RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 DCAF8Q5TAQ9 597 aa15.83■□□□□ 0.12
SCARNA1-201ENST00000517138 ZNF579Q8NAF0 562 aaKnown RBP15.82■□□□□ 0.12
SCARNA1-201ENST00000517138 FAM212AQ96EL1 285 aa15.82■□□□□ 0.12
SCARNA1-201ENST00000517138 CIZ1Q9ULV3 898 aaPredicted RBP15.75■□□□□ 0.11
SCARNA1-201ENST00000517138 GABBR2O75899 941 aa15.74■□□□□ 0.11
SCARNA1-201ENST00000517138 PYGBP11216 843 aa15.7■□□□□ 0.1
SCARNA1-201ENST00000517138 GSE1Q14687 1217 aa15.7■□□□□ 0.1
SCARNA1-201ENST00000517138 KIF12Q96FN5 646 aa15.7■□□□□ 0.1
SCARNA1-201ENST00000517138 MAP3K13O43283 966 aa15.67■□□□□ 0.1
SCARNA1-201ENST00000517138 GALR2O43603 387 aaPredicted RBP15.67■□□□□ 0.1
SCARNA1-201ENST00000517138 MS4A3Q96HJ5 214 aa15.64■□□□□ 0.09
SCARNA1-201ENST00000517138 PKD2Q13563 968 aa15.59■□□□□ 0.09
SCARNA1-201ENST00000517138 TRPC6Q9Y210 931 aa15.57■□□□□ 0.08
SCARNA1-201ENST00000517138 PCDHB13Q9Y5F0 798 aa15.56■□□□□ 0.08
SCARNA1-201ENST00000517138 IFNL1Q8IU54 200 aa15.54■□□□□ 0.08
SCARNA1-201ENST00000517138 CHRM1P11229 460 aaPredicted RBP15.53■□□□□ 0.08
SCARNA1-201ENST00000517138 CLCN6P51797 869 aa15.52■□□□□ 0.08
SCARNA1-201ENST00000517138 PCDHB8Q9UN66 801 aa15.52■□□□□ 0.08
SCARNA1-201ENST00000517138 POTEIP0CG38 1075 aa15.49■□□□□ 0.07
SCARNA1-201ENST00000517138 SGIP1Q9BQI5 828 aa15.47■□□□□ 0.07
SCARNA1-201ENST00000517138 RNF25Q96BH1 459 aaPredicted RBP15.46■□□□□ 0.07
SCARNA1-201ENST00000517138 ECM2O94769 699 aaPredicted RBP15.45■□□□□ 0.06
SCARNA1-201ENST00000517138 TRIM41Q8WV44 630 aa15.43■□□□□ 0.06
SCARNA1-201ENST00000517138 DCBLD2Q96PD2 775 aa15.39■□□□□ 0.05
SCARNA1-201ENST00000517138 BMP2KQ9NSY1 1161 aaPredicted RBP15.39■□□□□ 0.05
SCARNA1-201ENST00000517138 RGL2O15211 777 aa15.38■□□□□ 0.05
SCARNA1-201ENST00000517138 RTN4Q9NQC3 1192 aaKnown RBP15.38■□□□□ 0.05
SCARNA1-201ENST00000517138 ZNF467Q7Z7K2 595 aaPredicted RBP15.37■□□□□ 0.05
SCARNA1-201ENST00000517138 ATMINO43313 823 aaPredicted RBP15.34■□□□□ 0.05
SCARNA1-201ENST00000517138 PELP1Q8IZL8 1130 aaKnown RBP15.34■□□□□ 0.05
SCARNA1-201ENST00000517138 TTLL13PA6NNM8 815 aa15.32■□□□□ 0.04
SCARNA1-201ENST00000517138 TIE1P35590 1138 aa15.32■□□□□ 0.04
SCARNA1-201ENST00000517138 ATN1P54259 1190 aaPredicted RBP15.32■□□□□ 0.04
SCARNA1-201ENST00000517138 ASTLQ6HA08 431 aaPredicted RBP15.32■□□□□ 0.04
SCARNA1-201ENST00000517138 RIOK3O14730 519 aaKnown RBP15.3■□□□□ 0.04
SCARNA1-201ENST00000517138 TMEM106CQ9BVX2 250 aa15.3■□□□□ 0.04
SCARNA1-201ENST00000517138 PSEN1P49768 467 aa15.29■□□□□ 0.04
SCARNA1-201ENST00000517138 AMER1Q5JTC6 1135 aaPredicted RBP15.27■□□□□ 0.04
SCARNA1-201ENST00000517138 PDAP1Q13442 181 aaKnown RBP15.25■□□□□ 0.03
SCARNA1-201ENST00000517138 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
SCARNA1-201ENST00000517138 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.21■□□□□ 0.03
SCARNA1-201ENST00000517138 ZFP91Q96JP5 570 aaPredicted RBP15.21■□□□□ 0.03
SCARNA1-201ENST00000517138 VGFO15240 615 aaPredicted RBP15.19■□□□□ 0.02
SCARNA1-201ENST00000517138 CABP2Q9NPB3 220 aa15.12■□□□□ 0.01
SCARNA1-201ENST00000517138 POTEFA5A3E0 1075 aa15.1■□□□□ 0.01
SCARNA1-201ENST00000517138 BCL11BQ9C0K0 894 aaPredicted RBP15.1■□□□□ 0.01
SCARNA1-201ENST00000517138 METRNQ9UJH8 293 aa15.1■□□□□ 0.01
SCARNA1-201ENST00000517138 SLC39A7Q92504 469 aa15.08■□□□□ 0
SCARNA1-201ENST00000517138 STK25O00506 426 aa15.07■□□□□ 0
SCARNA1-201ENST00000517138 COLQQ9Y215 455 aaPredicted RBP15.06■□□□□ 0
SCARNA1-201ENST00000517138 STK24Q9Y6E0 443 aa15.06■□□□□ 0
SCARNA1-201ENST00000517138 DCAF8L2P0C7V8 631 aa15.05■□□□□ -0
SCARNA1-201ENST00000517138 C7P10643 843 aa15.04■□□□□ -0
SCARNA1-201ENST00000517138 EFCAB3Q8N7B9 438 aa15.04■□□□□ -0
SCARNA1-201ENST00000517138 TAOK2Q9UL54 1235 aa15.03■□□□□ -0
SCARNA1-201ENST00000517138 POTEB2H3BUK9 544 aa15.02■□□□□ -0
SCARNA1-201ENST00000517138 CHGAP10645 457 aaKnown RBP15.01□□□□□ -0.01
SCARNA1-201ENST00000517138 GOLGA2Q08379 1002 aa15.01□□□□□ -0.01
SCARNA1-201ENST00000517138 IRX5P78411 483 aaPredicted RBP15□□□□□ -0.01
SCARNA1-201ENST00000517138 IER5LQ5T953 404 aa15□□□□□ -0.01
SCARNA1-201ENST00000517138 MKRN3Q13064 507 aaKnown RBP14.99□□□□□ -0.01
SCARNA1-201ENST00000517138 HS6ST3Q8IZP7 471 aa14.96□□□□□ -0.01
SCARNA1-201ENST00000517138 SEC24BO95487 1268 aa14.95□□□□□ -0.02
SCARNA1-201ENST00000517138 POTEJP0CG39 1038 aa14.93□□□□□ -0.02
SCARNA1-201ENST00000517138 PDCD7Q8N8D1 485 aaKnown RBP14.93□□□□□ -0.02
SCARNA1-201ENST00000517138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.93□□□□□ -0.02
SCARNA1-201ENST00000517138 OCEL1Q9H607 264 aa14.91□□□□□ -0.02
SCARNA1-201ENST00000517138 PHF8Q9UPP1 1060 aa14.91□□□□□ -0.02
SCARNA1-201ENST00000517138 PLCG2P16885 1265 aa14.9□□□□□ -0.02
SCARNA1-201ENST00000517138 DPY19L2Q6NUT2 758 aa14.9□□□□□ -0.02
SCARNA1-201ENST00000517138 ILDR1Q86SU0 546 aaPredicted RBP14.9□□□□□ -0.02
SCARNA1-201ENST00000517138 LHX8Q68G74 356 aa14.89□□□□□ -0.03
SCARNA1-201ENST00000517138 NKX1-1Q15270 411 aaPredicted RBP14.88□□□□□ -0.03
SCARNA1-201ENST00000517138 MFRPQ9BY79 579 aa14.87□□□□□ -0.03
SCARNA1-201ENST00000517138 MS4A4AQ96JQ5 239 aa14.86□□□□□ -0.03
SCARNA1-201ENST00000517138 SOX12O15370 315 aa14.84□□□□□ -0.03
SCARNA1-201ENST00000517138 FBXO22Q8NEZ5 403 aa14.83□□□□□ -0.04
SCARNA1-201ENST00000517138 DNAJC5Q9H3Z4 198 aa14.79□□□□□ -0.04
SCARNA1-201ENST00000517138 NLRP6P59044 892 aa14.76□□□□□ -0.05
SCARNA1-201ENST00000517138 OTUD5Q96G74 571 aa14.75□□□□□ -0.05
SCARNA1-201ENST00000517138 PPP1R37O75864 691 aa14.71□□□□□ -0.05
SCARNA1-201ENST00000517138 GTPBP6O43824 516 aaPredicted RBP14.66□□□□□ -0.06
SCARNA1-201ENST00000517138 BOLA1Q9Y3E2 137 aa14.66□□□□□ -0.06
SCARNA1-201ENST00000517138 BBXQ8WY36 941 aaPredicted RBP14.65□□□□□ -0.06
SCARNA1-201ENST00000517138 L3MBTL3Q96JM7 780 aaPredicted RBP14.65□□□□□ -0.06
SCARNA1-201ENST00000517138 MICALL2Q8IY33 904 aa14.63□□□□□ -0.07
SCARNA1-201ENST00000517138 TMEM121BQ9BXQ6 578 aaPredicted RBP14.61□□□□□ -0.07
SCARNA1-201ENST00000517138 MAMSTRQ6ZN01 415 aa14.59□□□□□ -0.07
SCARNA1-201ENST00000517138 SCUBE2Q9NQ36 999 aa14.59□□□□□ -0.07
SCARNA1-201ENST00000517138 G3V3G9 751 aa14.55□□□□□ -0.08
SCARNA1-201ENST00000517138 TMEM92Q6UXU6 159 aa14.54□□□□□ -0.08
SCARNA1-201ENST00000517138 C3orf67Q6ZVT6 689 aa14.54□□□□□ -0.08
SCARNA1-201ENST00000517138 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.54□□□□□ -0.08
SCARNA1-201ENST00000517138 SLAIN1Q8ND83 568 aa14.52□□□□□ -0.09
SCARNA1-201ENST00000517138 PAXIP1Q6ZW49 1069 aaPredicted RBP14.51□□□□□ -0.09
SCARNA1-201ENST00000517138 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.5□□□□□ -0.09
SCARNA1-201ENST00000517138 CFAP44Q96MT7 982 aa14.49□□□□□ -0.09
SCARNA1-201ENST00000517138 RYDENQ9NUL5 291 aaKnown RBP14.48□□□□□ -0.09
SCARNA1-201ENST00000517138 SPRYD3Q8NCJ5 442 aa14.47□□□□□ -0.09
SCARNA1-201ENST00000517138 CADPS2Q86UW7 1296 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms