RNA–Protein interactions for RNA: ENST00000518151.1

CSMD1-203, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-203ENST00000518151 GALR2O43603 387 aaPredicted RBP14.48□□□□□ -0.09
CSMD1-203ENST00000518151 NUBP1P53384 320 aa14.47□□□□□ -0.09
CSMD1-203ENST00000518151 FAM212AQ96EL1 285 aa14.46□□□□□ -0.09
CSMD1-203ENST00000518151 KLHL34Q8N239 644 aa14.45□□□□□ -0.1
CSMD1-203ENST00000518151 POTEIP0CG38 1075 aa14.39□□□□□ -0.11
CSMD1-203ENST00000518151 KIF12Q96FN5 646 aa14.39□□□□□ -0.11
CSMD1-203ENST00000518151 MS4A3Q96HJ5 214 aa14.39□□□□□ -0.11
CSMD1-203ENST00000518151 DCAF8Q5TAQ9 597 aa14.33□□□□□ -0.12
CSMD1-203ENST00000518151 MAP3K13O43283 966 aa14.32□□□□□ -0.12
CSMD1-203ENST00000518151 SGIP1Q9BQI5 828 aa14.32□□□□□ -0.12
CSMD1-203ENST00000518151 GSE1Q14687 1217 aa14.28□□□□□ -0.12
CSMD1-203ENST00000518151 IFNLR1Q8IU57 520 aaPredicted RBP14.27□□□□□ -0.13
CSMD1-203ENST00000518151 ASTLQ6HA08 431 aaPredicted RBP14.26□□□□□ -0.13
CSMD1-203ENST00000518151 SPOCK2Q92563 424 aa14.26□□□□□ -0.13
CSMD1-203ENST00000518151 PCDHB13Q9Y5F0 798 aa14.26□□□□□ -0.13
CSMD1-203ENST00000518151 LHX8Q68G74 356 aa14.23□□□□□ -0.13
CSMD1-203ENST00000518151 ATMINO43313 823 aaPredicted RBP14.21□□□□□ -0.13
CSMD1-203ENST00000518151 TIE1P35590 1138 aa14.2□□□□□ -0.14
CSMD1-203ENST00000518151 PYGBP11216 843 aa14.17□□□□□ -0.14
CSMD1-203ENST00000518151 SLC39A7Q92504 469 aa14.16□□□□□ -0.14
CSMD1-203ENST00000518151 IFNL1Q8IU54 200 aa14.15□□□□□ -0.14
CSMD1-203ENST00000518151 BMP2KQ9NSY1 1161 aaPredicted RBP14.15□□□□□ -0.14
CSMD1-203ENST00000518151 C7P10643 843 aa14.14□□□□□ -0.15
CSMD1-203ENST00000518151 PELP1Q8IZL8 1130 aaKnown RBP14.13□□□□□ -0.15
CSMD1-203ENST00000518151 TRPC6Q9Y210 931 aa14.13□□□□□ -0.15
CSMD1-203ENST00000518151 ATN1P54259 1190 aaPredicted RBP14.12□□□□□ -0.15
CSMD1-203ENST00000518151 CHRM1P11229 460 aaPredicted RBP14.1□□□□□ -0.15
CSMD1-203ENST00000518151 METRNQ9UJH8 293 aa14.1□□□□□ -0.15
CSMD1-203ENST00000518151 CIZ1Q9ULV3 898 aaPredicted RBP14.1□□□□□ -0.15
CSMD1-203ENST00000518151 TTLL13PA6NNM8 815 aa14.09□□□□□ -0.15
CSMD1-203ENST00000518151 ZNF467Q7Z7K2 595 aaPredicted RBP14.07□□□□□ -0.16
CSMD1-203ENST00000518151 TMEM106CQ9BVX2 250 aa14.04□□□□□ -0.16
CSMD1-203ENST00000518151 TRIM41Q8WV44 630 aa14.02□□□□□ -0.17
CSMD1-203ENST00000518151 PCDHB8Q9UN66 801 aa14.01□□□□□ -0.17
CSMD1-203ENST00000518151 TRIM35Q9UPQ4 493 aa14.01□□□□□ -0.17
CSMD1-203ENST00000518151 IER5LQ5T953 404 aa13.99□□□□□ -0.17
CSMD1-203ENST00000518151 SEC24BO95487 1268 aa13.95□□□□□ -0.18
CSMD1-203ENST00000518151 POTEB2H3BUK9 544 aa13.92□□□□□ -0.18
CSMD1-203ENST00000518151 MAMSTRQ6ZN01 415 aa13.91□□□□□ -0.18
CSMD1-203ENST00000518151 PDAP1Q13442 181 aaKnown RBP13.89□□□□□ -0.19
CSMD1-203ENST00000518151 PSEN1P49768 467 aa13.88□□□□□ -0.19
CSMD1-203ENST00000518151 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
CSMD1-203ENST00000518151 OTUD5Q96G74 571 aa13.85□□□□□ -0.19
CSMD1-203ENST00000518151 POTEFA5A3E0 1075 aa13.84□□□□□ -0.19
CSMD1-203ENST00000518151 PLCG2P16885 1265 aa13.84□□□□□ -0.19
CSMD1-203ENST00000518151 COLQQ9Y215 455 aaPredicted RBP13.84□□□□□ -0.19
CSMD1-203ENST00000518151 SCUBE2Q9NQ36 999 aa13.82□□□□□ -0.2
CSMD1-203ENST00000518151 MKRN3Q13064 507 aaKnown RBP13.8□□□□□ -0.2
CSMD1-203ENST00000518151 IRX5P78411 483 aaPredicted RBP13.79□□□□□ -0.2
CSMD1-203ENST00000518151 OCEL1Q9H607 264 aa13.78□□□□□ -0.2
CSMD1-203ENST00000518151 POTEJP0CG39 1038 aa13.77□□□□□ -0.21
CSMD1-203ENST00000518151 RIOK3O14730 519 aaKnown RBP13.75□□□□□ -0.21
CSMD1-203ENST00000518151 TAOK2Q9UL54 1235 aa13.71□□□□□ -0.21
CSMD1-203ENST00000518151 CABP2Q9NPB3 220 aa13.7□□□□□ -0.22
CSMD1-203ENST00000518151 VGFO15240 615 aaPredicted RBP13.68□□□□□ -0.22
CSMD1-203ENST00000518151 RNF25Q96BH1 459 aaPredicted RBP13.67□□□□□ -0.22
CSMD1-203ENST00000518151 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.22
CSMD1-203ENST00000518151 ECM2O94769 699 aaPredicted RBP13.66□□□□□ -0.22
CSMD1-203ENST00000518151 PDCD7Q8N8D1 485 aaKnown RBP13.63□□□□□ -0.23
CSMD1-203ENST00000518151 L3MBTL3Q96JM7 780 aaPredicted RBP13.62□□□□□ -0.23
CSMD1-203ENST00000518151 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.6□□□□□ -0.23
CSMD1-203ENST00000518151 ZFP91Q96JP5 570 aaPredicted RBP13.6□□□□□ -0.23
CSMD1-203ENST00000518151 PKD2Q13563 968 aa13.59□□□□□ -0.23
CSMD1-203ENST00000518151 ILDR1Q86SU0 546 aaPredicted RBP13.59□□□□□ -0.23
CSMD1-203ENST00000518151 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.56□□□□□ -0.24
CSMD1-203ENST00000518151 EFCAB3Q8N7B9 438 aa13.55□□□□□ -0.24
CSMD1-203ENST00000518151 SLAIN1Q8ND83 568 aa13.55□□□□□ -0.24
CSMD1-203ENST00000518151 G3V3G9 751 aa13.53□□□□□ -0.24
CSMD1-203ENST00000518151 C3orf67Q6ZVT6 689 aa13.53□□□□□ -0.24
CSMD1-203ENST00000518151 SOX12O15370 315 aa13.52□□□□□ -0.25
CSMD1-203ENST00000518151 BCL11BQ9C0K0 894 aaPredicted RBP13.49□□□□□ -0.25
CSMD1-203ENST00000518151 RGL2O15211 777 aa13.48□□□□□ -0.25
CSMD1-203ENST00000518151 STK25O00506 426 aa13.47□□□□□ -0.25
CSMD1-203ENST00000518151 STK24Q9Y6E0 443 aa13.47□□□□□ -0.25
CSMD1-203ENST00000518151 BOLA1Q9Y3E2 137 aa13.46□□□□□ -0.25
CSMD1-203ENST00000518151 DPY19L2Q6NUT2 758 aa13.45□□□□□ -0.26
CSMD1-203ENST00000518151 FAM163AQ96GL9 167 aaPredicted RBP13.44□□□□□ -0.26
CSMD1-203ENST00000518151 SNPHO15079 494 aa13.41□□□□□ -0.26
CSMD1-203ENST00000518151 NLRP6P59044 892 aa13.4□□□□□ -0.26
CSMD1-203ENST00000518151 PHF8Q9UPP1 1060 aa13.39□□□□□ -0.27
CSMD1-203ENST00000518151 POTEMA6NI47 508 aa13.37□□□□□ -0.27
CSMD1-203ENST00000518151 TMEM121BQ9BXQ6 578 aaPredicted RBP13.36□□□□□ -0.27
CSMD1-203ENST00000518151 POTEGQ6S5H5 508 aa13.35□□□□□ -0.27
CSMD1-203ENST00000518151 MS4A4AQ96JQ5 239 aa13.33□□□□□ -0.28
CSMD1-203ENST00000518151 LCE2DQ5TA82 110 aaPredicted RBP13.31□□□□□ -0.28
CSMD1-203ENST00000518151 MICALL2Q8IY33 904 aa13.3□□□□□ -0.28
CSMD1-203ENST00000518151 FBXO22Q8NEZ5 403 aa13.3□□□□□ -0.28
CSMD1-203ENST00000518151 MFRPQ9BY79 579 aa13.29□□□□□ -0.28
CSMD1-203ENST00000518151 ST18O60284 1047 aa13.27□□□□□ -0.29
CSMD1-203ENST00000518151 HS6ST3Q8IZP7 471 aa13.27□□□□□ -0.29
CSMD1-203ENST00000518151 PCDH10Q9P2E7 1040 aa13.25□□□□□ -0.29
CSMD1-203ENST00000518151 CHGAP10645 457 aaKnown RBP13.21□□□□□ -0.29
CSMD1-203ENST00000518151 DOK7Q18PE1 504 aa13.16□□□□□ -0.3
CSMD1-203ENST00000518151 RIMBP2O15034 1052 aa13.13□□□□□ -0.31
CSMD1-203ENST00000518151 ZNF710Q8N1W2 664 aa13.13□□□□□ -0.31
CSMD1-203ENST00000518151 DNAJC5Q9H3Z4 198 aa13.13□□□□□ -0.31
CSMD1-203ENST00000518151 RYDENQ9NUL5 291 aaKnown RBP13.13□□□□□ -0.31
CSMD1-203ENST00000518151 TMEM92Q6UXU6 159 aa13.12□□□□□ -0.31
CSMD1-203ENST00000518151 HOXB3P14651 431 aaPredicted RBP13.1□□□□□ -0.31
CSMD1-203ENST00000518151 DCAF8L2P0C7V8 631 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms