RNA–Protein interactions for RNA: ENST00000518263.5

CTNNA1-207, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-207ENST00000518263 AKT1S1Q96B36 256 aa9.27□□□□□ -0.93
CTNNA1-207ENST00000518263 CREBZFQ9NS37 354 aa9.26□□□□□ -0.93
CTNNA1-207ENST00000518263 DNAJC5Q9H3Z4 198 aa9.25□□□□□ -0.93
CTNNA1-207ENST00000518263 MNX1P50219 401 aaPredicted RBP9.24□□□□□ -0.93
CTNNA1-207ENST00000518263 DCAF8Q5TAQ9 597 aa9.24□□□□□ -0.93
CTNNA1-207ENST00000518263 RBM42Q9BTD8 480 aaKnown RBP9.24□□□□□ -0.93
CTNNA1-207ENST00000518263 CLEC11AQ9Y240 323 aa9.22□□□□□ -0.93
CTNNA1-207ENST00000518263 RIOK3O14730 519 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-207ENST00000518263 PRR29P0C7W0 189 aa9.21□□□□□ -0.94
CTNNA1-207ENST00000518263 NKX1-1Q15270 411 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-207ENST00000518263 REM2Q8IYK8 340 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-207ENST00000518263 RASEFQ8IZ41 740 aa9.17□□□□□ -0.94
CTNNA1-207ENST00000518263 FAM212AQ96EL1 285 aa9.17□□□□□ -0.94
CTNNA1-207ENST00000518263 CHRM1P11229 460 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-207ENST00000518263 TPRNQ4KMQ1 711 aa9.15□□□□□ -0.94
CTNNA1-207ENST00000518263 GTPBP6O43824 516 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-207ENST00000518263 VGFO15240 615 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-207ENST00000518263 STK25O00506 426 aa9.11□□□□□ -0.95
CTNNA1-207ENST00000518263 SGIP1Q9BQI5 828 aa9.1□□□□□ -0.95
CTNNA1-207ENST00000518263 PITPNM1O00562 1244 aa9.09□□□□□ -0.95
CTNNA1-207ENST00000518263 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-207ENST00000518263 PYGBP11216 843 aa9.07□□□□□ -0.96
CTNNA1-207ENST00000518263 ZFP91Q96JP5 570 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-207ENST00000518263 BCL11BQ9C0K0 894 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-207ENST00000518263 STK24Q9Y6E0 443 aa9.04□□□□□ -0.96
CTNNA1-207ENST00000518263 NBR1Q14596 966 aa9.03□□□□□ -0.96
CTNNA1-207ENST00000518263 CHADLQ6NUI6 762 aa8.98□□□□□ -0.97
CTNNA1-207ENST00000518263 RYDENQ9NUL5 291 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-207ENST00000518263 TSPYL2Q9H2G4 693 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-207ENST00000518263 FARP1Q9Y4F1 1045 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-207ENST00000518263 ZNF467Q7Z7K2 595 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-207ENST00000518263 PDAP1Q13442 181 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-207ENST00000518263 PCDHB8Q9UN66 801 aa8.9□□□□□ -0.98
CTNNA1-207ENST00000518263 PCDHB13Q9Y5F0 798 aa8.9□□□□□ -0.98
CTNNA1-207ENST00000518263 CADPS2Q86UW7 1296 aa8.88□□□□□ -0.99
CTNNA1-207ENST00000518263 CCDC61Q9Y6R9 512 aa8.88□□□□□ -0.99
CTNNA1-207ENST00000518263 PRKAR2AP13861 404 aaKnown RBP8.85□□□□□ -0.99
CTNNA1-207ENST00000518263 PSEN1P49768 467 aa8.85□□□□□ -0.99
CTNNA1-207ENST00000518263 ZNF579Q8NAF0 562 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-207ENST00000518263 MFRPQ9BY79 579 aa8.84□□□□□ -0.99
CTNNA1-207ENST00000518263 FXR2P51116 673 aaKnown RBP eCLIP8.83□□□□□ -1
CTNNA1-207ENST00000518263 P3H3Q8IVL6 736 aa8.81□□□□□ -1
CTNNA1-207ENST00000518263 KCNV2Q8TDN2 545 aa8.8□□□□□ -1
CTNNA1-207ENST00000518263 IFNL1Q8IU54 200 aa8.79□□□□□ -1
CTNNA1-207ENST00000518263 WDR70Q9NW82 654 aa8.78□□□□□ -1
CTNNA1-207ENST00000518263 MAP3K13O43283 966 aa8.77□□□□□ -1.01
CTNNA1-207ENST00000518263 PPP1R37O75864 691 aa8.77□□□□□ -1.01
CTNNA1-207ENST00000518263 FBXO22Q8NEZ5 403 aa8.76□□□□□ -1.01
CTNNA1-207ENST00000518263 KIF12Q96FN5 646 aa8.76□□□□□ -1.01
CTNNA1-207ENST00000518263 EFCAB3Q8N7B9 438 aa8.75□□□□□ -1.01
CTNNA1-207ENST00000518263 PAK3O75914 559 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-207ENST00000518263 CABP2Q9NPB3 220 aa8.73□□□□□ -1.01
CTNNA1-207ENST00000518263 SOX12O15370 315 aa8.72□□□□□ -1.01
CTNNA1-207ENST00000518263 NLRP6P59044 892 aa8.72□□□□□ -1.01
CTNNA1-207ENST00000518263 PIP4P2Q8N4L2 257 aa8.72□□□□□ -1.01
CTNNA1-207ENST00000518263 PHF8Q9UPP1 1060 aa8.72□□□□□ -1.01
CTNNA1-207ENST00000518263 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.7□□□□□ -1.02
CTNNA1-207ENST00000518263 LMOD2Q6P5Q4 547 aa8.69□□□□□ -1.02
CTNNA1-207ENST00000518263 CHRDL2Q6WN34 429 aa8.69□□□□□ -1.02
CTNNA1-207ENST00000518263 ARHGEF1Q92888 912 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-207ENST00000518263 ZRANB1Q9UGI0 708 aa8.66□□□□□ -1.02
CTNNA1-207ENST00000518263 E2F4Q16254 413 aa8.65□□□□□ -1.02
CTNNA1-207ENST00000518263 MS4A4AQ96JQ5 239 aa8.65□□□□□ -1.02
CTNNA1-207ENST00000518263 PHF12Q96QT6 1004 aa8.65□□□□□ -1.02
CTNNA1-207ENST00000518263 NCKAP5LQ9HCH0 1330 aa8.64□□□□□ -1.03
CTNNA1-207ENST00000518263 CD44P16070 742 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-207ENST00000518263 TESPA1A2RU30 521 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-207ENST00000518263 SEMA3EO15041 775 aa8.59□□□□□ -1.03
CTNNA1-207ENST00000518263 MFSD10Q14728 455 aa8.59□□□□□ -1.03
CTNNA1-207ENST00000518263 TRPC6Q9Y210 931 aa8.59□□□□□ -1.03
CTNNA1-207ENST00000518263 TMEM132AQ24JP5 1023 aa8.58□□□□□ -1.04
CTNNA1-207ENST00000518263 LARP6Q9BRS8 491 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-207ENST00000518263 TMEM106CQ9BVX2 250 aa8.58□□□□□ -1.04
CTNNA1-207ENST00000518263 CRISPLD2Q9H0B8 497 aa8.58□□□□□ -1.04
CTNNA1-207ENST00000518263 GTF3C3Q9Y5Q9 886 aa8.58□□□□□ -1.04
CTNNA1-207ENST00000518263 TULP1O00294 542 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-207ENST00000518263 PDE4AP27815 886 aa8.57□□□□□ -1.04
CTNNA1-207ENST00000518263 ZC3H15Q8WU90 426 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-207ENST00000518263 TIMELESSQ9UNS1 1208 aa8.56□□□□□ -1.04
CTNNA1-207ENST00000518263 MS4A3Q96HJ5 214 aa8.55□□□□□ -1.04
CTNNA1-207ENST00000518263 ARIH1Q9Y4X5 557 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-207ENST00000518263 GOLGA2Q08379 1002 aa8.53□□□□□ -1.04
CTNNA1-207ENST00000518263 DDX27Q96GQ7 796 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-207ENST00000518263 CAMK2BQ13554 666 aa8.52□□□□□ -1.05
CTNNA1-207ENST00000518263 C19orf67A6NJJ6 358 aa8.51□□□□□ -1.05
CTNNA1-207ENST00000518263 BRPF1P55201 1214 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-207ENST00000518263 MKRN3Q13064 507 aaKnown RBP8.51□□□□□ -1.05
CTNNA1-207ENST00000518263 ILDR1Q86SU0 546 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-207ENST00000518263 SLC24A3Q9HC58 644 aa8.49□□□□□ -1.05
CTNNA1-207ENST00000518263 TTLL13PA6NNM8 815 aa8.48□□□□□ -1.05
CTNNA1-207ENST00000518263 TIE1P35590 1138 aa8.48□□□□□ -1.05
CTNNA1-207ENST00000518263 ZMYND10O75800 440 aa8.46□□□□□ -1.06
CTNNA1-207ENST00000518263 SMYD5Q6GMV2 418 aa8.46□□□□□ -1.06
CTNNA1-207ENST00000518263 BMP2KQ9NSY1 1161 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-207ENST00000518263 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.45□□□□□ -1.06
CTNNA1-207ENST00000518263 PPP1R15BQ5SWA1 713 aa8.44□□□□□ -1.06
CTNNA1-207ENST00000518263 GPHNQ9NQX3 736 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-207ENST00000518263 MLLT3P42568 568 aaPredicted RBP8.42□□□□□ -1.06
CTNNA1-207ENST00000518263 NEUROD2Q15784 382 aa8.42□□□□□ -1.06
CTNNA1-207ENST00000518263 DPY19L2Q6NUT2 758 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms