RNA–Protein interactions for RNA: ENST00000517594.1

MSRA-204, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 4

Gene MSRA, Length 596 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-204ENST00000517594 PELP1Q8IZL8 1130 aaKnown RBP13.8□□□□□ -0.2
MSRA-204ENST00000517594 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
MSRA-204ENST00000517594 KIF12Q96FN5 646 aa13.76□□□□□ -0.21
MSRA-204ENST00000517594 POTEB2H3BUK9 544 aa13.73□□□□□ -0.21
MSRA-204ENST00000517594 ASTLQ6HA08 431 aaPredicted RBP13.72□□□□□ -0.21
MSRA-204ENST00000517594 ATMINO43313 823 aaPredicted RBP13.71□□□□□ -0.21
MSRA-204ENST00000517594 NUBP1P53384 320 aa13.7□□□□□ -0.22
MSRA-204ENST00000517594 TRPC6Q9Y210 931 aa13.7□□□□□ -0.22
MSRA-204ENST00000517594 MAP3K13O43283 966 aa13.69□□□□□ -0.22
MSRA-204ENST00000517594 ATN1P54259 1190 aaPredicted RBP13.63□□□□□ -0.23
MSRA-204ENST00000517594 ZBTB47Q9UFB7 747 aaPredicted RBP13.63□□□□□ -0.23
MSRA-204ENST00000517594 OTUD5Q96G74 571 aa13.62□□□□□ -0.23
MSRA-204ENST00000517594 METRNQ9UJH8 293 aa13.62□□□□□ -0.23
MSRA-204ENST00000517594 BMP2KQ9NSY1 1161 aaPredicted RBP13.61□□□□□ -0.23
MSRA-204ENST00000517594 SLC39A7Q92504 469 aa13.57□□□□□ -0.24
MSRA-204ENST00000517594 FBXO3Q9UK99 471 aa13.56□□□□□ -0.24
MSRA-204ENST00000517594 POTEJP0CG39 1038 aa13.55□□□□□ -0.24
MSRA-204ENST00000517594 C7P10643 843 aa13.55□□□□□ -0.24
MSRA-204ENST00000517594 TIE1P35590 1138 aa13.53□□□□□ -0.24
MSRA-204ENST00000517594 FAM212AQ96EL1 285 aa13.52□□□□□ -0.25
MSRA-204ENST00000517594 PCDHB13Q9Y5F0 798 aa13.52□□□□□ -0.25
MSRA-204ENST00000517594 POTEFA5A3E0 1075 aa13.51□□□□□ -0.25
MSRA-204ENST00000517594 TTLL13PA6NNM8 815 aa13.5□□□□□ -0.25
MSRA-204ENST00000517594 VASPP50552 380 aaPredicted RBP13.49□□□□□ -0.25
MSRA-204ENST00000517594 IFNL1Q8IU54 200 aa13.49□□□□□ -0.25
MSRA-204ENST00000517594 SGIP1Q9BQI5 828 aa13.49□□□□□ -0.25
MSRA-204ENST00000517594 DCAF8Q5TAQ9 597 aa13.43□□□□□ -0.26
MSRA-204ENST00000517594 PYGBP11216 843 aa13.4□□□□□ -0.26
MSRA-204ENST00000517594 TRIM35Q9UPQ4 493 aa13.4□□□□□ -0.26
MSRA-204ENST00000517594 COLQQ9Y215 455 aaPredicted RBP13.4□□□□□ -0.26
MSRA-204ENST00000517594 KLHL34Q8N239 644 aa13.37□□□□□ -0.27
MSRA-204ENST00000517594 TMEM106CQ9BVX2 250 aa13.35□□□□□ -0.27
MSRA-204ENST00000517594 PCDHB8Q9UN66 801 aa13.32□□□□□ -0.28
MSRA-204ENST00000517594 MAMSTRQ6ZN01 415 aa13.31□□□□□ -0.28
MSRA-204ENST00000517594 IER5LQ5T953 404 aa13.3□□□□□ -0.28
MSRA-204ENST00000517594 SEC24BO95487 1268 aa13.29□□□□□ -0.28
MSRA-204ENST00000517594 IFNLR1Q8IU57 520 aaPredicted RBP13.29□□□□□ -0.28
MSRA-204ENST00000517594 SCUBE2Q9NQ36 999 aa13.27□□□□□ -0.29
MSRA-204ENST00000517594 GSE1Q14687 1217 aa13.25□□□□□ -0.29
MSRA-204ENST00000517594 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
MSRA-204ENST00000517594 LCE2DQ5TA82 110 aaPredicted RBP13.21□□□□□ -0.29
MSRA-204ENST00000517594 POTEMA6NI47 508 aa13.18□□□□□ -0.3
MSRA-204ENST00000517594 CHRM1P11229 460 aaPredicted RBP13.18□□□□□ -0.3
MSRA-204ENST00000517594 SPOCK2Q92563 424 aa13.18□□□□□ -0.3
MSRA-204ENST00000517594 PLCG2P16885 1265 aa13.16□□□□□ -0.3
MSRA-204ENST00000517594 POTEGQ6S5H5 508 aa13.16□□□□□ -0.3
MSRA-204ENST00000517594 ZNF467Q7Z7K2 595 aaPredicted RBP13.14□□□□□ -0.31
MSRA-204ENST00000517594 FAM163AQ96GL9 167 aaPredicted RBP13.11□□□□□ -0.31
MSRA-204ENST00000517594 OCEL1Q9H607 264 aa13.1□□□□□ -0.31
MSRA-204ENST00000517594 CIZ1Q9ULV3 898 aaPredicted RBP13.1□□□□□ -0.31
MSRA-204ENST00000517594 PSEN1P49768 467 aa13.08□□□□□ -0.32
MSRA-204ENST00000517594 SLAIN1Q8ND83 568 aa13.05□□□□□ -0.32
MSRA-204ENST00000517594 PDCD7Q8N8D1 485 aaKnown RBP13.04□□□□□ -0.32
MSRA-204ENST00000517594 PLSCR2Q9NRY7 297 aa13.03□□□□□ -0.32
MSRA-204ENST00000517594 PDAP1Q13442 181 aaKnown RBP13□□□□□ -0.33
MSRA-204ENST00000517594 MKRN3Q13064 507 aaKnown RBP12.98□□□□□ -0.33
MSRA-204ENST00000517594 GOLGA2Q08379 1002 aa12.97□□□□□ -0.33
MSRA-204ENST00000517594 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.34
MSRA-204ENST00000517594 ILDR1Q86SU0 546 aaPredicted RBP12.93□□□□□ -0.34
MSRA-204ENST00000517594 CABP2Q9NPB3 220 aa12.93□□□□□ -0.34
MSRA-204ENST00000517594 ST18O60284 1047 aa12.91□□□□□ -0.34
MSRA-204ENST00000517594 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.91□□□□□ -0.34
MSRA-204ENST00000517594 DPY19L2Q6NUT2 758 aa12.89□□□□□ -0.35
MSRA-204ENST00000517594 PCDH10Q9P2E7 1040 aa12.88□□□□□ -0.35
MSRA-204ENST00000517594 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
MSRA-204ENST00000517594 RNF25Q96BH1 459 aaPredicted RBP12.86□□□□□ -0.35
MSRA-204ENST00000517594 L3MBTL3Q96JM7 780 aaPredicted RBP12.85□□□□□ -0.35
MSRA-204ENST00000517594 C3orf67Q6ZVT6 689 aa12.82□□□□□ -0.36
MSRA-204ENST00000517594 EFCAB3Q8N7B9 438 aa12.8□□□□□ -0.36
MSRA-204ENST00000517594 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.37
MSRA-204ENST00000517594 RIOK3O14730 519 aaKnown RBP12.76□□□□□ -0.37
MSRA-204ENST00000517594 BOLA1Q9Y3E2 137 aa12.75□□□□□ -0.37
MSRA-204ENST00000517594 SNPHO15079 494 aa12.74□□□□□ -0.37
MSRA-204ENST00000517594 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.73□□□□□ -0.37
MSRA-204ENST00000517594 ZFP91Q96JP5 570 aaPredicted RBP12.73□□□□□ -0.37
MSRA-204ENST00000517594 MARVELD3Q96A59 401 aa12.71□□□□□ -0.37
MSRA-204ENST00000517594 TMEM121BQ9BXQ6 578 aaPredicted RBP12.71□□□□□ -0.37
MSRA-204ENST00000517594 VGFO15240 615 aaPredicted RBP12.69□□□□□ -0.38
MSRA-204ENST00000517594 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
MSRA-204ENST00000517594 G3V3G9 751 aa12.65□□□□□ -0.38
MSRA-204ENST00000517594 PHF8Q9UPP1 1060 aa12.63□□□□□ -0.39
MSRA-204ENST00000517594 SOX12O15370 315 aa12.62□□□□□ -0.39
MSRA-204ENST00000517594 HOXB3P14651 431 aaPredicted RBP12.62□□□□□ -0.39
MSRA-204ENST00000517594 MICALL2Q8IY33 904 aa12.6□□□□□ -0.39
MSRA-204ENST00000517594 POTEB3A0JP26 581 aa12.59□□□□□ -0.39
MSRA-204ENST00000517594 POTEBQ6S5H4 581 aa12.59□□□□□ -0.39
MSRA-204ENST00000517594 TMEM92Q6UXU6 159 aa12.59□□□□□ -0.39
MSRA-204ENST00000517594 EMP3P54852 163 aa12.57□□□□□ -0.4
MSRA-204ENST00000517594 BCL11BQ9C0K0 894 aaPredicted RBP12.57□□□□□ -0.4
MSRA-204ENST00000517594 PKD2Q13563 968 aa12.56□□□□□ -0.4
MSRA-204ENST00000517594 ECM2O94769 699 aaPredicted RBP12.55□□□□□ -0.4
MSRA-204ENST00000517594 FBXO22Q8NEZ5 403 aa12.53□□□□□ -0.4
MSRA-204ENST00000517594 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
MSRA-204ENST00000517594 FAM205CA6NFA0 338 aa12.52□□□□□ -0.41
MSRA-204ENST00000517594 HS3ST6Q96QI5 342 aa12.52□□□□□ -0.41
MSRA-204ENST00000517594 RGL2O15211 777 aa12.51□□□□□ -0.41
MSRA-204ENST00000517594 MFRPQ9BY79 579 aa12.49□□□□□ -0.41
MSRA-204ENST00000517594 STK25O00506 426 aa12.48□□□□□ -0.41
MSRA-204ENST00000517594 NLRP6P59044 892 aa12.48□□□□□ -0.41
MSRA-204ENST00000517594 HOXB1P14653 301 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms