RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 MNX1P50219 401 aaPredicted RBP10□□□□□ -0.81
VPS13B-207ENST00000518569 PHF12Q96QT6 1004 aa10□□□□□ -0.81
VPS13B-207ENST00000518569 GALR2O43603 387 aaPredicted RBP9.96□□□□□ -0.82
VPS13B-207ENST00000518569 POTEIP0CG38 1075 aa9.96□□□□□ -0.82
VPS13B-207ENST00000518569 LHX8Q68G74 356 aa9.96□□□□□ -0.82
VPS13B-207ENST00000518569 NUBP1P53384 320 aa9.95□□□□□ -0.82
VPS13B-207ENST00000518569 PKD2Q13563 968 aa9.95□□□□□ -0.82
VPS13B-207ENST00000518569 TSPYL2Q9H2G4 693 aaPredicted RBP9.95□□□□□ -0.82
VPS13B-207ENST00000518569 GSE1Q14687 1217 aa9.9□□□□□ -0.82
VPS13B-207ENST00000518569 TRIM41Q8WV44 630 aa9.89□□□□□ -0.83
VPS13B-207ENST00000518569 CIZ1Q9ULV3 898 aaPredicted RBP9.88□□□□□ -0.83
VPS13B-207ENST00000518569 FAM212AQ96EL1 285 aa9.86□□□□□ -0.83
VPS13B-207ENST00000518569 MS4A3Q96HJ5 214 aa9.86□□□□□ -0.83
VPS13B-207ENST00000518569 ECM2O94769 699 aaPredicted RBP9.85□□□□□ -0.83
VPS13B-207ENST00000518569 DCAF8Q5TAQ9 597 aa9.84□□□□□ -0.83
VPS13B-207ENST00000518569 RASEFQ8IZ41 740 aa9.83□□□□□ -0.84
VPS13B-207ENST00000518569 CCDC61Q9Y6R9 512 aa9.81□□□□□ -0.84
VPS13B-207ENST00000518569 CHRM1P11229 460 aaPredicted RBP9.77□□□□□ -0.85
VPS13B-207ENST00000518569 KIF12Q96FN5 646 aa9.75□□□□□ -0.85
VPS13B-207ENST00000518569 RGL2O15211 777 aa9.74□□□□□ -0.85
VPS13B-207ENST00000518569 PELP1Q8IZL8 1130 aaKnown RBP9.73□□□□□ -0.85
VPS13B-207ENST00000518569 MAP3K13O43283 966 aa9.72□□□□□ -0.85
VPS13B-207ENST00000518569 ATMINO43313 823 aaPredicted RBP9.72□□□□□ -0.85
VPS13B-207ENST00000518569 ASTLQ6HA08 431 aaPredicted RBP9.72□□□□□ -0.85
VPS13B-207ENST00000518569 METRNQ9UJH8 293 aa9.71□□□□□ -0.86
VPS13B-207ENST00000518569 DCAF8L2P0C7V8 631 aa9.7□□□□□ -0.86
VPS13B-207ENST00000518569 SLC39A7Q92504 469 aa9.7□□□□□ -0.86
VPS13B-207ENST00000518569 TAOK2Q9UL54 1235 aa9.68□□□□□ -0.86
VPS13B-207ENST00000518569 PYGBP11216 843 aa9.67□□□□□ -0.86
VPS13B-207ENST00000518569 ATN1P54259 1190 aaPredicted RBP9.67□□□□□ -0.86
VPS13B-207ENST00000518569 TRPC6Q9Y210 931 aa9.67□□□□□ -0.86
VPS13B-207ENST00000518569 PCDHB13Q9Y5F0 798 aa9.67□□□□□ -0.86
VPS13B-207ENST00000518569 RIOK3O14730 519 aaKnown RBP9.66□□□□□ -0.86
VPS13B-207ENST00000518569 C7P10643 843 aa9.66□□□□□ -0.86
VPS13B-207ENST00000518569 RNF25Q96BH1 459 aaPredicted RBP9.66□□□□□ -0.86
VPS13B-207ENST00000518569 BMP2KQ9NSY1 1161 aaPredicted RBP9.66□□□□□ -0.86
VPS13B-207ENST00000518569 POTEB2H3BUK9 544 aa9.65□□□□□ -0.86
VPS13B-207ENST00000518569 TIE1P35590 1138 aa9.63□□□□□ -0.87
VPS13B-207ENST00000518569 SGIP1Q9BQI5 828 aa9.62□□□□□ -0.87
VPS13B-207ENST00000518569 VGFO15240 615 aaPredicted RBP9.61□□□□□ -0.87
VPS13B-207ENST00000518569 ZNF467Q7Z7K2 595 aaPredicted RBP9.61□□□□□ -0.87
VPS13B-207ENST00000518569 OTUD5Q96G74 571 aa9.61□□□□□ -0.87
VPS13B-207ENST00000518569 TTLL13PA6NNM8 815 aa9.59□□□□□ -0.87
VPS13B-207ENST00000518569 IFNL1Q8IU54 200 aa9.58□□□□□ -0.88
VPS13B-207ENST00000518569 BBXQ8WY36 941 aaPredicted RBP9.58□□□□□ -0.88
VPS13B-207ENST00000518569 SEC24BO95487 1268 aa9.57□□□□□ -0.88
VPS13B-207ENST00000518569 CHGAP10645 457 aaKnown RBP9.57□□□□□ -0.88
VPS13B-207ENST00000518569 HS6ST3Q8IZP7 471 aa9.57□□□□□ -0.88
VPS13B-207ENST00000518569 MAMSTRQ6ZN01 415 aa9.55□□□□□ -0.88
VPS13B-207ENST00000518569 DNAJC5Q9H3Z4 198 aa9.55□□□□□ -0.88
VPS13B-207ENST00000518569 TRIM35Q9UPQ4 493 aa9.55□□□□□ -0.88
VPS13B-207ENST00000518569 TMEM106CQ9BVX2 250 aa9.54□□□□□ -0.88
VPS13B-207ENST00000518569 SCUBE2Q9NQ36 999 aa9.54□□□□□ -0.88
VPS13B-207ENST00000518569 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.53□□□□□ -0.88
VPS13B-207ENST00000518569 PDAP1Q13442 181 aaKnown RBP9.52□□□□□ -0.89
VPS13B-207ENST00000518569 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.51□□□□□ -0.89
VPS13B-207ENST00000518569 PLCB2Q00722 1185 aa9.51□□□□□ -0.89
VPS13B-207ENST00000518569 ZFP91Q96JP5 570 aaPredicted RBP9.51□□□□□ -0.89
VPS13B-207ENST00000518569 PCDHB8Q9UN66 801 aa9.51□□□□□ -0.89
VPS13B-207ENST00000518569 STK25O00506 426 aa9.5□□□□□ -0.89
VPS13B-207ENST00000518569 POTEJP0CG39 1038 aa9.5□□□□□ -0.89
VPS13B-207ENST00000518569 SLC24A1O60721 1099 aa9.49□□□□□ -0.89
VPS13B-207ENST00000518569 POTEFA5A3E0 1075 aa9.48□□□□□ -0.89
VPS13B-207ENST00000518569 COLQQ9Y215 455 aaPredicted RBP9.48□□□□□ -0.89
VPS13B-207ENST00000518569 PSEN1P49768 467 aa9.47□□□□□ -0.89
VPS13B-207ENST00000518569 IER5LQ5T953 404 aa9.47□□□□□ -0.89
VPS13B-207ENST00000518569 BCL11BQ9C0K0 894 aaPredicted RBP9.47□□□□□ -0.89
VPS13B-207ENST00000518569 STK24Q9Y6E0 443 aa9.46□□□□□ -0.9
VPS13B-207ENST00000518569 PLCG2P16885 1265 aa9.45□□□□□ -0.9
VPS13B-207ENST00000518569 SPRYD3Q8NCJ5 442 aa9.43□□□□□ -0.9
VPS13B-207ENST00000518569 PAXIP1Q6ZW49 1069 aaPredicted RBP9.41□□□□□ -0.9
VPS13B-207ENST00000518569 GOLGA2Q08379 1002 aa9.4□□□□□ -0.9
VPS13B-207ENST00000518569 NKX1-1Q15270 411 aaPredicted RBP9.4□□□□□ -0.9
VPS13B-207ENST00000518569 POTEMA6NI47 508 aa9.39□□□□□ -0.91
VPS13B-207ENST00000518569 RYDENQ9NUL5 291 aaKnown RBP9.39□□□□□ -0.91
VPS13B-207ENST00000518569 FAM163AQ96GL9 167 aaPredicted RBP9.38□□□□□ -0.91
VPS13B-207ENST00000518569 CFAP44Q96MT7 982 aa9.38□□□□□ -0.91
VPS13B-207ENST00000518569 POTEGQ6S5H5 508 aa9.37□□□□□ -0.91
VPS13B-207ENST00000518569 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
VPS13B-207ENST00000518569 GTPBP6O43824 516 aaPredicted RBP9.35□□□□□ -0.91
VPS13B-207ENST00000518569 IRX5P78411 483 aaPredicted RBP9.35□□□□□ -0.91
VPS13B-207ENST00000518569 MKRN3Q13064 507 aaKnown RBP9.34□□□□□ -0.91
VPS13B-207ENST00000518569 OCEL1Q9H607 264 aa9.34□□□□□ -0.91
VPS13B-207ENST00000518569 SLAIN1Q8ND83 568 aa9.33□□□□□ -0.92
VPS13B-207ENST00000518569 CABP2Q9NPB3 220 aa9.33□□□□□ -0.92
VPS13B-207ENST00000518569 SOX12O15370 315 aa9.32□□□□□ -0.92
VPS13B-207ENST00000518569 HAP1P54257 671 aaPredicted RBP9.32□□□□□ -0.92
VPS13B-207ENST00000518569 EFCAB3Q8N7B9 438 aa9.31□□□□□ -0.92
VPS13B-207ENST00000518569 MFRPQ9BY79 579 aa9.28□□□□□ -0.92
VPS13B-207ENST00000518569 NLRP6P59044 892 aa9.27□□□□□ -0.93
VPS13B-207ENST00000518569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.27□□□□□ -0.932e-7■■■■■ 28.3
VPS13B-207ENST00000518569 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.27□□□□□ -0.93
VPS13B-207ENST00000518569 VSIG10Q8N0Z9 540 aa9.26□□□□□ -0.93
VPS13B-207ENST00000518569 LCE2DQ5TA82 110 aaPredicted RBP9.25□□□□□ -0.93
VPS13B-207ENST00000518569 FBXO22Q8NEZ5 403 aa9.25□□□□□ -0.93
VPS13B-207ENST00000518569 C3orf67Q6ZVT6 689 aa9.24□□□□□ -0.93
VPS13B-207ENST00000518569 TSHZ2Q9NRE2 1034 aa9.23□□□□□ -0.93
VPS13B-207ENST00000518569 PHF8Q9UPP1 1060 aa9.23□□□□□ -0.93
VPS13B-207ENST00000518569 PDCD7Q8N8D1 485 aaKnown RBP9.22□□□□□ -0.93
VPS13B-207ENST00000518569 ILDR1Q86SU0 546 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms