RNA–Protein interactions for RNA: ENST00000516538.1

RNU6-1046P-201, Transcript of RNA, U6 small nuclear 1046, pseudogene, humanhuman

BASIC

Gene RNU6-1046P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1046P-201ENST00000516538 ASTLQ6HA08 431 aaPredicted RBP11□□□□□ -0.65
RNU6-1046P-201ENST00000516538 MAMSTRQ6ZN01 415 aa10.99□□□□□ -0.65
RNU6-1046P-201ENST00000516538 PELP1Q8IZL8 1130 aaKnown RBP10.99□□□□□ -0.65
RNU6-1046P-201ENST00000516538 ATMINO43313 823 aaPredicted RBP10.96□□□□□ -0.65
RNU6-1046P-201ENST00000516538 PLEKHG5O94827 1062 aa10.96□□□□□ -0.65
RNU6-1046P-201ENST00000516538 TSPYL2Q9H2G4 693 aaPredicted RBP10.96□□□□□ -0.65
RNU6-1046P-201ENST00000516538 POTEGQ6S5H5 508 aa10.95□□□□□ -0.66
RNU6-1046P-201ENST00000516538 SCUBE2Q9NQ36 999 aa10.92□□□□□ -0.66
RNU6-1046P-201ENST00000516538 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
RNU6-1046P-201ENST00000516538 CCDC61Q9Y6R9 512 aa10.88□□□□□ -0.67
RNU6-1046P-201ENST00000516538 PROM2Q8N271 834 aa10.86□□□□□ -0.67
RNU6-1046P-201ENST00000516538 ATN1P54259 1190 aaPredicted RBP10.85□□□□□ -0.67
RNU6-1046P-201ENST00000516538 KIF12Q96FN5 646 aa10.84□□□□□ -0.67
RNU6-1046P-201ENST00000516538 TIE1P35590 1138 aa10.8□□□□□ -0.68
RNU6-1046P-201ENST00000516538 MIER1Q8N108 512 aa10.8□□□□□ -0.68
RNU6-1046P-201ENST00000516538 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
RNU6-1046P-201ENST00000516538 BMP2KQ9NSY1 1161 aaPredicted RBP10.79□□□□□ -0.68
RNU6-1046P-201ENST00000516538 FAM163AQ96GL9 167 aaPredicted RBP10.77□□□□□ -0.69
RNU6-1046P-201ENST00000516538 MAP3K13O43283 966 aa10.76□□□□□ -0.69
RNU6-1046P-201ENST00000516538 SEC24BO95487 1268 aa10.76□□□□□ -0.69
RNU6-1046P-201ENST00000516538 RASEFQ8IZ41 740 aa10.72□□□□□ -0.69
RNU6-1046P-201ENST00000516538 PLCD3Q8N3E9 789 aa10.72□□□□□ -0.69
RNU6-1046P-201ENST00000516538 ZBTB47Q9UFB7 747 aaPredicted RBP10.72□□□□□ -0.69
RNU6-1046P-201ENST00000516538 TRPC6Q9Y210 931 aa10.7□□□□□ -0.7
RNU6-1046P-201ENST00000516538 TTLL13PA6NNM8 815 aa10.69□□□□□ -0.7
RNU6-1046P-201ENST00000516538 SGIP1Q9BQI5 828 aa10.69□□□□□ -0.7
RNU6-1046P-201ENST00000516538 IER5LQ5T953 404 aa10.68□□□□□ -0.7
RNU6-1046P-201ENST00000516538 POTEFA5A3E0 1075 aa10.67□□□□□ -0.7
RNU6-1046P-201ENST00000516538 LCE2DQ5TA82 110 aaPredicted RBP10.67□□□□□ -0.7
RNU6-1046P-201ENST00000516538 PCDHB13Q9Y5F0 798 aa10.67□□□□□ -0.7
RNU6-1046P-201ENST00000516538 TRIM35Q9UPQ4 493 aa10.65□□□□□ -0.7
RNU6-1046P-201ENST00000516538 COLQQ9Y215 455 aaPredicted RBP10.62□□□□□ -0.71
RNU6-1046P-201ENST00000516538 FAM212AQ96EL1 285 aa10.61□□□□□ -0.71
RNU6-1046P-201ENST00000516538 PLCG2P16885 1265 aa10.57□□□□□ -0.72
RNU6-1046P-201ENST00000516538 SLAIN1Q8ND83 568 aa10.56□□□□□ -0.72
RNU6-1046P-201ENST00000516538 CDAN1Q8IWY9 1227 aa10.55□□□□□ -0.72
RNU6-1046P-201ENST00000516538 TMEM106CQ9BVX2 250 aa10.55□□□□□ -0.72
RNU6-1046P-201ENST00000516538 NUBP1P53384 320 aa10.54□□□□□ -0.72
RNU6-1046P-201ENST00000516538 IFNL1Q8IU54 200 aa10.54□□□□□ -0.72
RNU6-1046P-201ENST00000516538 ST18O60284 1047 aa10.47□□□□□ -0.73
RNU6-1046P-201ENST00000516538 SNPHO15079 494 aa10.45□□□□□ -0.74
RNU6-1046P-201ENST00000516538 IRX5P78411 483 aaPredicted RBP10.43□□□□□ -0.74
RNU6-1046P-201ENST00000516538 DCAF8Q5TAQ9 597 aa10.43□□□□□ -0.74
RNU6-1046P-201ENST00000516538 OCEL1Q9H607 264 aa10.43□□□□□ -0.74
RNU6-1046P-201ENST00000516538 TMEM121BQ9BXQ6 578 aaPredicted RBP10.42□□□□□ -0.74
RNU6-1046P-201ENST00000516538 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.42□□□□□ -0.74
RNU6-1046P-201ENST00000516538 PYGBP11216 843 aa10.38□□□□□ -0.75
RNU6-1046P-201ENST00000516538 FKBP8Q14318 412 aa10.38□□□□□ -0.75
RNU6-1046P-201ENST00000516538 FBXO3Q9UK99 471 aa10.36□□□□□ -0.75
RNU6-1046P-201ENST00000516538 GOLGA2Q08379 1002 aa10.35□□□□□ -0.75
RNU6-1046P-201ENST00000516538 C3orf67Q6ZVT6 689 aa10.33□□□□□ -0.76
RNU6-1046P-201ENST00000516538 PCDHB8Q9UN66 801 aa10.32□□□□□ -0.76
RNU6-1046P-201ENST00000516538 ZNF467Q7Z7K2 595 aaPredicted RBP10.31□□□□□ -0.76
RNU6-1046P-201ENST00000516538 MKRN3Q13064 507 aaKnown RBP10.3□□□□□ -0.76
RNU6-1046P-201ENST00000516538 GSE1Q14687 1217 aa10.3□□□□□ -0.76
RNU6-1046P-201ENST00000516538 L3MBTL3Q96JM7 780 aaPredicted RBP10.29□□□□□ -0.76
RNU6-1046P-201ENST00000516538 MMRN1Q13201 1228 aa10.28□□□□□ -0.76
RNU6-1046P-201ENST00000516538 SPNS2Q8IVW8 549 aa10.27□□□□□ -0.77
RNU6-1046P-201ENST00000516538 KLHL34Q8N239 644 aa10.26□□□□□ -0.77
RNU6-1046P-201ENST00000516538 MARVELD3Q96A59 401 aa10.26□□□□□ -0.77
RNU6-1046P-201ENST00000516538 EMP3P54852 163 aa10.24□□□□□ -0.77
RNU6-1046P-201ENST00000516538 PDCD7Q8N8D1 485 aaKnown RBP10.22□□□□□ -0.77
RNU6-1046P-201ENST00000516538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.21□□□□□ -0.77
RNU6-1046P-201ENST00000516538 G3V3G9 751 aa10.19□□□□□ -0.78
RNU6-1046P-201ENST00000516538 PSEN1P49768 467 aa10.17□□□□□ -0.78
RNU6-1046P-201ENST00000516538 CHRM1P11229 460 aaPredicted RBP10.16□□□□□ -0.78
RNU6-1046P-201ENST00000516538 VASPP50552 380 aaPredicted RBP10.16□□□□□ -0.78
RNU6-1046P-201ENST00000516538 HS3ST6Q96QI5 342 aa10.13□□□□□ -0.79
RNU6-1046P-201ENST00000516538 FAM205CA6NFA0 338 aa10.12□□□□□ -0.79
RNU6-1046P-201ENST00000516538 PDAP1Q13442 181 aaKnown RBP10.12□□□□□ -0.79
RNU6-1046P-201ENST00000516538 ZNF710Q8N1W2 664 aa10.06□□□□□ -0.8
RNU6-1046P-201ENST00000516538 CABP2Q9NPB3 220 aa10.06□□□□□ -0.8
RNU6-1046P-201ENST00000516538 BOLA1Q9Y3E2 137 aa10.06□□□□□ -0.8
RNU6-1046P-201ENST00000516538 KRTAP3-3Q9BYR6 98 aa10.05□□□□□ -0.8
RNU6-1046P-201ENST00000516538 KRTAP3-2Q9BYR7 98 aa10.05□□□□□ -0.8
RNU6-1046P-201ENST00000516538 ILDR1Q86SU0 546 aaPredicted RBP10.04□□□□□ -0.8
RNU6-1046P-201ENST00000516538 DOK7Q18PE1 504 aa10.03□□□□□ -0.8
RNU6-1046P-201ENST00000516538 CIZ1Q9ULV3 898 aaPredicted RBP10.03□□□□□ -0.8
RNU6-1046P-201ENST00000516538 RIMBP2O15034 1052 aa10.01□□□□□ -0.81
RNU6-1046P-201ENST00000516538 SPOCK2Q92563 424 aa10.01□□□□□ -0.81
RNU6-1046P-201ENST00000516538 POTEB3A0JP26 581 aa10□□□□□ -0.81
RNU6-1046P-201ENST00000516538 DPY19L2Q6NUT2 758 aa10□□□□□ -0.81
RNU6-1046P-201ENST00000516538 POTEBQ6S5H4 581 aa10□□□□□ -0.81
RNU6-1046P-201ENST00000516538 ERBB3P21860 1342 aa9.99□□□□□ -0.81
RNU6-1046P-201ENST00000516538 HOXB1P14653 301 aaPredicted RBP9.98□□□□□ -0.81
RNU6-1046P-201ENST00000516538 HOXB3P14651 431 aaPredicted RBP9.97□□□□□ -0.81
RNU6-1046P-201ENST00000516538 TRIM41Q8WV44 630 aa9.93□□□□□ -0.82
RNU6-1046P-201ENST00000516538 RNF166Q96A37 237 aaPredicted RBP9.91□□□□□ -0.82
RNU6-1046P-201ENST00000516538 ZSWIM6Q9HCJ5 1215 aa9.88□□□□□ -0.83
RNU6-1046P-201ENST00000516538 VARS2Q5ST30 1063 aaKnown RBP9.87□□□□□ -0.83
RNU6-1046P-201ENST00000516538 IFNLR1Q8IU57 520 aaPredicted RBP9.87□□□□□ -0.83
RNU6-1046P-201ENST00000516538 EFCAB3Q8N7B9 438 aa9.86□□□□□ -0.83
RNU6-1046P-201ENST00000516538 MYT1LQ9UL68 1186 aa9.85□□□□□ -0.83
RNU6-1046P-201ENST00000516538 PTGER2P43116 358 aa9.84□□□□□ -0.83
RNU6-1046P-201ENST00000516538 MICALL2Q8IY33 904 aa9.83□□□□□ -0.84
RNU6-1046P-201ENST00000516538 ZNF687Q8N1G0 1237 aa9.81□□□□□ -0.84
RNU6-1046P-201ENST00000516538 SOX12O15370 315 aa9.8□□□□□ -0.84
RNU6-1046P-201ENST00000516538 RIOK3O14730 519 aaKnown RBP9.74□□□□□ -0.85
RNU6-1046P-201ENST00000516538 GPR153Q6NV75 609 aa9.74□□□□□ -0.85
RNU6-1046P-201ENST00000516538 TMEM92Q6UXU6 159 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms