RNA–Protein interactions for RNA: ENST00000516942.1

RNU6-143P-201, Transcript of RNA, U6 small nuclear 143, pseudogene, humanhuman

BASIC

Gene RNU6-143P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-143P-201ENST00000516942 PITPNM1O00562 1244 aa7.33□□□□□ -1.24
RNU6-143P-201ENST00000516942 PAXIP1Q6ZW49 1069 aaPredicted RBP7.33□□□□□ -1.24
RNU6-143P-201ENST00000516942 CLEC11AQ9Y240 323 aa7.33□□□□□ -1.24
RNU6-143P-201ENST00000516942 CHGAP10645 457 aaKnown RBP7.32□□□□□ -1.24
RNU6-143P-201ENST00000516942 SPRYD3Q8NCJ5 442 aa7.32□□□□□ -1.24
RNU6-143P-201ENST00000516942 RASEFQ8IZ41 740 aa7.31□□□□□ -1.24
RNU6-143P-201ENST00000516942 SGIP1Q9BQI5 828 aa7.31□□□□□ -1.24
RNU6-143P-201ENST00000516942 DCAF8Q5TAQ9 597 aa7.29□□□□□ -1.24
RNU6-143P-201ENST00000516942 RIOK3O14730 519 aaKnown RBP7.28□□□□□ -1.24
RNU6-143P-201ENST00000516942 NKX1-1Q15270 411 aaPredicted RBP7.28□□□□□ -1.24
RNU6-143P-201ENST00000516942 CFAP44Q96MT7 982 aa7.28□□□□□ -1.24
RNU6-143P-201ENST00000516942 FAM212AQ96EL1 285 aa7.27□□□□□ -1.25
RNU6-143P-201ENST00000516942 TSHZ2Q9NRE2 1034 aa7.27□□□□□ -1.25
RNU6-143P-201ENST00000516942 VGFO15240 615 aaPredicted RBP7.23□□□□□ -1.25
RNU6-143P-201ENST00000516942 GTPBP6O43824 516 aaPredicted RBP7.23□□□□□ -1.25
RNU6-143P-201ENST00000516942 BCANQ96GW7 911 aa7.22□□□□□ -1.25
RNU6-143P-201ENST00000516942 TAOK2Q9UL54 1235 aa7.22□□□□□ -1.25
RNU6-143P-201ENST00000516942 FXR2P51116 673 aaKnown RBP eCLIP7.2□□□□□ -1.26
RNU6-143P-201ENST00000516942 CHADLQ6NUI6 762 aa7.19□□□□□ -1.26
RNU6-143P-201ENST00000516942 FARP1Q9Y4F1 1045 aaPredicted RBP7.19□□□□□ -1.26
RNU6-143P-201ENST00000516942 PYGBP11216 843 aa7.18□□□□□ -1.26
RNU6-143P-201ENST00000516942 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.17□□□□□ -1.26
RNU6-143P-201ENST00000516942 ZFP91Q96JP5 570 aaPredicted RBP7.17□□□□□ -1.26
RNU6-143P-201ENST00000516942 STK25O00506 426 aa7.16□□□□□ -1.26
RNU6-143P-201ENST00000516942 CCDC61Q9Y6R9 512 aa7.15□□□□□ -1.26
RNU6-143P-201ENST00000516942 BCL11BQ9C0K0 894 aaPredicted RBP7.13□□□□□ -1.27
RNU6-143P-201ENST00000516942 PRKAR2AP13861 404 aaKnown RBP7.12□□□□□ -1.27
RNU6-143P-201ENST00000516942 TSPYL2Q9H2G4 693 aaPredicted RBP7.11□□□□□ -1.27
RNU6-143P-201ENST00000516942 ZNF467Q7Z7K2 595 aaPredicted RBP7.1□□□□□ -1.27
RNU6-143P-201ENST00000516942 STK24Q9Y6E0 443 aa7.1□□□□□ -1.27
RNU6-143P-201ENST00000516942 ZNF579Q8NAF0 562 aaKnown RBP7.09□□□□□ -1.27
RNU6-143P-201ENST00000516942 PRKCSHP14314 528 aaPredicted RBP7.08□□□□□ -1.28
RNU6-143P-201ENST00000516942 PDAP1Q13442 181 aaKnown RBP7.07□□□□□ -1.28
RNU6-143P-201ENST00000516942 PIP4P2Q8N4L2 257 aa7.07□□□□□ -1.28
RNU6-143P-201ENST00000516942 RYDENQ9NUL5 291 aaKnown RBP7.07□□□□□ -1.28
RNU6-143P-201ENST00000516942 CHRDL2Q6WN34 429 aa7.06□□□□□ -1.28
RNU6-143P-201ENST00000516942 PCDHB8Q9UN66 801 aa7.06□□□□□ -1.28
RNU6-143P-201ENST00000516942 PCDHB13Q9Y5F0 798 aa7.06□□□□□ -1.28
RNU6-143P-201ENST00000516942 KIF12Q96FN5 646 aa7.05□□□□□ -1.28
RNU6-143P-201ENST00000516942 PSEN1P49768 467 aa7.03□□□□□ -1.28
RNU6-143P-201ENST00000516942 MFRPQ9BY79 579 aa7.03□□□□□ -1.28
RNU6-143P-201ENST00000516942 IFNL1Q8IU54 200 aa7.02□□□□□ -1.29
RNU6-143P-201ENST00000516942 MAP3K13O43283 966 aa7.01□□□□□ -1.29
RNU6-143P-201ENST00000516942 FBXO22Q8NEZ5 403 aa7□□□□□ -1.29
RNU6-143P-201ENST00000516942 CADPS2Q86UW7 1296 aa6.99□□□□□ -1.29
RNU6-143P-201ENST00000516942 TPRNQ4KMQ1 711 aa6.98□□□□□ -1.29
RNU6-143P-201ENST00000516942 SOX12O15370 315 aa6.96□□□□□ -1.3
RNU6-143P-201ENST00000516942 PPP1R37O75864 691 aa6.95□□□□□ -1.3
RNU6-143P-201ENST00000516942 PAK3O75914 559 aaPredicted RBP6.95□□□□□ -1.3
RNU6-143P-201ENST00000516942 EFCAB3Q8N7B9 438 aa6.95□□□□□ -1.3
RNU6-143P-201ENST00000516942 NBR1Q14596 966 aa6.93□□□□□ -1.3
RNU6-143P-201ENST00000516942 C19orf67A6NJJ6 358 aa6.92□□□□□ -1.3
RNU6-143P-201ENST00000516942 CD44P16070 742 aaKnown RBP6.92□□□□□ -1.3
RNU6-143P-201ENST00000516942 NLRP6P59044 892 aa6.92□□□□□ -1.3
RNU6-143P-201ENST00000516942 ZRANB1Q9UGI0 708 aa6.92□□□□□ -1.3
RNU6-143P-201ENST00000516942 ILDR1Q86SU0 546 aaPredicted RBP6.91□□□□□ -1.3
RNU6-143P-201ENST00000516942 MS4A4AQ96JQ5 239 aa6.91□□□□□ -1.3
RNU6-143P-201ENST00000516942 PHF8Q9UPP1 1060 aa6.91□□□□□ -1.3
RNU6-143P-201ENST00000516942 PHF12Q96QT6 1004 aa6.9□□□□□ -1.3
RNU6-143P-201ENST00000516942 CABP2Q9NPB3 220 aa6.9□□□□□ -1.3
RNU6-143P-201ENST00000516942 KCNV2Q8TDN2 545 aa6.89□□□□□ -1.31
RNU6-143P-201ENST00000516942 P3H3Q8IVL6 736 aa6.88□□□□□ -1.31
RNU6-143P-201ENST00000516942 TRPC6Q9Y210 931 aa6.88□□□□□ -1.31
RNU6-143P-201ENST00000516942 NCKAP5LQ9HCH0 1330 aa6.85□□□□□ -1.31
RNU6-143P-201ENST00000516942 MS4A3Q96HJ5 214 aa6.85□□□□□ -1.31
RNU6-143P-201ENST00000516942 MFSD10Q14728 455 aa6.84□□□□□ -1.31
RNU6-143P-201ENST00000516942 ARHGEF1Q92888 912 aaKnown RBP6.84□□□□□ -1.31
RNU6-143P-201ENST00000516942 WDR70Q9NW82 654 aa6.84□□□□□ -1.31
RNU6-143P-201ENST00000516942 TIE1P35590 1138 aa6.83□□□□□ -1.32
RNU6-143P-201ENST00000516942 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.83□□□□□ -1.32
RNU6-143P-201ENST00000516942 TMEM106CQ9BVX2 250 aa6.83□□□□□ -1.32
RNU6-143P-201ENST00000516942 CRISPLD2Q9H0B8 497 aa6.83□□□□□ -1.32
RNU6-143P-201ENST00000516942 ARIH1Q9Y4X5 557 aaPredicted RBP6.83□□□□□ -1.32
RNU6-143P-201ENST00000516942 TTLL13PA6NNM8 815 aa6.81□□□□□ -1.32
RNU6-143P-201ENST00000516942 E2F4Q16254 413 aa6.8□□□□□ -1.32
RNU6-143P-201ENST00000516942 PDE4AP27815 886 aa6.79□□□□□ -1.32
RNU6-143P-201ENST00000516942 CAMK2BQ13554 666 aa6.79□□□□□ -1.32
RNU6-143P-201ENST00000516942 BMP2KQ9NSY1 1161 aaPredicted RBP6.79□□□□□ -1.32
RNU6-143P-201ENST00000516942 EVX2Q03828 476 aa6.78□□□□□ -1.32
RNU6-143P-201ENST00000516942 CLCN6P51797 869 aa6.77□□□□□ -1.33
RNU6-143P-201ENST00000516942 TESPA1A2RU30 521 aaPredicted RBP6.76□□□□□ -1.33
RNU6-143P-201ENST00000516942 LARP6Q9BRS8 491 aaKnown RBP6.76□□□□□ -1.33
RNU6-143P-201ENST00000516942 GALR2O43603 387 aaPredicted RBP6.75□□□□□ -1.33
RNU6-143P-201ENST00000516942 MKRN3Q13064 507 aaKnown RBP6.75□□□□□ -1.33
RNU6-143P-201ENST00000516942 LMOD2Q6P5Q4 547 aa6.74□□□□□ -1.33
RNU6-143P-201ENST00000516942 SEMA3EO15041 775 aa6.73□□□□□ -1.33
RNU6-143P-201ENST00000516942 TMEM121BQ9BXQ6 578 aaPredicted RBP6.73□□□□□ -1.33
RNU6-143P-201ENST00000516942 GPHNQ9NQX3 736 aaPredicted RBP6.73□□□□□ -1.33
RNU6-143P-201ENST00000516942 TRIM35Q9UPQ4 493 aa6.73□□□□□ -1.33
RNU6-143P-201ENST00000516942 GOLGA2Q08379 1002 aa6.72□□□□□ -1.33
RNU6-143P-201ENST00000516942 DPY19L2Q6NUT2 758 aa6.72□□□□□ -1.33
RNU6-143P-201ENST00000516942 PDCD7Q8N8D1 485 aaKnown RBP6.72□□□□□ -1.33
RNU6-143P-201ENST00000516942 DDX27Q96GQ7 796 aaKnown RBP6.72□□□□□ -1.33
RNU6-143P-201ENST00000516942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.72□□□□□ -1.33
RNU6-143P-201ENST00000516942 IRX5P78411 483 aaPredicted RBP6.71□□□□□ -1.34
RNU6-143P-201ENST00000516942 ASTLQ6HA08 431 aaPredicted RBP6.71□□□□□ -1.34
RNU6-143P-201ENST00000516942 ATMINO43313 823 aaPredicted RBP6.7□□□□□ -1.34
RNU6-143P-201ENST00000516942 ATN1P54259 1190 aaPredicted RBP6.7□□□□□ -1.34
RNU6-143P-201ENST00000516942 ZC3H15Q8WU90 426 aaKnown RBP6.69□□□□□ -1.34
RNU6-143P-201ENST00000516942 KIF3CO14782 793 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms