RNA–Protein interactions for RNA: ENST00000517052.1

RNU6-448P-201, Transcript of RNA, U6 small nuclear 448, pseudogene, humanhuman

BASIC

Gene RNU6-448P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-448P-201ENST00000517052 PAK3O75914 559 aaPredicted RBP4.81□□□□□ -1.64
RNU6-448P-201ENST00000517052 KRTAP3-3Q9BYR6 98 aa4.8□□□□□ -1.64
RNU6-448P-201ENST00000517052 KRTAP3-2Q9BYR7 98 aa4.8□□□□□ -1.64
RNU6-448P-201ENST00000517052 ATN1P54259 1190 aaPredicted RBP4.79□□□□□ -1.64
RNU6-448P-201ENST00000517052 PABPN1Q86U42 306 aaKnown RBP eCLIP4.79□□□□□ -1.64
RNU6-448P-201ENST00000517052 SLAIN1Q8ND83 568 aa4.79□□□□□ -1.64
RNU6-448P-201ENST00000517052 MS4A3Q96HJ5 214 aa4.79□□□□□ -1.64
RNU6-448P-201ENST00000517052 MARVELD3Q96A59 401 aa4.77□□□□□ -1.65
RNU6-448P-201ENST00000517052 COLQQ9Y215 455 aaPredicted RBP4.73□□□□□ -1.65
RNU6-448P-201ENST00000517052 RNF166Q96A37 237 aaPredicted RBP4.72□□□□□ -1.65
RNU6-448P-201ENST00000517052 CREBZFQ9NS37 354 aa4.72□□□□□ -1.65
RNU6-448P-201ENST00000517052 SNPHO15079 494 aa4.71□□□□□ -1.66
RNU6-448P-201ENST00000517052 SEC24BO95487 1268 aa4.71□□□□□ -1.66
RNU6-448P-201ENST00000517052 MKRN4PQ13434 485 aaPredicted RBP4.71□□□□□ -1.66
RNU6-448P-201ENST00000517052 POTEB3A0JP26 581 aa4.69□□□□□ -1.66
RNU6-448P-201ENST00000517052 POTEBQ6S5H4 581 aa4.69□□□□□ -1.66
RNU6-448P-201ENST00000517052 EMP3P54852 163 aa4.67□□□□□ -1.66
RNU6-448P-201ENST00000517052 HS3ST6Q96QI5 342 aa4.67□□□□□ -1.66
RNU6-448P-201ENST00000517052 BMP2KQ9NSY1 1161 aaPredicted RBP4.67□□□□□ -1.66
RNU6-448P-201ENST00000517052 FAM205CA6NFA0 338 aa4.63□□□□□ -1.67
RNU6-448P-201ENST00000517052 MYT1LQ9UL68 1186 aa4.62□□□□□ -1.67
RNU6-448P-201ENST00000517052 TIE1P35590 1138 aa4.61□□□□□ -1.67
RNU6-448P-201ENST00000517052 IER5LQ5T953 404 aa4.61□□□□□ -1.67
RNU6-448P-201ENST00000517052 NPM1P06748 294 aaKnown RBP eCLIP4.6□□□□□ -1.67
RNU6-448P-201ENST00000517052 KCNA4P22459 653 aa4.59□□□□□ -1.67
RNU6-448P-201ENST00000517052 TRPC6Q9Y210 931 aa4.58□□□□□ -1.68
RNU6-448P-201ENST00000517052 TTLL13PA6NNM8 815 aa4.55□□□□□ -1.68
RNU6-448P-201ENST00000517052 KIF12Q96FN5 646 aa4.55□□□□□ -1.68
RNU6-448P-201ENST00000517052 MNX1P50219 401 aaPredicted RBP4.54□□□□□ -1.68
RNU6-448P-201ENST00000517052 FOXD4L1Q9NU39 408 aa4.54□□□□□ -1.68
RNU6-448P-201ENST00000517052 PLA2G2EQ9NZK7 142 aa4.53□□□□□ -1.68
RNU6-448P-201ENST00000517052 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.52□□□□□ -1.69
RNU6-448P-201ENST00000517052 TRIM35Q9UPQ4 493 aa4.52□□□□□ -1.69
RNU6-448P-201ENST00000517052 CCDC61Q9Y6R9 512 aa4.52□□□□□ -1.69
RNU6-448P-201ENST00000517052 STAG3Q9UJ98 1225 aa4.51□□□□□ -1.69
RNU6-448P-201ENST00000517052 PLCG2P16885 1265 aa4.5□□□□□ -1.69
RNU6-448P-201ENST00000517052 ATXN8OSP0DMR3 200 aa4.49□□□□□ -1.69
RNU6-448P-201ENST00000517052 PTGER2P43116 358 aa4.49□□□□□ -1.69
RNU6-448P-201ENST00000517052 MAP3K13O43283 966 aa4.47□□□□□ -1.69
RNU6-448P-201ENST00000517052 IRX2Q9BZI1 471 aaPredicted RBP4.47□□□□□ -1.69
RNU6-448P-201ENST00000517052 TSPYL2Q9H2G4 693 aaPredicted RBP4.47□□□□□ -1.69
RNU6-448P-201ENST00000517052 IRX5P78411 483 aaPredicted RBP4.44□□□□□ -1.7
RNU6-448P-201ENST00000517052 ERBB3P21860 1342 aa4.41□□□□□ -1.7
RNU6-448P-201ENST00000517052 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.71
RNU6-448P-201ENST00000517052 RGS20O76081 388 aa4.4□□□□□ -1.71
RNU6-448P-201ENST00000517052 KRTAP4-6Q9BYQ5 205 aa4.4□□□□□ -1.71
RNU6-448P-201ENST00000517052 OCEL1Q9H607 264 aa4.4□□□□□ -1.71
RNU6-448P-201ENST00000517052 HOXB1P14653 301 aaPredicted RBP4.38□□□□□ -1.71
RNU6-448P-201ENST00000517052 HCSTQ9UBK5 93 aa4.37□□□□□ -1.71
RNU6-448P-201ENST00000517052 ZNF687Q8N1G0 1237 aa4.36□□□□□ -1.71
RNU6-448P-201ENST00000517052 VARS2Q5ST30 1063 aaKnown RBP4.35□□□□□ -1.71
RNU6-448P-201ENST00000517052 C3orf67Q6ZVT6 689 aa4.35□□□□□ -1.71
RNU6-448P-201ENST00000517052 SGIP1Q9BQI5 828 aa4.35□□□□□ -1.71
RNU6-448P-201ENST00000517052 HOXB3P14651 431 aaPredicted RBP4.34□□□□□ -1.71
RNU6-448P-201ENST00000517052 ANKRD13DQ6ZTN6 518 aa4.33□□□□□ -1.72
RNU6-448P-201ENST00000517052 TMEM106CQ9BVX2 250 aa4.33□□□□□ -1.72
RNU6-448P-201ENST00000517052 Q6ZNB5 142 aa4.31□□□□□ -1.72
RNU6-448P-201ENST00000517052 PCDHB13Q9Y5F0 798 aa4.31□□□□□ -1.72
RNU6-448P-201ENST00000517052 ZNF710Q8N1W2 664 aa4.3□□□□□ -1.72
RNU6-448P-201ENST00000517052 L3MBTL3Q96JM7 780 aaPredicted RBP4.28□□□□□ -1.72
RNU6-448P-201ENST00000517052 IFNL1Q8IU54 200 aa4.26□□□□□ -1.73
RNU6-448P-201ENST00000517052 LSM11P83369 360 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNU6-448P-201ENST00000517052 PDCD7Q8N8D1 485 aaKnown RBP4.25□□□□□ -1.73
RNU6-448P-201ENST00000517052 DOK7Q18PE1 504 aa4.24□□□□□ -1.73
RNU6-448P-201ENST00000517052 RASEFQ8IZ41 740 aa4.23□□□□□ -1.73
RNU6-448P-201ENST00000517052 LCE2BO14633 110 aa4.21□□□□□ -1.74
RNU6-448P-201ENST00000517052 IFFO2Q5TF58 517 aa4.21□□□□□ -1.74
RNU6-448P-201ENST00000517052 RIMBP2O15034 1052 aa4.2□□□□□ -1.74
RNU6-448P-201ENST00000517052 ZBTB22O15209 634 aa4.2□□□□□ -1.74
RNU6-448P-201ENST00000517052 A0A0G2JS52 829 aa4.18□□□□□ -1.74
RNU6-448P-201ENST00000517052 TRAF7Q6Q0C0 670 aa4.18□□□□□ -1.74
RNU6-448P-201ENST00000517052 ZNF775Q96BV0 537 aaPredicted RBP4.18□□□□□ -1.74
RNU6-448P-201ENST00000517052 ZSWIM6Q9HCJ5 1215 aa4.17□□□□□ -1.74
RNU6-448P-201ENST00000517052 SLC4A1APQ9BWU0 796 aaKnown RBP4.16□□□□□ -1.74
RNU6-448P-201ENST00000517052 LAPTM4AQ15012 233 aa4.14□□□□□ -1.75
RNU6-448P-201ENST00000517052 GPR153Q6NV75 609 aa4.14□□□□□ -1.75
RNU6-448P-201ENST00000517052 ZNF787Q6DD87 383 aa4.12□□□□□ -1.75
RNU6-448P-201ENST00000517052 PBX2P40425 430 aa4.11□□□□□ -1.75
RNU6-448P-201ENST00000517052 ZNF316A6NFI3 1004 aaPredicted RBP4.09□□□□□ -1.75
RNU6-448P-201ENST00000517052 MKRN3Q13064 507 aaKnown RBP4.09□□□□□ -1.75
RNU6-448P-201ENST00000517052 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.09□□□□□ -1.75
RNU6-448P-201ENST00000517052 POTEEQ6S8J3 1075 aa4.08□□□□□ -1.76
RNU6-448P-201ENST00000517052 SPDYE4A6NLX3 237 aa4.07□□□□□ -1.76
RNU6-448P-201ENST00000517052 ADGRD1Q6QNK2 874 aa4.07□□□□□ -1.76
RNU6-448P-201ENST00000517052 KCTD12Q96CX2 325 aaKnown RBP4.07□□□□□ -1.76
RNU6-448P-201ENST00000517052 BOLA1Q9Y3E2 137 aa4.07□□□□□ -1.76
RNU6-448P-201ENST00000517052 DPY19L2Q6NUT2 758 aa4.06□□□□□ -1.76
RNU6-448P-201ENST00000517052 ILDR1Q86SU0 546 aaPredicted RBP4.06□□□□□ -1.76
RNU6-448P-201ENST00000517052 G3V3G9 751 aa4.05□□□□□ -1.76
RNU6-448P-201ENST00000517052 GFRA3O60609 400 aa4.05□□□□□ -1.76
RNU6-448P-201ENST00000517052 DCAF8Q5TAQ9 597 aa4.05□□□□□ -1.76
RNU6-448P-201ENST00000517052 AXIN2Q9Y2T1 843 aa4.05□□□□□ -1.76
RNU6-448P-201ENST00000517052 GOLGA2Q08379 1002 aa4.04□□□□□ -1.76
RNU6-448P-201ENST00000517052 SUZ12Q15022 739 aaKnown RBP4.04□□□□□ -1.76
RNU6-448P-201ENST00000517052 ARSIQ5FYB1 569 aa4.04□□□□□ -1.76
RNU6-448P-201ENST00000517052 HRO43593 1189 aa4.03□□□□□ -1.76
RNU6-448P-201ENST00000517052 PLEKHG5O94827 1062 aa4.03□□□□□ -1.76
RNU6-448P-201ENST00000517052 STK17AQ9UEE5 414 aa4.02□□□□□ -1.77
RNU6-448P-201ENST00000517052 PTPN5P54829 565 aa4.01□□□□□ -1.77
RNU6-448P-201ENST00000517052 TK2O00142 265 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms