RNA–Protein interactions for RNA: ENST00000516881.1

SCARNA15-202, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-202ENST00000516881 METRNQ9UJH8 293 aa5.67□□□□□ -1.5
SCARNA15-202ENST00000516881 ATMINO43313 823 aaPredicted RBP5.65□□□□□ -1.5
SCARNA15-202ENST00000516881 SLC39A7Q92504 469 aa5.65□□□□□ -1.5
SCARNA15-202ENST00000516881 POTEMA6NI47 508 aa5.64□□□□□ -1.51
SCARNA15-202ENST00000516881 C7P10643 843 aa5.64□□□□□ -1.51
SCARNA15-202ENST00000516881 ASTLQ6HA08 431 aaPredicted RBP5.64□□□□□ -1.51
SCARNA15-202ENST00000516881 POTEGQ6S5H5 508 aa5.62□□□□□ -1.51
SCARNA15-202ENST00000516881 ATN1P54259 1190 aaPredicted RBP5.61□□□□□ -1.51
SCARNA15-202ENST00000516881 CCDC61Q9Y6R9 512 aa5.61□□□□□ -1.51
SCARNA15-202ENST00000516881 MAMSTRQ6ZN01 415 aa5.6□□□□□ -1.51
SCARNA15-202ENST00000516881 PLCD3Q8N3E9 789 aa5.6□□□□□ -1.51
SCARNA15-202ENST00000516881 KIF12Q96FN5 646 aa5.6□□□□□ -1.51
SCARNA15-202ENST00000516881 FAM163AQ96GL9 167 aaPredicted RBP5.6□□□□□ -1.51
SCARNA15-202ENST00000516881 MAP3K13O43283 966 aa5.59□□□□□ -1.51
SCARNA15-202ENST00000516881 POTEJP0CG39 1038 aa5.59□□□□□ -1.51
SCARNA15-202ENST00000516881 PROM2Q8N271 834 aa5.59□□□□□ -1.51
SCARNA15-202ENST00000516881 SCUBE2Q9NQ36 999 aa5.59□□□□□ -1.51
SCARNA15-202ENST00000516881 SEC24BO95487 1268 aa5.58□□□□□ -1.52
SCARNA15-202ENST00000516881 RASEFQ8IZ41 740 aa5.58□□□□□ -1.52
SCARNA15-202ENST00000516881 BMP2KQ9NSY1 1161 aaPredicted RBP5.58□□□□□ -1.52
SCARNA15-202ENST00000516881 TRPC6Q9Y210 931 aa5.58□□□□□ -1.52
SCARNA15-202ENST00000516881 TTLL13PA6NNM8 815 aa5.53□□□□□ -1.52
SCARNA15-202ENST00000516881 TIE1P35590 1138 aa5.53□□□□□ -1.52
SCARNA15-202ENST00000516881 PCDHB13Q9Y5F0 798 aa5.53□□□□□ -1.52
SCARNA15-202ENST00000516881 ZBTB47Q9UFB7 747 aaPredicted RBP5.52□□□□□ -1.53
SCARNA15-202ENST00000516881 POTEFA5A3E0 1075 aa5.51□□□□□ -1.53
SCARNA15-202ENST00000516881 TRIM35Q9UPQ4 493 aa5.51□□□□□ -1.53
SCARNA15-202ENST00000516881 COLQQ9Y215 455 aaPredicted RBP5.51□□□□□ -1.53
SCARNA15-202ENST00000516881 PCDH10Q9P2E7 1040 aa5.5□□□□□ -1.53
SCARNA15-202ENST00000516881 FAM212AQ96EL1 285 aa5.49□□□□□ -1.53
SCARNA15-202ENST00000516881 FKBP8Q14318 412 aa5.48□□□□□ -1.53
SCARNA15-202ENST00000516881 TMEM106CQ9BVX2 250 aa5.48□□□□□ -1.53
SCARNA15-202ENST00000516881 NUBP1P53384 320 aa5.47□□□□□ -1.53
SCARNA15-202ENST00000516881 LCE2DQ5TA82 110 aaPredicted RBP5.47□□□□□ -1.53
SCARNA15-202ENST00000516881 IFNL1Q8IU54 200 aa5.47□□□□□ -1.53
SCARNA15-202ENST00000516881 PLCG2P16885 1265 aa5.46□□□□□ -1.54
SCARNA15-202ENST00000516881 DCAF8Q5TAQ9 597 aa5.46□□□□□ -1.54
SCARNA15-202ENST00000516881 SLAIN1Q8ND83 568 aa5.46□□□□□ -1.54
SCARNA15-202ENST00000516881 SGIP1Q9BQI5 828 aa5.46□□□□□ -1.54
SCARNA15-202ENST00000516881 PYGBP11216 843 aa5.44□□□□□ -1.54
SCARNA15-202ENST00000516881 IER5LQ5T953 404 aa5.44□□□□□ -1.54
SCARNA15-202ENST00000516881 CDAN1Q8IWY9 1227 aa5.43□□□□□ -1.54
SCARNA15-202ENST00000516881 ST18O60284 1047 aa5.4□□□□□ -1.54
SCARNA15-202ENST00000516881 KLHL34Q8N239 644 aa5.4□□□□□ -1.54
SCARNA15-202ENST00000516881 PCDHB8Q9UN66 801 aa5.4□□□□□ -1.54
SCARNA15-202ENST00000516881 IRX5P78411 483 aaPredicted RBP5.38□□□□□ -1.55
SCARNA15-202ENST00000516881 GOLGA2Q08379 1002 aa5.38□□□□□ -1.55
SCARNA15-202ENST00000516881 OCEL1Q9H607 264 aa5.38□□□□□ -1.55
SCARNA15-202ENST00000516881 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.37□□□□□ -1.55
SCARNA15-202ENST00000516881 FBXO3Q9UK99 471 aa5.37□□□□□ -1.55
SCARNA15-202ENST00000516881 MKRN3Q13064 507 aaKnown RBP5.34□□□□□ -1.55
SCARNA15-202ENST00000516881 MARVELD3Q96A59 401 aa5.34□□□□□ -1.55
SCARNA15-202ENST00000516881 SNPHO15079 494 aa5.33□□□□□ -1.56
SCARNA15-202ENST00000516881 GSE1Q14687 1217 aa5.33□□□□□ -1.56
SCARNA15-202ENST00000516881 C3orf67Q6ZVT6 689 aa5.33□□□□□ -1.56
SCARNA15-202ENST00000516881 ZNF467Q7Z7K2 595 aaPredicted RBP5.31□□□□□ -1.56
SCARNA15-202ENST00000516881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.31□□□□□ -1.56
SCARNA15-202ENST00000516881 VASPP50552 380 aaPredicted RBP5.3□□□□□ -1.56
SCARNA15-202ENST00000516881 TMEM121BQ9BXQ6 578 aaPredicted RBP5.3□□□□□ -1.56
SCARNA15-202ENST00000516881 PSEN1P49768 467 aa5.29□□□□□ -1.56
SCARNA15-202ENST00000516881 L3MBTL3Q96JM7 780 aaPredicted RBP5.29□□□□□ -1.56
SCARNA15-202ENST00000516881 CIZ1Q9ULV3 898 aaPredicted RBP5.29□□□□□ -1.56
SCARNA15-202ENST00000516881 G3V3G9 751 aa5.28□□□□□ -1.56
SCARNA15-202ENST00000516881 EMP3P54852 163 aa5.28□□□□□ -1.56
SCARNA15-202ENST00000516881 MMRN1Q13201 1228 aa5.27□□□□□ -1.57
SCARNA15-202ENST00000516881 SPNS2Q8IVW8 549 aa5.27□□□□□ -1.57
SCARNA15-202ENST00000516881 PDCD7Q8N8D1 485 aaKnown RBP5.27□□□□□ -1.57
SCARNA15-202ENST00000516881 FAM205CA6NFA0 338 aa5.26□□□□□ -1.57
SCARNA15-202ENST00000516881 CABP2Q9NPB3 220 aa5.25□□□□□ -1.57
SCARNA15-202ENST00000516881 PDAP1Q13442 181 aaKnown RBP5.24□□□□□ -1.57
SCARNA15-202ENST00000516881 DPY19L2Q6NUT2 758 aa5.24□□□□□ -1.57
SCARNA15-202ENST00000516881 CHRM1P11229 460 aaPredicted RBP5.23□□□□□ -1.57
SCARNA15-202ENST00000516881 SPOCK2Q92563 424 aa5.22□□□□□ -1.57
SCARNA15-202ENST00000516881 HS3ST6Q96QI5 342 aa5.22□□□□□ -1.57
SCARNA15-202ENST00000516881 ZNF710Q8N1W2 664 aa5.21□□□□□ -1.58
SCARNA15-202ENST00000516881 BOLA1Q9Y3E2 137 aa5.21□□□□□ -1.58
SCARNA15-202ENST00000516881 POTEB3A0JP26 581 aa5.19□□□□□ -1.58
SCARNA15-202ENST00000516881 POTEBQ6S5H4 581 aa5.19□□□□□ -1.58
SCARNA15-202ENST00000516881 IFNLR1Q8IU57 520 aaPredicted RBP5.19□□□□□ -1.58
SCARNA15-202ENST00000516881 KRTAP3-3Q9BYR6 98 aa5.17□□□□□ -1.58
SCARNA15-202ENST00000516881 KRTAP3-2Q9BYR7 98 aa5.17□□□□□ -1.58
SCARNA15-202ENST00000516881 ERBB3P21860 1342 aa5.17□□□□□ -1.58
SCARNA15-202ENST00000516881 EFCAB3Q8N7B9 438 aa5.16□□□□□ -1.58
SCARNA15-202ENST00000516881 DOK7Q18PE1 504 aa5.15□□□□□ -1.59
SCARNA15-202ENST00000516881 RIMBP2O15034 1052 aa5.14□□□□□ -1.59
SCARNA15-202ENST00000516881 HOXB3P14651 431 aaPredicted RBP5.14□□□□□ -1.59
SCARNA15-202ENST00000516881 ILDR1Q86SU0 546 aaPredicted RBP5.14□□□□□ -1.59
SCARNA15-202ENST00000516881 VARS2Q5ST30 1063 aaKnown RBP5.13□□□□□ -1.59
SCARNA15-202ENST00000516881 HOXB1P14653 301 aaPredicted RBP5.12□□□□□ -1.59
SCARNA15-202ENST00000516881 MICALL2Q8IY33 904 aa5.09□□□□□ -1.59
SCARNA15-202ENST00000516881 TRIM41Q8WV44 630 aa5.09□□□□□ -1.59
SCARNA15-202ENST00000516881 RNF166Q96A37 237 aaPredicted RBP5.09□□□□□ -1.59
SCARNA15-202ENST00000516881 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.07□□□□□ -1.6
SCARNA15-202ENST00000516881 RIOK3O14730 519 aaKnown RBP5.07□□□□□ -1.6
SCARNA15-202ENST00000516881 TMEM92Q6UXU6 159 aa5.07□□□□□ -1.6
SCARNA15-202ENST00000516881 ZFP91Q96JP5 570 aaPredicted RBP5.07□□□□□ -1.6
SCARNA15-202ENST00000516881 MYT1LQ9UL68 1186 aa5.07□□□□□ -1.6
SCARNA15-202ENST00000516881 PHF8Q9UPP1 1060 aa5.07□□□□□ -1.6
SCARNA15-202ENST00000516881 SOX12O15370 315 aa5.06□□□□□ -1.6
SCARNA15-202ENST00000516881 ARSIQ5FYB1 569 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms