RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 CCDC61Q9Y6R9 512 aa11.43□□□□□ -0.58
PABPC1-206ENST00000518293 RASEFQ8IZ41 740 aa11.39□□□□□ -0.59
PABPC1-206ENST00000518293 KIF12Q96FN5 646 aa11.35□□□□□ -0.59
PABPC1-206ENST00000518293 ASTLQ6HA08 431 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-206ENST00000518293 FBXO3Q9UK99 471 aa11.34□□□□□ -0.59
PABPC1-206ENST00000518293 PELP1Q8IZL8 1130 aaKnown RBP11.32□□□□□ -0.6
PABPC1-206ENST00000518293 ATMINO43313 823 aaPredicted RBP11.31□□□□□ -0.6
PABPC1-206ENST00000518293 MAP3K13O43283 966 aa11.3□□□□□ -0.6
PABPC1-206ENST00000518293 NUBP1P53384 320 aa11.29□□□□□ -0.6
PABPC1-206ENST00000518293 SLC39A7Q92504 469 aa11.28□□□□□ -0.6
PABPC1-206ENST00000518293 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
PABPC1-206ENST00000518293 METRNQ9UJH8 293 aa11.27□□□□□ -0.61
PABPC1-206ENST00000518293 C7P10643 843 aa11.26□□□□□ -0.61
PABPC1-206ENST00000518293 ATN1P54259 1190 aaPredicted RBP11.24□□□□□ -0.61
PABPC1-206ENST00000518293 POTEB2H3BUK9 544 aa11.23□□□□□ -0.61
PABPC1-206ENST00000518293 TIE1P35590 1138 aa11.22□□□□□ -0.61
PABPC1-206ENST00000518293 SGIP1Q9BQI5 828 aa11.22□□□□□ -0.61
PABPC1-206ENST00000518293 BMP2KQ9NSY1 1161 aaPredicted RBP11.22□□□□□ -0.61
PABPC1-206ENST00000518293 TRPC6Q9Y210 931 aa11.22□□□□□ -0.61
PABPC1-206ENST00000518293 PCDHB13Q9Y5F0 798 aa11.22□□□□□ -0.61
PABPC1-206ENST00000518293 OTUD5Q96G74 571 aa11.2□□□□□ -0.62
PABPC1-206ENST00000518293 VASPP50552 380 aaPredicted RBP11.17□□□□□ -0.62
PABPC1-206ENST00000518293 DCAF8Q5TAQ9 597 aa11.17□□□□□ -0.62
PABPC1-206ENST00000518293 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
PABPC1-206ENST00000518293 TTLL13PA6NNM8 815 aa11.14□□□□□ -0.63
PABPC1-206ENST00000518293 IFNL1Q8IU54 200 aa11.13□□□□□ -0.63
PABPC1-206ENST00000518293 MAMSTRQ6ZN01 415 aa11.11□□□□□ -0.63
PABPC1-206ENST00000518293 SEC24BO95487 1268 aa11.09□□□□□ -0.63
PABPC1-206ENST00000518293 PYGBP11216 843 aa11.09□□□□□ -0.63
PABPC1-206ENST00000518293 TRIM35Q9UPQ4 493 aa11.09□□□□□ -0.63
PABPC1-206ENST00000518293 POTEJP0CG39 1038 aa11.07□□□□□ -0.64
PABPC1-206ENST00000518293 SCUBE2Q9NQ36 999 aa11.07□□□□□ -0.64
PABPC1-206ENST00000518293 POTEFA5A3E0 1075 aa11.06□□□□□ -0.64
PABPC1-206ENST00000518293 TMEM106CQ9BVX2 250 aa11.06□□□□□ -0.64
PABPC1-206ENST00000518293 GSE1Q14687 1217 aa11.05□□□□□ -0.64
PABPC1-206ENST00000518293 IER5LQ5T953 404 aa11.05□□□□□ -0.64
PABPC1-206ENST00000518293 COLQQ9Y215 455 aaPredicted RBP11.02□□□□□ -0.65
PABPC1-206ENST00000518293 PLSCR2Q9NRY7 297 aa11.01□□□□□ -0.65
PABPC1-206ENST00000518293 PCDHB8Q9UN66 801 aa10.99□□□□□ -0.65
PABPC1-206ENST00000518293 PLCG2P16885 1265 aa10.95□□□□□ -0.66
PABPC1-206ENST00000518293 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
PABPC1-206ENST00000518293 IFNLR1Q8IU57 520 aaPredicted RBP10.95□□□□□ -0.66
PABPC1-206ENST00000518293 SPOCK2Q92563 424 aa10.95□□□□□ -0.66
PABPC1-206ENST00000518293 CHRM1P11229 460 aaPredicted RBP10.92□□□□□ -0.66
PABPC1-206ENST00000518293 POTEMA6NI47 508 aa10.91□□□□□ -0.66
PABPC1-206ENST00000518293 CIZ1Q9ULV3 898 aaPredicted RBP10.91□□□□□ -0.66
PABPC1-206ENST00000518293 IRX5P78411 483 aaPredicted RBP10.89□□□□□ -0.67
PABPC1-206ENST00000518293 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
PABPC1-206ENST00000518293 POTEGQ6S5H5 508 aa10.88□□□□□ -0.67
PABPC1-206ENST00000518293 OCEL1Q9H607 264 aa10.88□□□□□ -0.67
PABPC1-206ENST00000518293 FAM163AQ96GL9 167 aaPredicted RBP10.87□□□□□ -0.67
PABPC1-206ENST00000518293 PSEN1P49768 467 aa10.84□□□□□ -0.67
PABPC1-206ENST00000518293 MKRN3Q13064 507 aaKnown RBP10.83□□□□□ -0.68
PABPC1-206ENST00000518293 SLAIN1Q8ND83 568 aa10.82□□□□□ -0.68
PABPC1-206ENST00000518293 PDAP1Q13442 181 aaKnown RBP10.8□□□□□ -0.68
PABPC1-206ENST00000518293 LCE2DQ5TA82 110 aaPredicted RBP10.78□□□□□ -0.68
PABPC1-206ENST00000518293 TRIM41Q8WV44 630 aa10.76□□□□□ -0.69
PABPC1-206ENST00000518293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.75□□□□□ -0.69
PABPC1-206ENST00000518293 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.75□□□□□ -0.69
PABPC1-206ENST00000518293 PCDH10Q9P2E7 1040 aa10.75□□□□□ -0.69
PABPC1-206ENST00000518293 PDCD7Q8N8D1 485 aaKnown RBP10.74□□□□□ -0.69
PABPC1-206ENST00000518293 L3MBTL3Q96JM7 780 aaPredicted RBP10.72□□□□□ -0.69
PABPC1-206ENST00000518293 CABP2Q9NPB3 220 aa10.72□□□□□ -0.69
PABPC1-206ENST00000518293 C3orf67Q6ZVT6 689 aa10.7□□□□□ -0.7
PABPC1-206ENST00000518293 SNPHO15079 494 aa10.67□□□□□ -0.7
PABPC1-206ENST00000518293 ST18O60284 1047 aa10.66□□□□□ -0.7
PABPC1-206ENST00000518293 ILDR1Q86SU0 546 aaPredicted RBP10.64□□□□□ -0.71
PABPC1-206ENST00000518293 G3V3G9 751 aa10.63□□□□□ -0.71
PABPC1-206ENST00000518293 RTN4Q9NQC3 1192 aaKnown RBP10.61□□□□□ -0.71
PABPC1-206ENST00000518293 RIOK3O14730 519 aaKnown RBP10.6□□□□□ -0.71
PABPC1-206ENST00000518293 DPY19L2Q6NUT2 758 aa10.6□□□□□ -0.71
PABPC1-206ENST00000518293 AMER1Q5JTC6 1135 aaPredicted RBP10.59□□□□□ -0.71
PABPC1-206ENST00000518293 PKD2Q13563 968 aa10.58□□□□□ -0.72
PABPC1-206ENST00000518293 TMEM121BQ9BXQ6 578 aaPredicted RBP10.58□□□□□ -0.72
PABPC1-206ENST00000518293 BOLA1Q9Y3E2 137 aa10.58□□□□□ -0.72
PABPC1-206ENST00000518293 CDAN1Q8IWY9 1227 aa10.57□□□□□ -0.72
PABPC1-206ENST00000518293 EFCAB3Q8N7B9 438 aa10.57□□□□□ -0.72
PABPC1-206ENST00000518293 VGFO15240 615 aaPredicted RBP10.55□□□□□ -0.72
PABPC1-206ENST00000518293 RNF25Q96BH1 459 aaPredicted RBP10.55□□□□□ -0.72
PABPC1-206ENST00000518293 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-206ENST00000518293 ZFP91Q96JP5 570 aaPredicted RBP10.53□□□□□ -0.72
PABPC1-206ENST00000518293 MARVELD3Q96A59 401 aa10.5□□□□□ -0.73
PABPC1-206ENST00000518293 TAOK2Q9UL54 1235 aa10.5□□□□□ -0.73
PABPC1-206ENST00000518293 SOX12O15370 315 aa10.49□□□□□ -0.73
PABPC1-206ENST00000518293 ECM2O94769 699 aaPredicted RBP10.46□□□□□ -0.73
PABPC1-206ENST00000518293 EMP3P54852 163 aa10.46□□□□□ -0.73
PABPC1-206ENST00000518293 PHF8Q9UPP1 1060 aa10.43□□□□□ -0.74
PABPC1-206ENST00000518293 MICALL2Q8IY33 904 aa10.42□□□□□ -0.74
PABPC1-206ENST00000518293 BCL11BQ9C0K0 894 aaPredicted RBP10.42□□□□□ -0.74
PABPC1-206ENST00000518293 STK24Q9Y6E0 443 aa10.41□□□□□ -0.74
PABPC1-206ENST00000518293 ZNF710Q8N1W2 664 aa10.4□□□□□ -0.74
PABPC1-206ENST00000518293 MS4A4AQ96JQ5 239 aa10.4□□□□□ -0.74
PABPC1-206ENST00000518293 RGL2O15211 777 aa10.39□□□□□ -0.75
PABPC1-206ENST00000518293 DOK7Q18PE1 504 aa10.39□□□□□ -0.75
PABPC1-206ENST00000518293 STK25O00506 426 aa10.38□□□□□ -0.75
PABPC1-206ENST00000518293 HOXB3P14651 431 aaPredicted RBP10.38□□□□□ -0.75
PABPC1-206ENST00000518293 NLRP6P59044 892 aa10.38□□□□□ -0.75
PABPC1-206ENST00000518293 FAM205CA6NFA0 338 aa10.37□□□□□ -0.75
PABPC1-206ENST00000518293 RIMBP2O15034 1052 aa10.35□□□□□ -0.75
PABPC1-206ENST00000518293 HS3ST6Q96QI5 342 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms