RNA–Protein interactions for RNA: ENST00000516986.1

RNU6-56P-201, Transcript of RNA, U6 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU6-56P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-56P-201ENST00000516986 ARID4BQ4LE39 1312 aaPredicted RBP4.11□□□□□ -1.75
RNU6-56P-201ENST00000516986 NPM3O75607 178 aaKnown RBP4.1□□□□□ -1.75
RNU6-56P-201ENST00000516986 SETQ01105 290 aaPredicted RBP4.1□□□□□ -1.75
RNU6-56P-201ENST00000516986 SPRYD3Q8NCJ5 442 aa4.1□□□□□ -1.75
RNU6-56P-201ENST00000516986 ZMYND15Q9H091 742 aa4.1□□□□□ -1.75
RNU6-56P-201ENST00000516986 ADRA2BP18089 450 aa4.09□□□□□ -1.75
RNU6-56P-201ENST00000516986 NCLP19338 710 aaKnown RBP4.09□□□□□ -1.75
RNU6-56P-201ENST00000516986 RAD21O60216 631 aa4.08□□□□□ -1.76
RNU6-56P-201ENST00000516986 CC2D2BQ6DHV5 1058 aa4.07□□□□□ -1.76
RNU6-56P-201ENST00000516986 KCTD17Q8N5Z5 321 aa4.07□□□□□ -1.76
RNU6-56P-201ENST00000516986 TSHZ2Q9NRE2 1034 aa4.07□□□□□ -1.76
RNU6-56P-201ENST00000516986 ZNF592Q92610 1267 aa4.06□□□□□ -1.76
RNU6-56P-201ENST00000516986 AAMPQ13685 434 aa4.05□□□□□ -1.76
RNU6-56P-201ENST00000516986 USP35Q9P2H5 1018 aa4.05□□□□□ -1.76
RNU6-56P-201ENST00000516986 PPP6R1Q9UPN7 881 aa4.05□□□□□ -1.76
RNU6-56P-201ENST00000516986 E9PSI1 815 aa4.04□□□□□ -1.76
RNU6-56P-201ENST00000516986 PPM1GO15355 546 aaPredicted RBP4.04□□□□□ -1.76
RNU6-56P-201ENST00000516986 NEFMP07197 916 aa4.04□□□□□ -1.76
RNU6-56P-201ENST00000516986 RBM25P49756 843 aaKnown RBP4.04□□□□□ -1.76
RNU6-56P-201ENST00000516986 CCDC136Q96JN2 1154 aa4.04□□□□□ -1.76
RNU6-56P-201ENST00000516986 PLCD4Q9BRC7 762 aa4.04□□□□□ -1.76
RNU6-56P-201ENST00000516986 A0A0U1RQG5 324 aaPredicted RBP4.03□□□□□ -1.76
RNU6-56P-201ENST00000516986 PTMAP06454 111 aaKnown RBP4.03□□□□□ -1.76
RNU6-56P-201ENST00000516986 CANXP27824 592 aaKnown RBP4.03□□□□□ -1.76
RNU6-56P-201ENST00000516986 PPP4R3CPQ6ZMV5 832 aa4.03□□□□□ -1.76
RNU6-56P-201ENST00000516986 SCAF1Q9H7N4 1312 aaKnown RBP4.02□□□□□ -1.77
RNU6-56P-201ENST00000516986 MCCP23508 829 aa4.02□□□□□ -1.77
RNU6-56P-201ENST00000516986 CERS3Q8IU89 383 aa4.02□□□□□ -1.77
RNU6-56P-201ENST00000516986 BRPF1P55201 1214 aaPredicted RBP4.01□□□□□ -1.77
RNU6-56P-201ENST00000516986 TMCO4Q5TGY1 634 aa4.01□□□□□ -1.77
RNU6-56P-201ENST00000516986 NECTIN2Q92692 538 aa4.01□□□□□ -1.77
RNU6-56P-201ENST00000516986 ANO8Q9HCE9 1232 aaPredicted RBP4.01□□□□□ -1.77
RNU6-56P-201ENST00000516986 NEUROD2Q15784 382 aa4□□□□□ -1.77
RNU6-56P-201ENST00000516986 TEX2Q8IWB9 1127 aa4□□□□□ -1.77
RNU6-56P-201ENST00000516986 FAM177A1Q8N128 213 aaPredicted RBP4□□□□□ -1.77
RNU6-56P-201ENST00000516986 RGS22Q8NE09 1264 aa4□□□□□ -1.77
RNU6-56P-201ENST00000516986 ZFP91Q96JP5 570 aaPredicted RBP4□□□□□ -1.77
RNU6-56P-201ENST00000516986 DNAJC5Q9H3Z4 198 aa4□□□□□ -1.77
RNU6-56P-201ENST00000516986 HMGB1P1B2RPK0 211 aaPredicted RBP3.99□□□□□ -1.77
RNU6-56P-201ENST00000516986 RTL5Q5HYW3 569 aaPredicted RBP3.99□□□□□ -1.77
RNU6-56P-201ENST00000516986 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.99□□□□□ -1.77
RNU6-56P-201ENST00000516986 CWC22Q9HCG8 908 aaKnown RBP3.99□□□□□ -1.77
RNU6-56P-201ENST00000516986 MTMR7Q9Y216 660 aa3.99□□□□□ -1.77
RNU6-56P-201ENST00000516986 BRPF3Q9ULD4 1205 aa3.98□□□□□ -1.77
RNU6-56P-201ENST00000516986 APBB1O00213 710 aa3.97□□□□□ -1.77
RNU6-56P-201ENST00000516986 MAFGO15525 162 aa3.97□□□□□ -1.77
RNU6-56P-201ENST00000516986 RBM10P98175 930 aaKnown RBP3.97□□□□□ -1.77
RNU6-56P-201ENST00000516986 ANAPC15P60006 121 aa3.96□□□□□ -1.78
RNU6-56P-201ENST00000516986 PKD2Q13563 968 aa3.96□□□□□ -1.78
RNU6-56P-201ENST00000516986 HSP90AB4PQ58FF6 505 aa3.96□□□□□ -1.78
RNU6-56P-201ENST00000516986 AEBP1Q8IUX7 1158 aa3.96□□□□□ -1.78
RNU6-56P-201ENST00000516986 ZNF526Q8TF50 670 aaPredicted RBP3.96□□□□□ -1.78
RNU6-56P-201ENST00000516986 DNAJC2Q99543 621 aaKnown RBP3.96□□□□□ -1.78
RNU6-56P-201ENST00000516986 MFAP1P55081 439 aaKnown RBP3.95□□□□□ -1.78
RNU6-56P-201ENST00000516986 CCDC27Q2M243 656 aa3.95□□□□□ -1.78
RNU6-56P-201ENST00000516986 GRIPAP1Q4V328 841 aa3.95□□□□□ -1.78
RNU6-56P-201ENST00000516986 GPATCH11Q8N954 259 aa3.95□□□□□ -1.78
RNU6-56P-201ENST00000516986 ZNF692Q9BU19 519 aaPredicted RBP3.95□□□□□ -1.78
RNU6-56P-201ENST00000516986 TRAIPQ9BWF2 469 aa3.95□□□□□ -1.78
RNU6-56P-201ENST00000516986 ATXN8OSP0DMR3 200 aa3.94□□□□□ -1.78
RNU6-56P-201ENST00000516986 IRX6P78412 446 aaPredicted RBP3.94□□□□□ -1.78
RNU6-56P-201ENST00000516986 CNPY4Q8N129 248 aa3.94□□□□□ -1.78
RNU6-56P-201ENST00000516986 IPO4Q8TEX9 1081 aaKnown RBP3.94□□□□□ -1.78
RNU6-56P-201ENST00000516986 CHRM1P11229 460 aaPredicted RBP3.93□□□□□ -1.78
RNU6-56P-201ENST00000516986 FOXD4L5Q5VV16 416 aaPredicted RBP3.93□□□□□ -1.78
RNU6-56P-201ENST00000516986 CCDC125Q86Z20 511 aa3.93□□□□□ -1.78
RNU6-56P-201ENST00000516986 EXOC8Q8IYI6 725 aa3.93□□□□□ -1.78
RNU6-56P-201ENST00000516986 FOXD4L4Q8WXT5 416 aaPredicted RBP3.93□□□□□ -1.78
RNU6-56P-201ENST00000516986 ANP32BQ92688 251 aaKnown RBP3.93□□□□□ -1.78
RNU6-56P-201ENST00000516986 PRDM16Q9HAZ2 1276 aa3.93□□□□□ -1.78
RNU6-56P-201ENST00000516986 PLEKHD1A6NEE1 506 aa3.92□□□□□ -1.78
RNU6-56P-201ENST00000516986 ECM2O94769 699 aaPredicted RBP3.92□□□□□ -1.78
RNU6-56P-201ENST00000516986 TMED8Q6PL24 325 aaPredicted RBP3.92□□□□□ -1.78
RNU6-56P-201ENST00000516986 ANKRD13AQ8IZ07 590 aa3.92□□□□□ -1.78
RNU6-56P-201ENST00000516986 SENP3Q9H4L4 574 aaPredicted RBP3.92□□□□□ -1.78
RNU6-56P-201ENST00000516986 ARID3CA6NKF2 412 aa3.91□□□□□ -1.78
RNU6-56P-201ENST00000516986 PHF14O94880 888 aa3.91□□□□□ -1.78
RNU6-56P-201ENST00000516986 DEKP35659 375 aaKnown RBP3.91□□□□□ -1.78
RNU6-56P-201ENST00000516986 VASPP50552 380 aaPredicted RBP3.91□□□□□ -1.78
RNU6-56P-201ENST00000516986 FTSJ3Q8IY81 847 aaKnown RBP3.91□□□□□ -1.78
RNU6-56P-201ENST00000516986 FBXW7Q969H0 707 aa3.91□□□□□ -1.78
RNU6-56P-201ENST00000516986 GZF1Q9H116 711 aaPredicted RBP3.91□□□□□ -1.78
RNU6-56P-201ENST00000516986 MYH16Q9H6N6 1097 aa3.91□□□□□ -1.78
RNU6-56P-201ENST00000516986 C1orf115Q9H7X2 142 aa3.91□□□□□ -1.78
RNU6-56P-201ENST00000516986 NAP1L2Q9ULW6 460 aaPredicted RBP3.91□□□□□ -1.78
RNU6-56P-201ENST00000516986 PATL2C9JE40 543 aaKnown RBP3.9□□□□□ -1.79
RNU6-56P-201ENST00000516986 CLGNO14967 610 aa3.9□□□□□ -1.79
RNU6-56P-201ENST00000516986 CNGB1Q14028 1251 aaPredicted RBP3.9□□□□□ -1.79
RNU6-56P-201ENST00000516986 LMOD2Q6P5Q4 547 aa3.9□□□□□ -1.79
RNU6-56P-201ENST00000516986 NOL8Q76FK4 1167 aaKnown RBP3.9□□□□□ -1.79
RNU6-56P-201ENST00000516986 WWC1Q8IX03 1113 aa3.9□□□□□ -1.79
RNU6-56P-201ENST00000516986 PRDM10Q9NQV6 1147 aa3.9□□□□□ -1.79
RNU6-56P-201ENST00000516986 LAS1LQ9Y4W2 734 aaKnown RBP3.9□□□□□ -1.79
RNU6-56P-201ENST00000516986 KDM4AO75164 1064 aa3.89□□□□□ -1.79
RNU6-56P-201ENST00000516986 ZNF428Q96B54 188 aa3.89□□□□□ -1.79
RNU6-56P-201ENST00000516986 WDR70Q9NW82 654 aa3.89□□□□□ -1.79
RNU6-56P-201ENST00000516986 CALRP27797 417 aaKnown RBP3.88□□□□□ -1.79
RNU6-56P-201ENST00000516986 FAM193AP78312 1265 aa3.88□□□□□ -1.79
RNU6-56P-201ENST00000516986 OS9Q13438 667 aaPredicted RBP3.88□□□□□ -1.79
RNU6-56P-201ENST00000516986 AXDND1Q5T1B0 1012 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms