RNA–Protein interactions for RNA: ENST00000517393.1

POLB-202, Transcript of DNA polymerase beta, humanhuman

TSL 3

Gene POLB, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-202ENST00000517393 CCDC61Q9Y6R9 512 aa8.03□□□□□ -1.12
POLB-202ENST00000517393 RASEFQ8IZ41 740 aa7.98□□□□□ -1.13
POLB-202ENST00000517393 FAM212AQ96EL1 285 aa7.98□□□□□ -1.13
POLB-202ENST00000517393 MS4A3Q96HJ5 214 aa7.98□□□□□ -1.13
POLB-202ENST00000517393 KIF12Q96FN5 646 aa7.97□□□□□ -1.13
POLB-202ENST00000517393 SGIP1Q9BQI5 828 aa7.96□□□□□ -1.14
POLB-202ENST00000517393 NUBP1P53384 320 aa7.95□□□□□ -1.14
POLB-202ENST00000517393 ASTLQ6HA08 431 aaPredicted RBP7.95□□□□□ -1.14
POLB-202ENST00000517393 MAP3K13O43283 966 aa7.92□□□□□ -1.14
POLB-202ENST00000517393 ATMINO43313 823 aaPredicted RBP7.92□□□□□ -1.14
POLB-202ENST00000517393 C7P10643 843 aa7.92□□□□□ -1.14
POLB-202ENST00000517393 VASPP50552 380 aaPredicted RBP7.92□□□□□ -1.14
POLB-202ENST00000517393 SLC39A7Q92504 469 aa7.92□□□□□ -1.14
POLB-202ENST00000517393 TIE1P35590 1138 aa7.9□□□□□ -1.14
POLB-202ENST00000517393 KLHL34Q8N239 644 aa7.9□□□□□ -1.14
POLB-202ENST00000517393 PCDHB13Q9Y5F0 798 aa7.88□□□□□ -1.15
POLB-202ENST00000517393 GSE1Q14687 1217 aa7.87□□□□□ -1.15
POLB-202ENST00000517393 DCAF8Q5TAQ9 597 aa7.87□□□□□ -1.15
POLB-202ENST00000517393 METRNQ9UJH8 293 aa7.87□□□□□ -1.15
POLB-202ENST00000517393 ATN1P54259 1190 aaPredicted RBP7.85□□□□□ -1.15
POLB-202ENST00000517393 PELP1Q8IZL8 1130 aaKnown RBP7.85□□□□□ -1.15
POLB-202ENST00000517393 BMP2KQ9NSY1 1161 aaPredicted RBP7.85□□□□□ -1.15
POLB-202ENST00000517393 MAMSTRQ6ZN01 415 aa7.84□□□□□ -1.15
POLB-202ENST00000517393 IER5LQ5T953 404 aa7.82□□□□□ -1.16
POLB-202ENST00000517393 TTLL13PA6NNM8 815 aa7.81□□□□□ -1.16
POLB-202ENST00000517393 IFNL1Q8IU54 200 aa7.81□□□□□ -1.16
POLB-202ENST00000517393 SEC24BO95487 1268 aa7.78□□□□□ -1.16
POLB-202ENST00000517393 PYGBP11216 843 aa7.78□□□□□ -1.16
POLB-202ENST00000517393 SPOCK2Q92563 424 aa7.78□□□□□ -1.16
POLB-202ENST00000517393 TRIM35Q9UPQ4 493 aa7.78□□□□□ -1.16
POLB-202ENST00000517393 TRPC6Q9Y210 931 aa7.78□□□□□ -1.16
POLB-202ENST00000517393 POTEB2H3BUK9 544 aa7.77□□□□□ -1.17
POLB-202ENST00000517393 ZNF467Q7Z7K2 595 aaPredicted RBP7.77□□□□□ -1.17
POLB-202ENST00000517393 OTUD5Q96G74 571 aa7.77□□□□□ -1.17
POLB-202ENST00000517393 TMEM106CQ9BVX2 250 aa7.77□□□□□ -1.17
POLB-202ENST00000517393 SCUBE2Q9NQ36 999 aa7.77□□□□□ -1.17
POLB-202ENST00000517393 CHRM1P11229 460 aaPredicted RBP7.76□□□□□ -1.17
POLB-202ENST00000517393 IFNLR1Q8IU57 520 aaPredicted RBP7.74□□□□□ -1.17
POLB-202ENST00000517393 TRIM41Q8WV44 630 aa7.71□□□□□ -1.18
POLB-202ENST00000517393 PLCG2P16885 1265 aa7.7□□□□□ -1.18
POLB-202ENST00000517393 CIZ1Q9ULV3 898 aaPredicted RBP7.7□□□□□ -1.18
POLB-202ENST00000517393 GOLGA2Q08379 1002 aa7.69□□□□□ -1.18
POLB-202ENST00000517393 PCDHB8Q9UN66 801 aa7.69□□□□□ -1.18
POLB-202ENST00000517393 POTEFA5A3E0 1075 aa7.68□□□□□ -1.18
POLB-202ENST00000517393 COLQQ9Y215 455 aaPredicted RBP7.68□□□□□ -1.18
POLB-202ENST00000517393 POTEJP0CG39 1038 aa7.67□□□□□ -1.18
POLB-202ENST00000517393 OCEL1Q9H607 264 aa7.67□□□□□ -1.18
POLB-202ENST00000517393 IRX5P78411 483 aaPredicted RBP7.65□□□□□ -1.18
POLB-202ENST00000517393 PSEN1P49768 467 aa7.64□□□□□ -1.19
POLB-202ENST00000517393 MKRN3Q13064 507 aaKnown RBP7.64□□□□□ -1.19
POLB-202ENST00000517393 PDAP1Q13442 181 aaKnown RBP7.64□□□□□ -1.19
POLB-202ENST00000517393 L3MBTL3Q96JM7 780 aaPredicted RBP7.57□□□□□ -1.2
POLB-202ENST00000517393 PCDH10Q9P2E7 1040 aa7.57□□□□□ -1.2
POLB-202ENST00000517393 POTEMA6NI47 508 aa7.56□□□□□ -1.2
POLB-202ENST00000517393 SLAIN1Q8ND83 568 aa7.56□□□□□ -1.2
POLB-202ENST00000517393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.56□□□□□ -1.2
POLB-202ENST00000517393 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.55□□□□□ -1.2
POLB-202ENST00000517393 TAOK2Q9UL54 1235 aa7.55□□□□□ -1.2
POLB-202ENST00000517393 POTEGQ6S5H5 508 aa7.54□□□□□ -1.2
POLB-202ENST00000517393 FAM163AQ96GL9 167 aaPredicted RBP7.54□□□□□ -1.2
POLB-202ENST00000517393 SNPHO15079 494 aa7.53□□□□□ -1.2
POLB-202ENST00000517393 C3orf67Q6ZVT6 689 aa7.53□□□□□ -1.2
POLB-202ENST00000517393 CABP2Q9NPB3 220 aa7.53□□□□□ -1.2
POLB-202ENST00000517393 G3V3G9 751 aa7.52□□□□□ -1.21
POLB-202ENST00000517393 RIOK3O14730 519 aaKnown RBP7.52□□□□□ -1.21
POLB-202ENST00000517393 ILDR1Q86SU0 546 aaPredicted RBP7.52□□□□□ -1.21
POLB-202ENST00000517393 PDCD7Q8N8D1 485 aaKnown RBP7.52□□□□□ -1.21
POLB-202ENST00000517393 VGFO15240 615 aaPredicted RBP7.5□□□□□ -1.21
POLB-202ENST00000517393 TMEM121BQ9BXQ6 578 aaPredicted RBP7.47□□□□□ -1.21
POLB-202ENST00000517393 SOX12O15370 315 aa7.45□□□□□ -1.22
POLB-202ENST00000517393 LCE2DQ5TA82 110 aaPredicted RBP7.45□□□□□ -1.22
POLB-202ENST00000517393 PLSCR2Q9NRY7 297 aa7.44□□□□□ -1.22
POLB-202ENST00000517393 BOLA1Q9Y3E2 137 aa7.44□□□□□ -1.22
POLB-202ENST00000517393 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.43□□□□□ -1.22
POLB-202ENST00000517393 EFCAB3Q8N7B9 438 aa7.43□□□□□ -1.22
POLB-202ENST00000517393 RNF25Q96BH1 459 aaPredicted RBP7.43□□□□□ -1.22
POLB-202ENST00000517393 ZFP91Q96JP5 570 aaPredicted RBP7.43□□□□□ -1.22
POLB-202ENST00000517393 ST18O60284 1047 aa7.42□□□□□ -1.22
POLB-202ENST00000517393 ECM2O94769 699 aaPredicted RBP7.4□□□□□ -1.22
POLB-202ENST00000517393 DPY19L2Q6NUT2 758 aa7.4□□□□□ -1.22
POLB-202ENST00000517393 NLRP6P59044 892 aa7.37□□□□□ -1.23
POLB-202ENST00000517393 BCL11BQ9C0K0 894 aaPredicted RBP7.36□□□□□ -1.23
POLB-202ENST00000517393 STK25O00506 426 aa7.35□□□□□ -1.23
POLB-202ENST00000517393 STK24Q9Y6E0 443 aa7.35□□□□□ -1.23
POLB-202ENST00000517393 RIMBP2O15034 1052 aa7.34□□□□□ -1.23
POLB-202ENST00000517393 DOK7Q18PE1 504 aa7.34□□□□□ -1.23
POLB-202ENST00000517393 CDAN1Q8IWY9 1227 aa7.34□□□□□ -1.23
POLB-202ENST00000517393 PKD2Q13563 968 aa7.33□□□□□ -1.24
POLB-202ENST00000517393 MICALL2Q8IY33 904 aa7.33□□□□□ -1.24
POLB-202ENST00000517393 PHF8Q9UPP1 1060 aa7.32□□□□□ -1.24
POLB-202ENST00000517393 EMP3P54852 163 aa7.31□□□□□ -1.24
POLB-202ENST00000517393 ZNF710Q8N1W2 664 aa7.31□□□□□ -1.24
POLB-202ENST00000517393 MS4A4AQ96JQ5 239 aa7.3□□□□□ -1.24
POLB-202ENST00000517393 RGL2O15211 777 aa7.28□□□□□ -1.24
POLB-202ENST00000517393 FBXO22Q8NEZ5 403 aa7.28□□□□□ -1.24
POLB-202ENST00000517393 MARVELD3Q96A59 401 aa7.28□□□□□ -1.24
POLB-202ENST00000517393 ZSWIM6Q9HCJ5 1215 aa7.28□□□□□ -1.24
POLB-202ENST00000517393 HOXB3P14651 431 aaPredicted RBP7.26□□□□□ -1.25
POLB-202ENST00000517393 MFRPQ9BY79 579 aa7.26□□□□□ -1.25
POLB-202ENST00000517393 HOXB1P14653 301 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms