RNA–Protein interactions for RNA: ENST00000517315.1

NSMCE2-202, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3 BASIC

Gene NSMCE2, Length 996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-202ENST00000517315 PHF12Q96QT6 1004 aa12.19□□□□□ -0.46
NSMCE2-202ENST00000517315 CCDC61Q9Y6R9 512 aa12.17□□□□□ -0.46
NSMCE2-202ENST00000517315 FAM212AQ96EL1 285 aa12.16□□□□□ -0.46
NSMCE2-202ENST00000517315 SPOCK2Q92563 424 aa12.14□□□□□ -0.47
NSMCE2-202ENST00000517315 CLCN6P51797 869 aa12.12□□□□□ -0.47
NSMCE2-202ENST00000517315 DCAF8Q5TAQ9 597 aa12.11□□□□□ -0.47
NSMCE2-202ENST00000517315 GALR2O43603 387 aaPredicted RBP12.07□□□□□ -0.48
NSMCE2-202ENST00000517315 KIF12Q96FN5 646 aa12.06□□□□□ -0.48
NSMCE2-202ENST00000517315 GSE1Q14687 1217 aa12.04□□□□□ -0.48
NSMCE2-202ENST00000517315 MS4A3Q96HJ5 214 aa12.04□□□□□ -0.48
NSMCE2-202ENST00000517315 MAP3K13O43283 966 aa12.03□□□□□ -0.48
NSMCE2-202ENST00000517315 PYGBP11216 843 aa12□□□□□ -0.49
NSMCE2-202ENST00000517315 LHX8Q68G74 356 aa12□□□□□ -0.49
NSMCE2-202ENST00000517315 CIZ1Q9ULV3 898 aaPredicted RBP12□□□□□ -0.49
NSMCE2-202ENST00000517315 DCBLD2Q96PD2 775 aa11.96□□□□□ -0.49
NSMCE2-202ENST00000517315 PCDHB13Q9Y5F0 798 aa11.96□□□□□ -0.49
NSMCE2-202ENST00000517315 POTEIP0CG38 1075 aa11.95□□□□□ -0.5
NSMCE2-202ENST00000517315 SGIP1Q9BQI5 828 aa11.94□□□□□ -0.5
NSMCE2-202ENST00000517315 IFNL1Q8IU54 200 aa11.91□□□□□ -0.5
NSMCE2-202ENST00000517315 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
NSMCE2-202ENST00000517315 CHRM1P11229 460 aaPredicted RBP11.9□□□□□ -0.5
NSMCE2-202ENST00000517315 TRIM41Q8WV44 630 aa11.85□□□□□ -0.51
NSMCE2-202ENST00000517315 PCDHB8Q9UN66 801 aa11.85□□□□□ -0.51
NSMCE2-202ENST00000517315 ASTLQ6HA08 431 aaPredicted RBP11.84□□□□□ -0.51
NSMCE2-202ENST00000517315 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
NSMCE2-202ENST00000517315 ATMINO43313 823 aaPredicted RBP11.83□□□□□ -0.52
NSMCE2-202ENST00000517315 TIE1P35590 1138 aa11.83□□□□□ -0.52
NSMCE2-202ENST00000517315 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
NSMCE2-202ENST00000517315 CCDC180Q9P1Z9 1646 aa11.8□□□□□ -0.52
NSMCE2-202ENST00000517315 ATN1P54259 1190 aaPredicted RBP11.8□□□□□ -0.52
NSMCE2-202ENST00000517315 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
NSMCE2-202ENST00000517315 PLSCR2Q9NRY7 297 aa11.79□□□□□ -0.52
NSMCE2-202ENST00000517315 TTLL13PA6NNM8 815 aa11.78□□□□□ -0.52
NSMCE2-202ENST00000517315 PKD2Q13563 968 aa11.76□□□□□ -0.53
NSMCE2-202ENST00000517315 TMEM106CQ9BVX2 250 aa11.76□□□□□ -0.53
NSMCE2-202ENST00000517315 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
NSMCE2-202ENST00000517315 RNF25Q96BH1 459 aaPredicted RBP11.73□□□□□ -0.53
NSMCE2-202ENST00000517315 PSEN1P49768 467 aa11.71□□□□□ -0.53
NSMCE2-202ENST00000517315 TRIM35Q9UPQ4 493 aa11.71□□□□□ -0.53
NSMCE2-202ENST00000517315 PDAP1Q13442 181 aaKnown RBP11.7□□□□□ -0.54
NSMCE2-202ENST00000517315 SLC39A7Q92504 469 aa11.7□□□□□ -0.54
NSMCE2-202ENST00000517315 METRNQ9UJH8 293 aa11.69□□□□□ -0.54
NSMCE2-202ENST00000517315 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
NSMCE2-202ENST00000517315 C7P10643 843 aa11.67□□□□□ -0.54
NSMCE2-202ENST00000517315 RGL2O15211 777 aa11.63□□□□□ -0.55
NSMCE2-202ENST00000517315 VGFO15240 615 aaPredicted RBP11.62□□□□□ -0.55
NSMCE2-202ENST00000517315 IER5LQ5T953 404 aa11.61□□□□□ -0.55
NSMCE2-202ENST00000517315 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
NSMCE2-202ENST00000517315 POTEFA5A3E0 1075 aa11.59□□□□□ -0.55
NSMCE2-202ENST00000517315 ZFP91Q96JP5 570 aaPredicted RBP11.59□□□□□ -0.55
NSMCE2-202ENST00000517315 GOLGA2Q08379 1002 aa11.58□□□□□ -0.56
NSMCE2-202ENST00000517315 POTEB2H3BUK9 544 aa11.57□□□□□ -0.56
NSMCE2-202ENST00000517315 CABP2Q9NPB3 220 aa11.57□□□□□ -0.56
NSMCE2-202ENST00000517315 COLQQ9Y215 455 aaPredicted RBP11.57□□□□□ -0.56
NSMCE2-202ENST00000517315 SEC24BO95487 1268 aa11.56□□□□□ -0.56
NSMCE2-202ENST00000517315 TAOK2Q9UL54 1235 aa11.56□□□□□ -0.56
NSMCE2-202ENST00000517315 MKRN3Q13064 507 aaKnown RBP11.55□□□□□ -0.56
NSMCE2-202ENST00000517315 IRX5P78411 483 aaPredicted RBP11.54□□□□□ -0.56
NSMCE2-202ENST00000517315 PLCG2P16885 1265 aa11.51□□□□□ -0.57
NSMCE2-202ENST00000517315 BCL11BQ9C0K0 894 aaPredicted RBP11.5□□□□□ -0.57
NSMCE2-202ENST00000517315 OCEL1Q9H607 264 aa11.49□□□□□ -0.57
NSMCE2-202ENST00000517315 STK25O00506 426 aa11.48□□□□□ -0.57
NSMCE2-202ENST00000517315 POTEJP0CG39 1038 aa11.48□□□□□ -0.57
NSMCE2-202ENST00000517315 EFCAB3Q8N7B9 438 aa11.48□□□□□ -0.57
NSMCE2-202ENST00000517315 STK24Q9Y6E0 443 aa11.48□□□□□ -0.57
NSMCE2-202ENST00000517315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.47□□□□□ -0.573e-8■■■■□ 25.3
NSMCE2-202ENST00000517315 AMER1Q5JTC6 1135 aaPredicted RBP11.45□□□□□ -0.58
NSMCE2-202ENST00000517315 PDCD7Q8N8D1 485 aaKnown RBP11.45□□□□□ -0.58
NSMCE2-202ENST00000517315 ILDR1Q86SU0 546 aaPredicted RBP11.43□□□□□ -0.58
NSMCE2-202ENST00000517315 OTUD5Q96G74 571 aa11.42□□□□□ -0.58
NSMCE2-202ENST00000517315 RTN4Q9NQC3 1192 aaKnown RBP11.42□□□□□ -0.58
NSMCE2-202ENST00000517315 SOX12O15370 315 aa11.39□□□□□ -0.59
NSMCE2-202ENST00000517315 MAMSTRQ6ZN01 415 aa11.38□□□□□ -0.59
NSMCE2-202ENST00000517315 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
NSMCE2-202ENST00000517315 CHGAP10645 457 aaKnown RBP11.37□□□□□ -0.59
NSMCE2-202ENST00000517315 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
NSMCE2-202ENST00000517315 PHF8Q9UPP1 1060 aa11.37□□□□□ -0.59
NSMCE2-202ENST00000517315 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
NSMCE2-202ENST00000517315 SCUBE2Q9NQ36 999 aa11.36□□□□□ -0.59
NSMCE2-202ENST00000517315 POTEMA6NI47 508 aa11.35□□□□□ -0.59
NSMCE2-202ENST00000517315 L3MBTL3Q96JM7 780 aaPredicted RBP11.33□□□□□ -0.6
NSMCE2-202ENST00000517315 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
NSMCE2-202ENST00000517315 MFRPQ9BY79 579 aa11.33□□□□□ -0.6
NSMCE2-202ENST00000517315 ABCC9O60706 1549 aa11.33□□□□□ -0.6
NSMCE2-202ENST00000517315 NLRP6P59044 892 aa11.31□□□□□ -0.6
NSMCE2-202ENST00000517315 FBXO22Q8NEZ5 403 aa11.31□□□□□ -0.6
NSMCE2-202ENST00000517315 POTEGQ6S5H5 508 aa11.28□□□□□ -0.6
NSMCE2-202ENST00000517315 BOLA1Q9Y3E2 137 aa11.27□□□□□ -0.61
NSMCE2-202ENST00000517315 G3V3G9 751 aa11.26□□□□□ -0.61
NSMCE2-202ENST00000517315 C3orf67Q6ZVT6 689 aa11.25□□□□□ -0.61
NSMCE2-202ENST00000517315 DNAJC5Q9H3Z4 198 aa11.25□□□□□ -0.61
NSMCE2-202ENST00000517315 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.25□□□□□ -0.61
NSMCE2-202ENST00000517315 NKX1-1Q15270 411 aaPredicted RBP11.23□□□□□ -0.61
NSMCE2-202ENST00000517315 SLAIN1Q8ND83 568 aa11.23□□□□□ -0.61
NSMCE2-202ENST00000517315 MICALL2Q8IY33 904 aa11.21□□□□□ -0.61
NSMCE2-202ENST00000517315 TMEM121BQ9BXQ6 578 aaPredicted RBP11.21□□□□□ -0.61
NSMCE2-202ENST00000517315 ZCCHC6Q5VYS8 1495 aaKnown RBP11.19□□□□□ -0.62
NSMCE2-202ENST00000517315 PCDH10Q9P2E7 1040 aa11.18□□□□□ -0.62
NSMCE2-202ENST00000517315 PPP1R37O75864 691 aa11.16□□□□□ -0.62
NSMCE2-202ENST00000517315 RYDENQ9NUL5 291 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms