RNA–Protein interactions for RNA: ENST00000518110.1

SREK1-204, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 763 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-204ENST00000518110 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
SREK1-204ENST00000518110 PLSCR2Q9NRY7 297 aa13.72□□□□□ -0.21
SREK1-204ENST00000518110 GALR2O43603 387 aaPredicted RBP13.71□□□□□ -0.21
SREK1-204ENST00000518110 DCBLD2Q96PD2 775 aa13.71□□□□□ -0.21
SREK1-204ENST00000518110 PHF12Q96QT6 1004 aa13.71□□□□□ -0.21
SREK1-204ENST00000518110 AMER1Q5JTC6 1135 aaPredicted RBP13.69□□□□□ -0.22
SREK1-204ENST00000518110 LHX8Q68G74 356 aa13.69□□□□□ -0.22
SREK1-204ENST00000518110 FAM212AQ96EL1 285 aa13.67□□□□□ -0.22
SREK1-204ENST00000518110 RTN4Q9NQC3 1192 aaKnown RBP13.66□□□□□ -0.22
SREK1-204ENST00000518110 PKD2Q13563 968 aa13.64□□□□□ -0.23
SREK1-204ENST00000518110 GSE1Q14687 1217 aa13.64□□□□□ -0.23
SREK1-204ENST00000518110 CCDC61Q9Y6R9 512 aa13.62□□□□□ -0.23
SREK1-204ENST00000518110 TSPYL2Q9H2G4 693 aaPredicted RBP13.61□□□□□ -0.23
SREK1-204ENST00000518110 DCAF8Q5TAQ9 597 aa13.58□□□□□ -0.24
SREK1-204ENST00000518110 CIZ1Q9ULV3 898 aaPredicted RBP13.57□□□□□ -0.24
SREK1-204ENST00000518110 MS4A3Q96HJ5 214 aa13.55□□□□□ -0.24
SREK1-204ENST00000518110 TRIM41Q8WV44 630 aa13.54□□□□□ -0.24
SREK1-204ENST00000518110 CHRM1P11229 460 aaPredicted RBP13.51□□□□□ -0.25
SREK1-204ENST00000518110 KIF12Q96FN5 646 aa13.48□□□□□ -0.25
SREK1-204ENST00000518110 PYGBP11216 843 aa13.47□□□□□ -0.25
SREK1-204ENST00000518110 ECM2O94769 699 aaPredicted RBP13.46□□□□□ -0.25
SREK1-204ENST00000518110 ASTLQ6HA08 431 aaPredicted RBP13.45□□□□□ -0.26
SREK1-204ENST00000518110 PELP1Q8IZL8 1130 aaKnown RBP13.45□□□□□ -0.26
SREK1-204ENST00000518110 RNF25Q96BH1 459 aaPredicted RBP13.44□□□□□ -0.26
SREK1-204ENST00000518110 ATMINO43313 823 aaPredicted RBP13.42□□□□□ -0.26
SREK1-204ENST00000518110 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
SREK1-204ENST00000518110 MAP3K13O43283 966 aa13.4□□□□□ -0.26
SREK1-204ENST00000518110 RGL2O15211 777 aa13.39□□□□□ -0.27
SREK1-204ENST00000518110 POTEB2H3BUK9 544 aa13.35□□□□□ -0.27
SREK1-204ENST00000518110 IFNL1Q8IU54 200 aa13.33□□□□□ -0.28
SREK1-204ENST00000518110 SLC39A7Q92504 469 aa13.33□□□□□ -0.28
SREK1-204ENST00000518110 PCDHB13Q9Y5F0 798 aa13.33□□□□□ -0.28
SREK1-204ENST00000518110 C7P10643 843 aa13.32□□□□□ -0.28
SREK1-204ENST00000518110 ATN1P54259 1190 aaPredicted RBP13.32□□□□□ -0.28
SREK1-204ENST00000518110 METRNQ9UJH8 293 aa13.32□□□□□ -0.28
SREK1-204ENST00000518110 TRPC6Q9Y210 931 aa13.32□□□□□ -0.28
SREK1-204ENST00000518110 RIOK3O14730 519 aaKnown RBP13.31□□□□□ -0.28
SREK1-204ENST00000518110 ZNF467Q7Z7K2 595 aaPredicted RBP13.31□□□□□ -0.28
SREK1-204ENST00000518110 BMP2KQ9NSY1 1161 aaPredicted RBP13.31□□□□□ -0.28
SREK1-204ENST00000518110 TIE1P35590 1138 aa13.3□□□□□ -0.28
SREK1-204ENST00000518110 OTUD5Q96G74 571 aa13.28□□□□□ -0.28
SREK1-204ENST00000518110 PCDHB8Q9UN66 801 aa13.28□□□□□ -0.28
SREK1-204ENST00000518110 VGFO15240 615 aaPredicted RBP13.23□□□□□ -0.29
SREK1-204ENST00000518110 TTLL13PA6NNM8 815 aa13.21□□□□□ -0.29
SREK1-204ENST00000518110 PDAP1Q13442 181 aaKnown RBP13.19□□□□□ -0.3
SREK1-204ENST00000518110 POTEJP0CG39 1038 aa13.18□□□□□ -0.3
SREK1-204ENST00000518110 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.17□□□□□ -0.3
SREK1-204ENST00000518110 ZFP91Q96JP5 570 aaPredicted RBP13.17□□□□□ -0.3
SREK1-204ENST00000518110 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
SREK1-204ENST00000518110 PSEN1P49768 467 aa13.16□□□□□ -0.3
SREK1-204ENST00000518110 TAOK2Q9UL54 1235 aa13.16□□□□□ -0.3
SREK1-204ENST00000518110 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
SREK1-204ENST00000518110 TRIM35Q9UPQ4 493 aa13.12□□□□□ -0.31
SREK1-204ENST00000518110 MAMSTRQ6ZN01 415 aa13.11□□□□□ -0.31
SREK1-204ENST00000518110 DNAJC5Q9H3Z4 198 aa13.1□□□□□ -0.31
SREK1-204ENST00000518110 IER5LQ5T953 404 aa13.09□□□□□ -0.31
SREK1-204ENST00000518110 DCAF8L2P0C7V8 631 aa13.08□□□□□ -0.32
SREK1-204ENST00000518110 TMEM106CQ9BVX2 250 aa13.08□□□□□ -0.32
SREK1-204ENST00000518110 BCL11BQ9C0K0 894 aaPredicted RBP13.08□□□□□ -0.32
SREK1-204ENST00000518110 COLQQ9Y215 455 aaPredicted RBP13.08□□□□□ -0.32
SREK1-204ENST00000518110 STK25O00506 426 aa13.07□□□□□ -0.32
SREK1-204ENST00000518110 SEC24BO95487 1268 aa13.05□□□□□ -0.32
SREK1-204ENST00000518110 CHGAP10645 457 aaKnown RBP13.05□□□□□ -0.32
SREK1-204ENST00000518110 SCUBE2Q9NQ36 999 aa13.03□□□□□ -0.32
SREK1-204ENST00000518110 STK24Q9Y6E0 443 aa13.02□□□□□ -0.33
SREK1-204ENST00000518110 CABP2Q9NPB3 220 aa12.99□□□□□ -0.33
SREK1-204ENST00000518110 NKX1-1Q15270 411 aaPredicted RBP12.97□□□□□ -0.33
SREK1-204ENST00000518110 IRX5P78411 483 aaPredicted RBP12.94□□□□□ -0.34
SREK1-204ENST00000518110 EFCAB3Q8N7B9 438 aa12.94□□□□□ -0.34
SREK1-204ENST00000518110 ILDR1Q86SU0 546 aaPredicted RBP12.93□□□□□ -0.34
SREK1-204ENST00000518110 BBXQ8WY36 941 aaPredicted RBP12.93□□□□□ -0.34
SREK1-204ENST00000518110 PLCG2P16885 1265 aa12.91□□□□□ -0.34
SREK1-204ENST00000518110 MFRPQ9BY79 579 aa12.9□□□□□ -0.34
SREK1-204ENST00000518110 SOX12O15370 315 aa12.88□□□□□ -0.35
SREK1-204ENST00000518110 POTEMA6NI47 508 aa12.87□□□□□ -0.35
SREK1-204ENST00000518110 GOLGA2Q08379 1002 aa12.87□□□□□ -0.35
SREK1-204ENST00000518110 FBXO22Q8NEZ5 403 aa12.87□□□□□ -0.35
SREK1-204ENST00000518110 OCEL1Q9H607 264 aa12.87□□□□□ -0.35
SREK1-204ENST00000518110 MKRN3Q13064 507 aaKnown RBP12.86□□□□□ -0.35
SREK1-204ENST00000518110 POTEGQ6S5H5 508 aa12.85□□□□□ -0.35
SREK1-204ENST00000518110 LCE2DQ5TA82 110 aaPredicted RBP12.84□□□□□ -0.35
SREK1-204ENST00000518110 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
SREK1-204ENST00000518110 PDCD7Q8N8D1 485 aaKnown RBP12.83□□□□□ -0.36
SREK1-204ENST00000518110 MS4A4AQ96JQ5 239 aa12.83□□□□□ -0.36
SREK1-204ENST00000518110 GTPBP6O43824 516 aaPredicted RBP12.81□□□□□ -0.36
SREK1-204ENST00000518110 FAM163AQ96GL9 167 aaPredicted RBP12.81□□□□□ -0.36
SREK1-204ENST00000518110 NLRP6P59044 892 aa12.79□□□□□ -0.36
SREK1-204ENST00000518110 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.78□□□□□ -0.361e-7■■□□□ 11.9
SREK1-204ENST00000518110 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.78□□□□□ -0.36
SREK1-204ENST00000518110 SLAIN1Q8ND83 568 aa12.77□□□□□ -0.37
SREK1-204ENST00000518110 RYDENQ9NUL5 291 aaKnown RBP12.75□□□□□ -0.37
SREK1-204ENST00000518110 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
SREK1-204ENST00000518110 SPRYD3Q8NCJ5 442 aa12.71□□□□□ -0.37
SREK1-204ENST00000518110 PAXIP1Q6ZW49 1069 aaPredicted RBP12.7□□□□□ -0.38
SREK1-204ENST00000518110 PCDH10Q9P2E7 1040 aa12.7□□□□□ -0.38
SREK1-204ENST00000518110 PPP1R37O75864 691 aa12.69□□□□□ -0.38
SREK1-204ENST00000518110 DPY19L2Q6NUT2 758 aa12.69□□□□□ -0.38
SREK1-204ENST00000518110 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
SREK1-204ENST00000518110 L3MBTL3Q96JM7 780 aaPredicted RBP12.66□□□□□ -0.38
SREK1-204ENST00000518110 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms