RNA–Protein interactions for RNA: ENST00000517146.1

RNU4ATAC9P-201, Transcript of RNA, U4atac small nuclear 9, pseudogene, humanhuman

BASIC

Gene RNU4ATAC9P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC9P-201ENST00000517146 PELP1Q8IZL8 1130 aaKnown RBP4.18□□□□□ -1.74
RNU4ATAC9P-201ENST00000517146 STAG3Q9UJ98 1225 aa4.18□□□□□ -1.74
RNU4ATAC9P-201ENST00000517146 ATMINO43313 823 aaPredicted RBP4.16□□□□□ -1.74
RNU4ATAC9P-201ENST00000517146 CREBZFQ9NS37 354 aa4.15□□□□□ -1.75
RNU4ATAC9P-201ENST00000517146 POTEJP0CG39 1038 aa4.14□□□□□ -1.75
RNU4ATAC9P-201ENST00000517146 MMRN1Q13201 1228 aa4.14□□□□□ -1.75
RNU4ATAC9P-201ENST00000517146 MS4A3Q96HJ5 214 aa4.14□□□□□ -1.75
RNU4ATAC9P-201ENST00000517146 SEC24BO95487 1268 aa4.12□□□□□ -1.75
RNU4ATAC9P-201ENST00000517146 SPNS2Q8IVW8 549 aa4.1□□□□□ -1.75
RNU4ATAC9P-201ENST00000517146 ZBTB22O15209 634 aa4.09□□□□□ -1.75
RNU4ATAC9P-201ENST00000517146 ATN1P54259 1190 aaPredicted RBP4.09□□□□□ -1.75
RNU4ATAC9P-201ENST00000517146 SLAIN1Q8ND83 568 aa4.08□□□□□ -1.76
RNU4ATAC9P-201ENST00000517146 ST18O60284 1047 aa4.07□□□□□ -1.76
RNU4ATAC9P-201ENST00000517146 TMEM121BQ9BXQ6 578 aaPredicted RBP4.07□□□□□ -1.76
RNU4ATAC9P-201ENST00000517146 SNPHO15079 494 aa4.05□□□□□ -1.76
RNU4ATAC9P-201ENST00000517146 TIE1P35590 1138 aa4.04□□□□□ -1.76
RNU4ATAC9P-201ENST00000517146 TSPYL2Q9H2G4 693 aaPredicted RBP4.04□□□□□ -1.76
RNU4ATAC9P-201ENST00000517146 BMP2KQ9NSY1 1161 aaPredicted RBP4.03□□□□□ -1.76
RNU4ATAC9P-201ENST00000517146 IER5LQ5T953 404 aa4.02□□□□□ -1.77
RNU4ATAC9P-201ENST00000517146 POTEFA5A3E0 1075 aa4.01□□□□□ -1.77
RNU4ATAC9P-201ENST00000517146 PLCG2P16885 1265 aa4□□□□□ -1.77
RNU4ATAC9P-201ENST00000517146 COLQQ9Y215 455 aaPredicted RBP4□□□□□ -1.77
RNU4ATAC9P-201ENST00000517146 EMP3P54852 163 aa3.99□□□□□ -1.77
RNU4ATAC9P-201ENST00000517146 MARVELD3Q96A59 401 aa3.99□□□□□ -1.77
RNU4ATAC9P-201ENST00000517146 KIF12Q96FN5 646 aa3.99□□□□□ -1.77
RNU4ATAC9P-201ENST00000517146 CCDC61Q9Y6R9 512 aa3.99□□□□□ -1.77
RNU4ATAC9P-201ENST00000517146 TTLL13PA6NNM8 815 aa3.98□□□□□ -1.77
RNU4ATAC9P-201ENST00000517146 PLEKHG5O94827 1062 aa3.98□□□□□ -1.77
RNU4ATAC9P-201ENST00000517146 MNX1P50219 401 aaPredicted RBP3.98□□□□□ -1.77
RNU4ATAC9P-201ENST00000517146 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.97□□□□□ -1.77
RNU4ATAC9P-201ENST00000517146 TRIM35Q9UPQ4 493 aa3.97□□□□□ -1.77
RNU4ATAC9P-201ENST00000517146 SPDYE4A6NLX3 237 aa3.95□□□□□ -1.78
RNU4ATAC9P-201ENST00000517146 MAP3K13O43283 966 aa3.95□□□□□ -1.78
RNU4ATAC9P-201ENST00000517146 TRPC6Q9Y210 931 aa3.94□□□□□ -1.78
RNU4ATAC9P-201ENST00000517146 C3orf67Q6ZVT6 689 aa3.92□□□□□ -1.78
RNU4ATAC9P-201ENST00000517146 RNF166Q96A37 237 aaPredicted RBP3.92□□□□□ -1.78
RNU4ATAC9P-201ENST00000517146 PCDHB13Q9Y5F0 798 aa3.92□□□□□ -1.78
RNU4ATAC9P-201ENST00000517146 FAM205CA6NFA0 338 aa3.91□□□□□ -1.78
RNU4ATAC9P-201ENST00000517146 HS3ST6Q96QI5 342 aa3.91□□□□□ -1.78
RNU4ATAC9P-201ENST00000517146 SGIP1Q9BQI5 828 aa3.91□□□□□ -1.78
RNU4ATAC9P-201ENST00000517146 TMEM106CQ9BVX2 250 aa3.9□□□□□ -1.79
RNU4ATAC9P-201ENST00000517146 KRTAP3-3Q9BYR6 98 aa3.89□□□□□ -1.79
RNU4ATAC9P-201ENST00000517146 KRTAP3-2Q9BYR7 98 aa3.89□□□□□ -1.79
RNU4ATAC9P-201ENST00000517146 OCEL1Q9H607 264 aa3.88□□□□□ -1.79
RNU4ATAC9P-201ENST00000517146 MYT1LQ9UL68 1186 aa3.87□□□□□ -1.79
RNU4ATAC9P-201ENST00000517146 IRX5P78411 483 aaPredicted RBP3.86□□□□□ -1.79
RNU4ATAC9P-201ENST00000517146 RASEFQ8IZ41 740 aa3.85□□□□□ -1.79
RNU4ATAC9P-201ENST00000517146 PTGER2P43116 358 aa3.84□□□□□ -1.79
RNU4ATAC9P-201ENST00000517146 GOLGA2Q08379 1002 aa3.84□□□□□ -1.79
RNU4ATAC9P-201ENST00000517146 L3MBTL3Q96JM7 780 aaPredicted RBP3.84□□□□□ -1.79
RNU4ATAC9P-201ENST00000517146 ZBTB47Q9UFB7 747 aaPredicted RBP3.84□□□□□ -1.79
RNU4ATAC9P-201ENST00000517146 IFNL1Q8IU54 200 aa3.83□□□□□ -1.8
RNU4ATAC9P-201ENST00000517146 MIER1Q8N108 512 aa3.83□□□□□ -1.8
RNU4ATAC9P-201ENST00000517146 ZNF710Q8N1W2 664 aa3.83□□□□□ -1.8
RNU4ATAC9P-201ENST00000517146 FAM212AQ96EL1 285 aa3.83□□□□□ -1.8
RNU4ATAC9P-201ENST00000517146 ERBB3P21860 1342 aa3.83□□□□□ -1.8
RNU4ATAC9P-201ENST00000517146 G3V3G9 751 aa3.82□□□□□ -1.8
RNU4ATAC9P-201ENST00000517146 DCAF8Q5TAQ9 597 aa3.82□□□□□ -1.8
RNU4ATAC9P-201ENST00000517146 POTEB3A0JP26 581 aa3.81□□□□□ -1.8
RNU4ATAC9P-201ENST00000517146 POTEBQ6S5H4 581 aa3.81□□□□□ -1.8
RNU4ATAC9P-201ENST00000517146 RIMBP2O15034 1052 aa3.8□□□□□ -1.8
RNU4ATAC9P-201ENST00000517146 MKRN3Q13064 507 aaKnown RBP3.79□□□□□ -1.8
RNU4ATAC9P-201ENST00000517146 DOK7Q18PE1 504 aa3.79□□□□□ -1.8
RNU4ATAC9P-201ENST00000517146 PLCD3Q8N3E9 789 aa3.79□□□□□ -1.8
RNU4ATAC9P-201ENST00000517146 VARS2Q5ST30 1063 aaKnown RBP3.77□□□□□ -1.81
RNU4ATAC9P-201ENST00000517146 PLA2G2EQ9NZK7 142 aa3.77□□□□□ -1.81
RNU4ATAC9P-201ENST00000517146 HOXB1P14653 301 aaPredicted RBP3.76□□□□□ -1.81
RNU4ATAC9P-201ENST00000517146 PDCD7Q8N8D1 485 aaKnown RBP3.74□□□□□ -1.81
RNU4ATAC9P-201ENST00000517146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.74□□□□□ -1.81
RNU4ATAC9P-201ENST00000517146 ANKRD13DQ6ZTN6 518 aa3.73□□□□□ -1.81
RNU4ATAC9P-201ENST00000517146 ZNF687Q8N1G0 1237 aa3.72□□□□□ -1.81
RNU4ATAC9P-201ENST00000517146 HCSTQ9UBK5 93 aa3.72□□□□□ -1.81
RNU4ATAC9P-201ENST00000517146 HOXB3P14651 431 aaPredicted RBP3.71□□□□□ -1.82
RNU4ATAC9P-201ENST00000517146 NUBP1P53384 320 aa3.71□□□□□ -1.82
RNU4ATAC9P-201ENST00000517146 PROM2Q8N271 834 aa3.71□□□□□ -1.82
RNU4ATAC9P-201ENST00000517146 PYGBP11216 843 aa3.7□□□□□ -1.82
RNU4ATAC9P-201ENST00000517146 ZNF467Q7Z7K2 595 aaPredicted RBP3.7□□□□□ -1.82
RNU4ATAC9P-201ENST00000517146 ZSWIM6Q9HCJ5 1215 aa3.7□□□□□ -1.82
RNU4ATAC9P-201ENST00000517146 PCDHB8Q9UN66 801 aa3.7□□□□□ -1.82
RNU4ATAC9P-201ENST00000517146 IRX2Q9BZI1 471 aaPredicted RBP3.69□□□□□ -1.82
RNU4ATAC9P-201ENST00000517146 BOLA1Q9Y3E2 137 aa3.69□□□□□ -1.82
RNU4ATAC9P-201ENST00000517146 LSM11P83369 360 aaKnown RBP eCLIP3.67□□□□□ -1.82
RNU4ATAC9P-201ENST00000517146 RGS20O76081 388 aa3.65□□□□□ -1.83
RNU4ATAC9P-201ENST00000517146 PBX2P40425 430 aa3.65□□□□□ -1.83
RNU4ATAC9P-201ENST00000517146 PSEN1P49768 467 aa3.64□□□□□ -1.83
RNU4ATAC9P-201ENST00000517146 GSE1Q14687 1217 aa3.62□□□□□ -1.83
RNU4ATAC9P-201ENST00000517146 PDAP1Q13442 181 aaKnown RBP3.61□□□□□ -1.83
RNU4ATAC9P-201ENST00000517146 DPY19L2Q6NUT2 758 aa3.61□□□□□ -1.83
RNU4ATAC9P-201ENST00000517146 STAC3Q96MF2 364 aa3.61□□□□□ -1.83
RNU4ATAC9P-201ENST00000517146 ZNF316A6NFI3 1004 aaPredicted RBP3.6□□□□□ -1.83
RNU4ATAC9P-201ENST00000517146 Q6ZNB5 142 aa3.6□□□□□ -1.83
RNU4ATAC9P-201ENST00000517146 CABP2Q9NPB3 220 aa3.6□□□□□ -1.83
RNU4ATAC9P-201ENST00000517146 GPR153Q6NV75 609 aa3.59□□□□□ -1.83
RNU4ATAC9P-201ENST00000517146 ILDR1Q86SU0 546 aaPredicted RBP3.59□□□□□ -1.83
RNU4ATAC9P-201ENST00000517146 CSRNP3Q8WYN3 585 aa3.59□□□□□ -1.83
RNU4ATAC9P-201ENST00000517146 ARSIQ5FYB1 569 aa3.58□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 ADGRD1Q6QNK2 874 aa3.56□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 KCTD12Q96CX2 325 aaKnown RBP3.56□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 CHRM1P11229 460 aaPredicted RBP3.55□□□□□ -1.84
RNU4ATAC9P-201ENST00000517146 MICALL2Q8IY33 904 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms