RNA–Protein interactions for RNA: ENST00000518962.1

LINC00293-202, long intergenic non-protein coding RNA 293, humanhuman

TSL 3

Gene LINC00293, Length 706 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00293-202ENST00000518962 TSPYL2Q9H2G4 693 aaPredicted RBP11.64□□□□□ -0.55
LINC00293-202ENST00000518962 RNF25Q96BH1 459 aaPredicted RBP11.6□□□□□ -0.55
LINC00293-202ENST00000518962 PYGBP11216 843 aa11.58□□□□□ -0.56
LINC00293-202ENST00000518962 PAK3O75914 559 aaPredicted RBP11.57□□□□□ -0.56
LINC00293-202ENST00000518962 CHRM1P11229 460 aaPredicted RBP11.56□□□□□ -0.56
LINC00293-202ENST00000518962 CCDC61Q9Y6R9 512 aa11.56□□□□□ -0.56
LINC00293-202ENST00000518962 CD44P16070 742 aaKnown RBP11.55□□□□□ -0.56
LINC00293-202ENST00000518962 RIOK3O14730 519 aaKnown RBP11.52□□□□□ -0.57
LINC00293-202ENST00000518962 C19orf67A6NJJ6 358 aa11.49□□□□□ -0.57
LINC00293-202ENST00000518962 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
LINC00293-202ENST00000518962 VGFO15240 615 aaPredicted RBP11.44□□□□□ -0.58
LINC00293-202ENST00000518962 CHGAP10645 457 aaKnown RBP11.44□□□□□ -0.58
LINC00293-202ENST00000518962 ZNF467Q7Z7K2 595 aaPredicted RBP11.43□□□□□ -0.58
LINC00293-202ENST00000518962 PHF12Q96QT6 1004 aa11.43□□□□□ -0.58
LINC00293-202ENST00000518962 TAOK2Q9UL54 1235 aa11.43□□□□□ -0.58
LINC00293-202ENST00000518962 ZNF579Q8NAF0 562 aaKnown RBP11.42□□□□□ -0.58
LINC00293-202ENST00000518962 KIF12Q96FN5 646 aa11.42□□□□□ -0.58
LINC00293-202ENST00000518962 MAP3K13O43283 966 aa11.41□□□□□ -0.58
LINC00293-202ENST00000518962 HS6ST3Q8IZP7 471 aa11.41□□□□□ -0.58
LINC00293-202ENST00000518962 PCDHB8Q9UN66 801 aa11.4□□□□□ -0.58
LINC00293-202ENST00000518962 PCDHB13Q9Y5F0 798 aa11.4□□□□□ -0.58
LINC00293-202ENST00000518962 HAX1O00165 279 aa11.39□□□□□ -0.59
LINC00293-202ENST00000518962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.38□□□□□ -0.59
LINC00293-202ENST00000518962 ZFP91Q96JP5 570 aaPredicted RBP11.38□□□□□ -0.59
LINC00293-202ENST00000518962 POTEHQ6S545 545 aa11.37□□□□□ -0.59
LINC00293-202ENST00000518962 IFNL1Q8IU54 200 aa11.37□□□□□ -0.59
LINC00293-202ENST00000518962 BBXQ8WY36 941 aaPredicted RBP11.37□□□□□ -0.59
LINC00293-202ENST00000518962 SGIP1Q9BQI5 828 aa11.37□□□□□ -0.59
LINC00293-202ENST00000518962 STK25O00506 426 aa11.36□□□□□ -0.59
LINC00293-202ENST00000518962 PDAP1Q13442 181 aaKnown RBP11.34□□□□□ -0.59
LINC00293-202ENST00000518962 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
LINC00293-202ENST00000518962 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
LINC00293-202ENST00000518962 PLCB2Q00722 1185 aa11.33□□□□□ -0.6
LINC00293-202ENST00000518962 EVX2Q03828 476 aa11.33□□□□□ -0.6
LINC00293-202ENST00000518962 MS4A3Q96HJ5 214 aa11.31□□□□□ -0.6
LINC00293-202ENST00000518962 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.31□□□□□ -0.6
LINC00293-202ENST00000518962 STK24Q9Y6E0 443 aa11.31□□□□□ -0.6
LINC00293-202ENST00000518962 PSEN1P49768 467 aa11.3□□□□□ -0.6
LINC00293-202ENST00000518962 DNAJC5Q9H3Z4 198 aa11.3□□□□□ -0.6
LINC00293-202ENST00000518962 NKX1-1Q15270 411 aaPredicted RBP11.26□□□□□ -0.61
LINC00293-202ENST00000518962 PAXIP1Q6ZW49 1069 aaPredicted RBP11.24□□□□□ -0.61
LINC00293-202ENST00000518962 TRPC6Q9Y210 931 aa11.23□□□□□ -0.61
LINC00293-202ENST00000518962 GALR2O43603 387 aaPredicted RBP11.22□□□□□ -0.61
LINC00293-202ENST00000518962 CFAP44Q96MT7 982 aa11.22□□□□□ -0.61
LINC00293-202ENST00000518962 SPRYD3Q8NCJ5 442 aa11.2□□□□□ -0.62
LINC00293-202ENST00000518962 CLCN6P51797 869 aa11.18□□□□□ -0.62
LINC00293-202ENST00000518962 TMEM106CQ9BVX2 250 aa11.18□□□□□ -0.62
LINC00293-202ENST00000518962 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
LINC00293-202ENST00000518962 TIE1P35590 1138 aa11.15□□□□□ -0.62
LINC00293-202ENST00000518962 HAP1P54257 671 aaPredicted RBP11.15□□□□□ -0.62
LINC00293-202ENST00000518962 GTPBP6O43824 516 aaPredicted RBP11.14□□□□□ -0.63
LINC00293-202ENST00000518962 BMP2KQ9NSY1 1161 aaPredicted RBP11.14□□□□□ -0.63
LINC00293-202ENST00000518962 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
LINC00293-202ENST00000518962 EFCAB3Q8N7B9 438 aa11.13□□□□□ -0.63
LINC00293-202ENST00000518962 GABBR2O75899 941 aa11.11□□□□□ -0.63
LINC00293-202ENST00000518962 MFRPQ9BY79 579 aa11.1□□□□□ -0.63
LINC00293-202ENST00000518962 RYDENQ9NUL5 291 aaKnown RBP11.1□□□□□ -0.63
LINC00293-202ENST00000518962 GOLGA2Q08379 1002 aa11.08□□□□□ -0.64
LINC00293-202ENST00000518962 SOX12O15370 315 aa11.05□□□□□ -0.64
LINC00293-202ENST00000518962 PHF8Q9UPP1 1060 aa11.05□□□□□ -0.64
LINC00293-202ENST00000518962 TRIM35Q9UPQ4 493 aa11.05□□□□□ -0.64
LINC00293-202ENST00000518962 FBXO22Q8NEZ5 403 aa11.04□□□□□ -0.64
LINC00293-202ENST00000518962 SP7Q8TDD2 431 aaPredicted RBP11.04□□□□□ -0.64
LINC00293-202ENST00000518962 TSHZ2Q9NRE2 1034 aa11.04□□□□□ -0.64
LINC00293-202ENST00000518962 ATMINO43313 823 aaPredicted RBP11.03□□□□□ -0.64
LINC00293-202ENST00000518962 ATN1P54259 1190 aaPredicted RBP11.03□□□□□ -0.64
LINC00293-202ENST00000518962 ASTLQ6HA08 431 aaPredicted RBP11.03□□□□□ -0.64
LINC00293-202ENST00000518962 NLRP6P59044 892 aa11.02□□□□□ -0.65
LINC00293-202ENST00000518962 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.65
LINC00293-202ENST00000518962 MS4A4AQ96JQ5 239 aa10.98□□□□□ -0.65
LINC00293-202ENST00000518962 DCBLD2Q96PD2 775 aa10.98□□□□□ -0.65
LINC00293-202ENST00000518962 VSIG10Q8N0Z9 540 aa10.96□□□□□ -0.65
LINC00293-202ENST00000518962 PPP1R37O75864 691 aa10.95□□□□□ -0.66
LINC00293-202ENST00000518962 ILDR1Q86SU0 546 aaPredicted RBP10.95□□□□□ -0.66
LINC00293-202ENST00000518962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.95□□□□□ -0.66
LINC00293-202ENST00000518962 IER5LQ5T953 404 aa10.93□□□□□ -0.66
LINC00293-202ENST00000518962 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
LINC00293-202ENST00000518962 PELP1Q8IZL8 1130 aaKnown RBP10.91□□□□□ -0.66
LINC00293-202ENST00000518962 POTEIP0CG38 1075 aa10.9□□□□□ -0.66
LINC00293-202ENST00000518962 IRX5P78411 483 aaPredicted RBP10.9□□□□□ -0.66
LINC00293-202ENST00000518962 PDCD7Q8N8D1 485 aaKnown RBP10.89□□□□□ -0.67
LINC00293-202ENST00000518962 CADPS2Q86UW7 1296 aa10.87□□□□□ -0.67
LINC00293-202ENST00000518962 OCEL1Q9H607 264 aa10.86□□□□□ -0.67
LINC00293-202ENST00000518962 DPY19L2Q6NUT2 758 aa10.85□□□□□ -0.67
LINC00293-202ENST00000518962 SLC39A7Q92504 469 aa10.85□□□□□ -0.67
LINC00293-202ENST00000518962 PLCG2P16885 1265 aa10.84□□□□□ -0.67
LINC00293-202ENST00000518962 METRNQ9UJH8 293 aa10.82□□□□□ -0.68
LINC00293-202ENST00000518962 COLQQ9Y215 455 aaPredicted RBP10.82□□□□□ -0.68
LINC00293-202ENST00000518962 SEC24BO95487 1268 aa10.81□□□□□ -0.68
LINC00293-202ENST00000518962 C7P10643 843 aa10.81□□□□□ -0.68
LINC00293-202ENST00000518962 POTEFA5A3E0 1075 aa10.78□□□□□ -0.68
LINC00293-202ENST00000518962 MICALL2Q8IY33 904 aa10.78□□□□□ -0.68
LINC00293-202ENST00000518962 BOLA1Q9Y3E2 137 aa10.75□□□□□ -0.69
LINC00293-202ENST00000518962 NCKAP5LQ9HCH0 1330 aa10.75□□□□□ -0.69
LINC00293-202ENST00000518962 TMEM121BQ9BXQ6 578 aaPredicted RBP10.73□□□□□ -0.69
LINC00293-202ENST00000518962 CRISPLD2Q9H0B8 497 aa10.73□□□□□ -0.69
LINC00293-202ENST00000518962 G3V3G9 751 aa10.72□□□□□ -0.69
LINC00293-202ENST00000518962 L3MBTL3Q96JM7 780 aaPredicted RBP10.71□□□□□ -0.69
LINC00293-202ENST00000518962 WDR70Q9NW82 654 aa10.69□□□□□ -0.7
LINC00293-202ENST00000518962 PDE4AP27815 886 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms