000519336 TTLL13PA6NNM8 815 aa10.45□□□□□ -0.74
LINC01339-203ENST00000519336 TIE1P35590 1138 aa10.45□□□□□ -0.74
LINC01339-203ENST00000519336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.45□□□□□ -0.74
LINC01339-203ENST00000519336 HAX1O00165 279 aa10.44□□□□□ -0.74
LINC01339-203ENST00000519336 LMOD2Q6P5Q4 547 aa10.43□□□□□ -0.74
LINC01339-203ENST00000519336 GALR2O43603 387 aaPredicted RBP10.41□□□□□ -0.74
LINC01339-203ENST00000519336 DDX27Q96GQ7 796 aaKnown RBP10.41□□□□□ -0.74
LINC01339-203ENST00000519336 BMP2KQ9NSY1 1161 aaPredicted RBP10.41□□□□□ -0.74
LINC01339-203ENST00000519336 TRIM35Q9UPQ4 493 aa10.41□□□□□ -0.74
LINC01339-203ENST00000519336 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.4□□□□□ -0.74
LINC01339-203ENST00000519336 SEMA3EO15041 775 aa10.38□□□□□ -0.75
LINC01339-203ENST00000519336 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
LINC01339-203ENST00000519336 MFSD10Q14728 455 aa10.36□□□□□ -0.75
LINC01339-203ENST00000519336 DPY19L2Q6NUT2 758 aa10.34□□□□□ -0.75
LINC01339-203ENST00000519336 EVX2Q03828 476 aa10.33□□□□□ -0.76
LINC01339-203ENST00000519336 TESPA1A2RU30 521 aaPredicted RBP10.31□□□□□ -0.76
LINC01339-203ENST00000519336 ATN1P54259 1190 aaPredicted RBP10.3□□□□□ -0.76
LINC01339-203ENST00000519336 PPP1R15BQ5SWA1 713 aa10.3□□□□□ -0.76
LINC01339-203ENST00000519336 G3V3G9 751 aa10.29□□□□□ -0.76
LINC01339-203ENST00000519336 SMYD5Q6GMV2 418 aa10.29□□□□□ -0.76
LINC01339-203ENST00000519336 ILDR1Q86SU0 546 aaPredicted RBP10.29□□□□□ -0.76
LINC01339-203ENST00000519336 GPHNQ9NQX3 736 aaPredicted RBP10.29□□□□□ -0.76
LINC01339-203ENST00000519336 CLCN6P51797 869 aa10.28□□□□□ -0.76
LINC01339-203ENST00000519336 MICALL2Q8IY33 904 aa10.27□□□□□ -0.77
LINC01339-203ENST00000519336 TMC2Q8TDI7 906 aa10.27□□□□□ -0.77
LINC01339-203ENST00000519336 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
LINC01339-203ENST00000519336 ZC3H15Q8WU90 426 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms